RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 FSD1Q9BTV5 496 aa31.33■■■□□ 2.61
PDCD4-205ENST00000467574 DNAJC18Q9H819 358 aa31.33■■■□□ 2.61
PDCD4-205ENST00000467574 PI4KBQ9UBF8 816 aa31.33■■■□□ 2.61
PDCD4-205ENST00000467574 FOXN1O15353 648 aa31.31■■■□□ 2.6
PDCD4-205ENST00000467574 PRKAB2O43741 272 aa31.31■■■□□ 2.6
PDCD4-205ENST00000467574 EVI5LQ96CN4 794 aa31.31■■■□□ 2.6
PDCD4-205ENST00000467574 DCP1AQ9NPI6 582 aaPredicted RBP31.31■■■□□ 2.6
PDCD4-205ENST00000467574 HERC5Q9UII4 1024 aaKnown RBP31.31■■■□□ 2.6
PDCD4-205ENST00000467574 PTPRFP10586 1907 aa31.31■■■□□ 2.6
PDCD4-205ENST00000467574 CENPBP07199 599 aaPredicted RBP31.3■■■□□ 2.6
PDCD4-205ENST00000467574 SLC4A8Q2Y0W8 1093 aa31.3■■■□□ 2.6
PDCD4-205ENST00000467574 AIDAQ96BJ3 306 aa31.3■■■□□ 2.6
PDCD4-205ENST00000467574 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.3■■■□□ 2.6
PDCD4-205ENST00000467574 RRP1BQ14684 758 aaKnown RBP31.29■■■□□ 2.6
PDCD4-205ENST00000467574 ERO1BQ86YB8 467 aa31.29■■■□□ 2.6
PDCD4-205ENST00000467574 REM2Q8IYK8 340 aaPredicted RBP31.29■■■□□ 2.6
PDCD4-205ENST00000467574 OTUD5Q96G74 571 aa31.29■■■□□ 2.6
PDCD4-205ENST00000467574 M0R2C6 588 aa31.28■■■□□ 2.6
PDCD4-205ENST00000467574 LRRFIP1Q32MZ4 808 aaKnown RBP31.28■■■□□ 2.6
PDCD4-205ENST00000467574 ZMYM1Q5SVZ6 1142 aa31.28■■■□□ 2.6
PDCD4-205ENST00000467574 STRBPQ96SI9 672 aaKnown RBP31.28■■■□□ 2.6
PDCD4-205ENST00000467574 HLA-DOAP06340 250 aa31.27■■■□□ 2.6
PDCD4-205ENST00000467574 TM4SF4P48230 202 aa31.27■■■□□ 2.6
PDCD4-205ENST00000467574 SCYL3Q8IZE3 742 aa31.27■■■□□ 2.6
PDCD4-205ENST00000467574 MYH8P13535 1937 aa31.27■■■□□ 2.6
PDCD4-205ENST00000467574 MANSC4A6NHS7 340 aaPredicted RBP31.26■■■□□ 2.59
PDCD4-205ENST00000467574 CTNND1O60716 968 aaKnown RBP31.26■■■□□ 2.59
PDCD4-205ENST00000467574 EVX2Q03828 476 aa31.26■■■□□ 2.59
PDCD4-205ENST00000467574 FOXP4Q8IVH2 680 aaPredicted RBP31.26■■■□□ 2.59
PDCD4-205ENST00000467574 MS4A4AQ96JQ5 239 aa31.26■■■□□ 2.59
PDCD4-205ENST00000467574 SEC62Q99442 399 aaKnown RBP31.26■■■□□ 2.59
PDCD4-205ENST00000467574 EHD4Q9H223 541 aa31.26■■■□□ 2.59
PDCD4-205ENST00000467574 ATP8A2Q9NTI2 1148 aa31.26■■■□□ 2.59
PDCD4-205ENST00000467574 GPAA1O43292 621 aa31.25■■■□□ 2.59
PDCD4-205ENST00000467574 PLCD1P51178 756 aa31.25■■■□□ 2.59
PDCD4-205ENST00000467574 SREBF2Q12772 1141 aa31.25■■■□□ 2.59
PDCD4-205ENST00000467574 PPIL2Q13356 520 aa31.25■■■□□ 2.59
PDCD4-205ENST00000467574 MCM9Q9NXL9 1143 aa31.25■■■□□ 2.59
PDCD4-205ENST00000467574 SLC4A4Q9Y6R1 1079 aa31.25■■■□□ 2.59
PDCD4-205ENST00000467574 PPATQ06203 517 aa31.24■■■□□ 2.59
PDCD4-205ENST00000467574 BEGAINQ9BUH8 593 aa31.24■■■□□ 2.59
PDCD4-205ENST00000467574 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.24■■■□□ 2.59
PDCD4-205ENST00000467574 TESPA1A2RU30 521 aaPredicted RBP31.23■■■□□ 2.59
PDCD4-205ENST00000467574 IRF6O14896 467 aa31.23■■■□□ 2.59
PDCD4-205ENST00000467574 CA12O43570 354 aa31.23■■■□□ 2.59
PDCD4-205ENST00000467574 TTC6Q86TZ1 520 aa31.23■■■□□ 2.59
PDCD4-205ENST00000467574 CRACR2BQ8N4Y2 399 aaPredicted RBP31.23■■■□□ 2.59
PDCD4-205ENST00000467574 RNF186Q9NXI6 227 aa31.23■■■□□ 2.59
PDCD4-205ENST00000467574 SERPINB13Q9UIV8 391 aa31.23■■■□□ 2.59
PDCD4-205ENST00000467574 CYP2D6P10635 497 aa31.22■■■□□ 2.59
PDCD4-205ENST00000467574 HSPA8P11142 646 aaKnown RBP31.22■■■□□ 2.59
PDCD4-205ENST00000467574 PTPRAP18433 802 aa31.22■■■□□ 2.59
PDCD4-205ENST00000467574 GABPAQ06546 454 aa31.22■■■□□ 2.59
PDCD4-205ENST00000467574 CENPQQ7L2Z9 268 aaPredicted RBP31.22■■■□□ 2.59
PDCD4-205ENST00000467574 TICAM2Q86XR7 235 aa31.22■■■□□ 2.59
PDCD4-205ENST00000467574 SAGE1Q9NXZ1 904 aa31.22■■■□□ 2.59
PDCD4-205ENST00000467574 GSG1L2A8MUP6 293 aa31.21■■■□□ 2.59
PDCD4-205ENST00000467574 TRIM6-TRIM34B2RNG4 842 aa31.21■■■□□ 2.59
PDCD4-205ENST00000467574 CAP2P40123 477 aa31.21■■■□□ 2.59
PDCD4-205ENST00000467574 PICK1Q9NRD5 415 aa31.21■■■□□ 2.59
PDCD4-205ENST00000467574 TSKSQ9UJT2 592 aa31.21■■■□□ 2.59
PDCD4-205ENST00000467574 KCNH4Q9UQ05 1017 aa31.21■■■□□ 2.59
PDCD4-205ENST00000467574 IGF2BP3O00425 579 aaKnown RBP eCLIP31.2■■■□□ 2.59
PDCD4-205ENST00000467574 POLR3DP05423 398 aaPredicted RBP31.2■■■□□ 2.59
PDCD4-205ENST00000467574 NEFLP07196 543 aa31.2■■■□□ 2.59
PDCD4-205ENST00000467574 GSPT1P15170 499 aaKnown RBP31.2■■■□□ 2.59
PDCD4-205ENST00000467574 CTCFP49711 727 aaPredicted RBP31.2■■■□□ 2.59
PDCD4-205ENST00000467574 JAG1P78504 1218 aa31.2■■■□□ 2.59
PDCD4-205ENST00000467574 SHROOM1Q2M3G4 852 aaPredicted RBP31.2■■■□□ 2.59
PDCD4-205ENST00000467574 BRI3BPQ8WY22 251 aa31.2■■■□□ 2.59
PDCD4-205ENST00000467574 PTPN18Q99952 460 aa31.2■■■□□ 2.59
PDCD4-205ENST00000467574 EPB41L4AQ9HCS5 686 aaPredicted RBP31.2■■■□□ 2.59
PDCD4-205ENST00000467574 SMIM22K7EJ46 135 aa31.19■■■□□ 2.58
PDCD4-205ENST00000467574 GTF2A2P52657 109 aa31.19■■■□□ 2.58
PDCD4-205ENST00000467574 INHBEP58166 350 aa31.19■■■□□ 2.58
PDCD4-205ENST00000467574 TTC22Q5TAA0 569 aa31.19■■■□□ 2.58
PDCD4-205ENST00000467574 TATDN1Q6P1N9 297 aa31.19■■■□□ 2.58
PDCD4-205ENST00000467574 IFNL1Q8IU54 200 aa31.19■■■□□ 2.58
PDCD4-205ENST00000467574 RILPL2Q969X0 211 aa31.19■■■□□ 2.58
PDCD4-205ENST00000467574 TRIM34Q9BYJ4 488 aa31.19■■■□□ 2.58
PDCD4-205ENST00000467574 A0A0D9SFI3 127 aa31.18■■■□□ 2.58
PDCD4-205ENST00000467574 SHMT1P34896 483 aa31.18■■■□□ 2.58
PDCD4-205ENST00000467574 CCDC84Q86UT8 332 aaPredicted RBP31.18■■■□□ 2.58
PDCD4-205ENST00000467574 FAM227BQ96M60 508 aa31.18■■■□□ 2.58
PDCD4-205ENST00000467574 CYP2D7A0A087X1C5 515 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 CCL15-CCL14A0A0B4J2E2 113 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 USP17L12C9JPN9 530 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 USP17L21D6R901 530 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 TRPA1O75762 1119 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 GNAT2P19087 354 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 SNAPC2Q13487 334 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 CCL15Q16663 113 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 C12orf60Q5U649 245 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 GIMAP6Q6P9H5 292 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 CCDC129Q6ZRS4 1044 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 ZHX2Q9Y6X8 837 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 CASP8AP2Q9UKL3 1982 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 LOC285556D6RIA3 1793 aa31.17■■■□□ 2.58
PDCD4-205ENST00000467574 FOXP2O15409 715 aa31.16■■■□□ 2.58
PDCD4-205ENST00000467574 CTR9Q6PD62 1173 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms