RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 EFCC1Q9HA90 598 aa19.41■□□□□ 0.7
COL16A1-207ENST00000466829 ZCCHC17Q9NP64 241 aaKnown RBP19.41■□□□□ 0.7
COL16A1-207ENST00000466829 KCNH4Q9UQ05 1017 aa19.41■□□□□ 0.7
COL16A1-207ENST00000466829 PDHXO00330 501 aa19.4■□□□□ 0.7
COL16A1-207ENST00000466829 CXCL11O14625 94 aa19.4■□□□□ 0.7
COL16A1-207ENST00000466829 USP5P45974 858 aa19.4■□□□□ 0.7
COL16A1-207ENST00000466829 SOX10P56693 466 aa19.4■□□□□ 0.7
COL16A1-207ENST00000466829 DYNLL1P63167 89 aaKnown RBP19.4■□□□□ 0.7
COL16A1-207ENST00000466829 MAP3K10Q02779 954 aa19.4■□□□□ 0.7
COL16A1-207ENST00000466829 KIF22Q14807 665 aa19.4■□□□□ 0.7
COL16A1-207ENST00000466829 GADL1Q6ZQY3 521 aa19.4■□□□□ 0.7
COL16A1-207ENST00000466829 OTOP1Q7RTM1 612 aa19.4■□□□□ 0.7
COL16A1-207ENST00000466829 ANKRD23Q86SG2 305 aa19.4■□□□□ 0.7
COL16A1-207ENST00000466829 CRACR2BQ8N4Y2 399 aaPredicted RBP19.4■□□□□ 0.7
COL16A1-207ENST00000466829 DHX36Q9H2U1 1008 aaKnown RBP19.4■□□□□ 0.7
COL16A1-207ENST00000466829 PI4KBQ9UBF8 816 aa19.4■□□□□ 0.7
COL16A1-207ENST00000466829 SAP30BPQ9UHR5 308 aaKnown RBP19.4■□□□□ 0.7
COL16A1-207ENST00000466829 TLR2O60603 784 aa19.39■□□□□ 0.69
COL16A1-207ENST00000466829 FASTKD5Q7L8L6 764 aaKnown RBP19.39■□□□□ 0.69
COL16A1-207ENST00000466829 DCTPP1Q9H773 170 aa19.39■□□□□ 0.69
COL16A1-207ENST00000466829 TRIM75PA6NK02 468 aa19.38■□□□□ 0.69
COL16A1-207ENST00000466829 GOLIM4O00461 696 aa19.38■□□□□ 0.69
COL16A1-207ENST00000466829 ECM2O94769 699 aaPredicted RBP19.38■□□□□ 0.69
COL16A1-207ENST00000466829 HLA-DOAP06340 250 aa19.38■□□□□ 0.69
COL16A1-207ENST00000466829 FLT1P17948 1338 aa19.38■□□□□ 0.69
COL16A1-207ENST00000466829 MLLT1Q03111 559 aaPredicted RBP19.38■□□□□ 0.69
COL16A1-207ENST00000466829 SLC4A8Q2Y0W8 1093 aa19.38■□□□□ 0.69
COL16A1-207ENST00000466829 CERS3Q8IU89 383 aa19.38■□□□□ 0.69
COL16A1-207ENST00000466829 LRRCC1Q9C099 1032 aa19.38■□□□□ 0.69
COL16A1-207ENST00000466829 HERC5Q9UII4 1024 aaKnown RBP19.38■□□□□ 0.69
COL16A1-207ENST00000466829 PALD1Q9ULE6 856 aa19.38■□□□□ 0.69
COL16A1-207ENST00000466829 SLC9C2Q5TAH2 1124 aa19.37■□□□□ 0.69
COL16A1-207ENST00000466829 CCDC84Q86UT8 332 aaPredicted RBP19.37■□□□□ 0.69
COL16A1-207ENST00000466829 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.37■□□□□ 0.69
COL16A1-207ENST00000466829 CPA4Q9UI42 421 aa19.37■□□□□ 0.69
COL16A1-207ENST00000466829 AFG3L2Q9Y4W6 797 aa19.37■□□□□ 0.69
COL16A1-207ENST00000466829 PARK7Q99497 189 aaKnown RBP19.36■□□□□ 0.69
COL16A1-207ENST00000466829 BOLA2Q9H3K6 86 aa19.36■□□□□ 0.69
COL16A1-207ENST00000466829 COL2A1P02458 1487 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-207ENST00000466829 A0A0G2JLL6 359 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-207ENST00000466829 MAGEB6P1A0A0J9YX57 407 aa19.35■□□□□ 0.69
COL16A1-207ENST00000466829 SMARCA5O60264 1052 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-207ENST00000466829 CAP2P40123 477 aa19.35■□□□□ 0.69
COL16A1-207ENST00000466829 NUCB1Q02818 461 aa19.35■□□□□ 0.69
COL16A1-207ENST00000466829 TMED8Q6PL24 325 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-207ENST00000466829 PRRT2Q7Z6L0 340 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-207ENST00000466829 FOXP4Q8IVH2 680 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-207ENST00000466829 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.35■□□□□ 0.69
COL16A1-207ENST00000466829 PTPN22Q9Y2R2 807 aa19.35■□□□□ 0.69
COL16A1-207ENST00000466829 DOCK2Q92608 1830 aa19.35■□□□□ 0.69
COL16A1-207ENST00000466829 MOGSQ13724 837 aa19.34■□□□□ 0.69
COL16A1-207ENST00000466829 PAG1Q9NWQ8 432 aa19.34■□□□□ 0.69
COL16A1-207ENST00000466829 USP17L5A8MUK1 530 aa19.33■□□□□ 0.68
COL16A1-207ENST00000466829 CYP2C8P10632 490 aa19.33■□□□□ 0.68
COL16A1-207ENST00000466829 PDE6AP16499 860 aa19.33■□□□□ 0.68
COL16A1-207ENST00000466829 RGS19P49795 217 aa19.33■□□□□ 0.68
COL16A1-207ENST00000466829 LACTBP83111 547 aaPredicted RBP19.33■□□□□ 0.68
COL16A1-207ENST00000466829 SPP2Q13103 211 aa19.33■□□□□ 0.68
COL16A1-207ENST00000466829 GPAT2Q6NUI2 795 aa19.33■□□□□ 0.68
COL16A1-207ENST00000466829 ZNF280CQ8ND82 737 aa19.33■□□□□ 0.68
COL16A1-207ENST00000466829 EDC3Q96F86 508 aaKnown RBP19.33■□□□□ 0.68
COL16A1-207ENST00000466829 AS3MTQ9HBK9 375 aa19.33■□□□□ 0.68
COL16A1-207ENST00000466829 ZNF532Q9HCE3 1301 aa19.32■□□□□ 0.68
COL16A1-207ENST00000466829 ATP5JP18859 108 aa19.32■□□□□ 0.68
COL16A1-207ENST00000466829 C17orf99Q6UX52 265 aa19.32■□□□□ 0.68
COL16A1-207ENST00000466829 CHD1LQ86WJ1 897 aa19.32■□□□□ 0.68
COL16A1-207ENST00000466829 SMCR8Q8TEV9 937 aaPredicted RBP19.32■□□□□ 0.68
COL16A1-207ENST00000466829 TBC1D2Q9BYX2 928 aa19.32■□□□□ 0.68
COL16A1-207ENST00000466829 CRNKL1Q9BZJ0 848 aaKnown RBP19.32■□□□□ 0.68
COL16A1-207ENST00000466829 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.32■□□□□ 0.68
COL16A1-207ENST00000466829 LAMB1P07942 1786 aa19.32■□□□□ 0.68
COL16A1-207ENST00000466829 MAST2Q6P0Q8 1798 aa19.32■□□□□ 0.68
COL16A1-207ENST00000466829 FMNL1O95466 1100 aaPredicted RBP19.31■□□□□ 0.68
COL16A1-207ENST00000466829 ASNSP08243 561 aa19.31■□□□□ 0.68
COL16A1-207ENST00000466829 RRP1BQ14684 758 aaKnown RBP19.31■□□□□ 0.68
COL16A1-207ENST00000466829 TTC6Q86TZ1 520 aa19.31■□□□□ 0.68
COL16A1-207ENST00000466829 GPATCH3Q96I76 525 aa19.31■□□□□ 0.68
COL16A1-207ENST00000466829 ARHGAP39Q9C0H5 1083 aa19.31■□□□□ 0.68
COL16A1-207ENST00000466829 GDF11O95390 407 aa19.3■□□□□ 0.68
COL16A1-207ENST00000466829 POLR3DP05423 398 aaPredicted RBP19.3■□□□□ 0.68
COL16A1-207ENST00000466829 PSMC4P43686 418 aa19.3■□□□□ 0.68
COL16A1-207ENST00000466829 CAP1Q01518 475 aa19.3■□□□□ 0.68
COL16A1-207ENST00000466829 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
COL16A1-207ENST00000466829 HAUS7Q99871 368 aa19.3■□□□□ 0.68
COL16A1-207ENST00000466829 AGTPBP1Q9UPW5 1226 aa19.3■□□□□ 0.68
COL16A1-207ENST00000466829 HOXD10P28358 340 aa19.29■□□□□ 0.68
COL16A1-207ENST00000466829 HMGCS2P54868 508 aa19.29■□□□□ 0.68
COL16A1-207ENST00000466829 SLC9C1Q4G0N8 1177 aa19.29■□□□□ 0.68
COL16A1-207ENST00000466829 NBPF11Q86T75 865 aa19.29■□□□□ 0.68
COL16A1-207ENST00000466829 RIOK1Q9BRS2 568 aaKnown RBP19.29■□□□□ 0.68
COL16A1-207ENST00000466829 TMOD4Q9NZQ9 345 aa19.29■□□□□ 0.68
COL16A1-207ENST00000466829 ZBTB47Q9UFB7 747 aaPredicted RBP19.29■□□□□ 0.68
COL16A1-207ENST00000466829 SERPINB13Q9UIV8 391 aa19.29■□□□□ 0.68
COL16A1-207ENST00000466829 PNMA3Q9UL41 463 aa19.29■□□□□ 0.68
COL16A1-207ENST00000466829 SLC45A1Q9Y2W3 748 aa19.29■□□□□ 0.68
COL16A1-207ENST00000466829 PTCH2Q9Y6C5 1203 aa19.29■□□□□ 0.68
COL16A1-207ENST00000466829 GNRH1P01148 92 aa19.28■□□□□ 0.68
COL16A1-207ENST00000466829 PABPC4Q13310 644 aaKnown RBP eCLIP19.28■□□□□ 0.68
COL16A1-207ENST00000466829 DNAJC18Q9H819 358 aa19.28■□□□□ 0.68
COL16A1-207ENST00000466829 ECHDC1Q9NTX5 307 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 259.6 ms