RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PRDM11Q9NQV5 511 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 NAGPAQ9UK23 515 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 RRP7AQ9Y3A4 280 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 PIK3C2AO00443 1686 aa5.36□□□□□ -1.55
TMEM39A-204ENST00000468545 MAP2P11137 1827 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 NRKQ7Z2Y5 1582 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 KIAA0232Q92628 1395 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 USP19O94966 1318 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 FAM83GA6ND36 823 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 SHISA8B8ZZ34 492 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 APAF1O14727 1248 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 GHRHP01286 108 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 NEFMP07197 916 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 EIF2AK2P19525 551 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 IRS1P35568 1242 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 FGD1P98174 961 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 ATP2B2Q01814 1243 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 EAPPQ56P03 285 aaPredicted RBP5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 COL13A1Q5TAT6 717 aaPredicted RBP5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 MEX3CQ5U5Q3 659 aaKnown RBP5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 FAM35AQ86V20 835 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 NCAPG2Q86XI2 1143 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 GALNT12Q8IXK2 581 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 FBF1Q8TES7 1133 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 ANKRD24Q8TF21 1146 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 SPACA7Q96KW9 195 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 RBSNQ9H1K0 784 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 ENAMQ9NRM1 1142 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 NLRP2Q9NX02 1062 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 FRRS1LQ9P0K9 344 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 SALL4Q9UJQ4 1053 aa5.35□□□□□ -1.55
TMEM39A-204ENST00000468545 TRPM3Q9HCF6 1732 aaPredicted RBP5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 FLT4P35916 1363 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 PNPLA6Q8IY17 1366 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 MAPK8IP3Q9UPT6 1336 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 CPB1P15086 417 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 AMPD1P23109 780 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 PRKAR2BP31323 418 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 PERM1Q5SV97 790 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 NBPF6Q5VWK0 638 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 USPL1Q5W0Q7 1092 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 ALG1LQ6GMV1 187 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 HFE2Q6ZVN8 426 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 CHSY3Q70JA7 882 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 FBXO33Q7Z6M2 555 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 CEP120Q8N960 986 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 CCDC74AQ96AQ1 378 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 RUNDC1Q96C34 613 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 NBPF4Q96M43 638 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 PNNQ9H307 717 aaKnown RBP5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 BTG4Q9NY30 223 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 USP35Q9P2H5 1018 aa5.34□□□□□ -1.55
TMEM39A-204ENST00000468545 PHLPP1O60346 1717 aa5.34□□□□□ -1.56
TMEM39A-204ENST00000468545 ANKRD26Q9UPS8 1709 aa5.34□□□□□ -1.56
TMEM39A-204ENST00000468545 MED1Q15648 1581 aaPredicted RBP5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 IQSEC2Q5JU85 1478 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 J3QW42 95 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 POLR3DP05423 398 aaPredicted RBP5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 LDHBP07195 334 aaKnown RBP5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 PSAPL1Q6NUJ1 521 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 ELMSAN1Q6PJG2 1045 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 TOM1L2Q6ZVM7 507 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 TCP11L2Q8N4U5 519 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 RGS22Q8NE09 1264 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 SCARF2Q96GP6 870 aaPredicted RBP5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 BTBD6Q96KE9 485 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 PHACTR3Q96KR7 559 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 C8orf37Q96NL8 207 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 LPIN3Q9BQK8 851 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 NPHS2Q9NP85 383 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 STARD13Q9Y3M8 1113 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 NHSL1Q5SYE7 1610 aa5.33□□□□□ -1.56
TMEM39A-204ENST00000468545 INSRP06213 1382 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 JCADQ9P266 1359 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 ALS2Q96Q42 1657 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 PRPF40AO75400 957 aaKnown RBP5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 ALBP02768 609 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 RIPK4P57078 832 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 ATP11AP98196 1134 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 PEAR1Q5VY43 1037 aaPredicted RBP5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 C20orf204Q6ZNR8 217 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 MICALL1Q8N3F8 863 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 NEDD1Q8NHV4 660 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 TTC9Q92623 222 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 PLD4Q96BZ4 506 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 BCL2L13Q9BXK5 485 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 SMG9Q9H0W8 520 aaKnown RBP5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 PRDM6Q9NQX0 595 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 LATS2Q9NRM7 1088 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 AHDC1Q5TGY3 1603 aaPredicted RBP5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 SLIT3O75094 1523 aa5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 CDK12Q9NYV4 1490 aaPredicted RBP5.32□□□□□ -1.56
TMEM39A-204ENST00000468545 SMG6Q86US8 1419 aaKnown RBP5.31□□□□□ -1.56
TMEM39A-204ENST00000468545 PEAK1Q9H792 1746 aa5.31□□□□□ -1.56
TMEM39A-204ENST00000468545 M0R082 166 aa5.31□□□□□ -1.56
TMEM39A-204ENST00000468545 LILRB5O75023 590 aa5.31□□□□□ -1.56
TMEM39A-204ENST00000468545 RGS9O75916 674 aaPredicted RBP5.31□□□□□ -1.56
TMEM39A-204ENST00000468545 SMNDC1O75940 238 aaKnown RBP eCLIP5.31□□□□□ -1.56
TMEM39A-204ENST00000468545 CENPBP07199 599 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms