RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 ZDHHC9Q9Y397 364 aa17.64■□□□□ 0.41
CRAMP1-206ENST00000468839 PSMD14O00487 310 aa17.63■□□□□ 0.41
CRAMP1-206ENST00000468839 NPM3O75607 178 aaKnown RBP17.63■□□□□ 0.41
CRAMP1-206ENST00000468839 WDHD1O75717 1129 aaPredicted RBP17.63■□□□□ 0.41
CRAMP1-206ENST00000468839 BRD1O95696 1058 aa17.63■□□□□ 0.41
CRAMP1-206ENST00000468839 POLR3DP05423 398 aaPredicted RBP17.63■□□□□ 0.41
CRAMP1-206ENST00000468839 STK11IPQ8N1F8 1099 aa17.63■□□□□ 0.41
CRAMP1-206ENST00000468839 ERICH2A1L162 156 aa17.62■□□□□ 0.41
CRAMP1-206ENST00000468839 PLCD1P51178 756 aa17.62■□□□□ 0.41
CRAMP1-206ENST00000468839 EVX2Q03828 476 aa17.62■□□□□ 0.41
CRAMP1-206ENST00000468839 WTAPQ15007 396 aa17.62■□□□□ 0.41
CRAMP1-206ENST00000468839 SEC23AQ15436 765 aa17.62■□□□□ 0.41
CRAMP1-206ENST00000468839 AGBL3Q8NEM8 1001 aa17.62■□□□□ 0.41
CRAMP1-206ENST00000468839 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
CRAMP1-206ENST00000468839 HPS5Q9UPZ3 1129 aa17.62■□□□□ 0.41
CRAMP1-206ENST00000468839 SIPA1L1O43166 1804 aa17.62■□□□□ 0.41
CRAMP1-206ENST00000468839 DHX16O60231 1041 aaKnown RBP17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 MMP14P50281 582 aa17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 RCAN1P53805 252 aa17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 CCT2P78371 535 aaKnown RBP17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 HMGN5P82970 282 aaKnown RBP17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 PKP1Q13835 747 aa17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 APOA5Q6Q788 366 aa17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 C16orf86Q6ZW13 317 aa17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 IQCA1Q86XH1 822 aa17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 NSUN7Q8NE18 718 aaKnown RBP17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 IDI2Q9BXS1 227 aa17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 ZNF287Q9HBT7 754 aa17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 WDR33Q9C0J8 1336 aaKnown RBP17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 NID2Q14112 1375 aa17.61■□□□□ 0.41
CRAMP1-206ENST00000468839 RANBP6O60518 1105 aaKnown RBP17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 RAD17O75943 681 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 CTDNEP1O95476 244 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 PDCP20941 246 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 SYT1P21579 422 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 CXCL9Q07325 125 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 ILDR2Q71H61 639 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 TTC6Q86TZ1 520 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 JDP2Q8WYK2 163 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 ZSCAN10Q96SZ4 725 aaPredicted RBP17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 UBAC1Q9BSL1 405 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 SENP2Q9HC62 589 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 DDX4Q9NQI0 724 aaKnown RBP17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 SAP30BPQ9UHR5 308 aaKnown RBP17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 HDAC9Q9UKV0 1011 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 MYH15Q9Y2K3 1946 aa17.6■□□□□ 0.41
CRAMP1-206ENST00000468839 CCDC69A6NI79 296 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 GOLGA8BA8MQT2 603 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 ZBTB43O43298 467 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 STX6O43752 255 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 PRDM1O75626 825 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 CFAP100Q494V2 611 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 CCDC178Q5BJE1 867 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 CIAPIN1Q6FI81 312 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 NFXL1Q6ZNB6 911 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 MTMR14Q8NCE2 650 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 DYNLL2Q96FJ2 89 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 GBP4Q96PP9 640 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 ZKSCAN3Q9BRR0 538 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 OSBPL5Q9H0X9 879 aaPredicted RBP17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 TCP11L1Q9NUJ3 509 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 TAOK2Q9UL54 1235 aa17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 NAP1L2Q9ULW6 460 aaPredicted RBP17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 GREB1LQ9C091 1923 aaPredicted RBP17.59■□□□□ 0.41
CRAMP1-206ENST00000468839 TNKSO95271 1327 aa17.58■□□□□ 0.4
CRAMP1-206ENST00000468839 MCM4P33991 863 aa17.58■□□□□ 0.4
CRAMP1-206ENST00000468839 CDK8P49336 464 aa17.58■□□□□ 0.4
CRAMP1-206ENST00000468839 RBM5P52756 815 aaKnown RBP eCLIP17.58■□□□□ 0.4
CRAMP1-206ENST00000468839 GABPAQ06546 454 aa17.58■□□□□ 0.4
CRAMP1-206ENST00000468839 TNIP1Q15025 636 aa17.58■□□□□ 0.4
CRAMP1-206ENST00000468839 LARP1BQ659C4 914 aaKnown RBP17.58■□□□□ 0.4
CRAMP1-206ENST00000468839 ANKS1AQ92625 1134 aa17.58■□□□□ 0.4
CRAMP1-206ENST00000468839 MKNK2Q9HBH9 465 aa17.58■□□□□ 0.4
CRAMP1-206ENST00000468839 NCOA5Q9HCD5 579 aaKnown RBP17.58■□□□□ 0.4
CRAMP1-206ENST00000468839 SLC12A7Q9Y666 1083 aa17.58■□□□□ 0.4
CRAMP1-206ENST00000468839 JAK2O60674 1132 aa17.57■□□□□ 0.4
CRAMP1-206ENST00000468839 METAP2P50579 478 aaKnown RBP eCLIP17.57■□□□□ 0.4
CRAMP1-206ENST00000468839 PICALMQ13492 652 aa17.57■□□□□ 0.4
CRAMP1-206ENST00000468839 PPP2R5BQ15173 497 aa17.57■□□□□ 0.4
CRAMP1-206ENST00000468839 ZNF444Q8N0Y2 327 aaPredicted RBP17.57■□□□□ 0.4
CRAMP1-206ENST00000468839 ENAHQ8N8S7 591 aaPredicted RBP17.57■□□□□ 0.4
CRAMP1-206ENST00000468839 KIF3AQ9Y496 699 aa17.57■□□□□ 0.4
CRAMP1-206ENST00000468839 PCDHAC2Q9Y5I4 1007 aa17.57■□□□□ 0.4
CRAMP1-206ENST00000468839 MYH4Q9Y623 1939 aa17.57■□□□□ 0.4
CRAMP1-206ENST00000468839 COL2A1P02458 1487 aaPredicted RBP17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 PTPDC1A2A3K4 754 aa17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 TSPY2A6NKD2 308 aa17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 ENTPD3O75355 529 aa17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 ZSCAN22P10073 491 aaPredicted RBP17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 RASA1P20936 1047 aa17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 TFAP4Q01664 338 aa17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 FAM47AQ5JRC9 791 aa17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 OGFOD1Q8N543 542 aa17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 RGS22Q8NE09 1264 aa17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 PRMT6Q96LA8 375 aaPredicted RBP17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 DHX36Q9H2U1 1008 aaKnown RBP17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 FAM217BQ9NTX9 383 aaPredicted RBP17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 FAM198AQ9UFP1 575 aa17.56■□□□□ 0.4
CRAMP1-206ENST00000468839 MTMR6Q9Y217 621 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms