RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 TGFBRAP1Q8WUH2 860 aa11.22□□□□□ -0.61
SRPRB-202ENST00000466636 ESR2Q92731 530 aa11.22□□□□□ -0.61
SRPRB-202ENST00000466636 ROBO3Q96MS0 1386 aa11.22□□□□□ -0.61
SRPRB-202ENST00000466636 GBP4Q96PP9 640 aa11.22□□□□□ -0.61
SRPRB-202ENST00000466636 MRIQ9BWK5 157 aa11.22□□□□□ -0.61
SRPRB-202ENST00000466636 SENP2Q9HC62 589 aa11.22□□□□□ -0.61
SRPRB-202ENST00000466636 MCM9Q9NXL9 1143 aa11.22□□□□□ -0.61
SRPRB-202ENST00000466636 CD2APQ9Y5K6 639 aa11.22□□□□□ -0.61
SRPRB-202ENST00000466636 FLT1P17948 1338 aa11.21□□□□□ -0.61
SRPRB-202ENST00000466636 WDR33Q9C0J8 1336 aaKnown RBP11.21□□□□□ -0.61
SRPRB-202ENST00000466636 GOLGA8BA8MQT2 603 aa11.21□□□□□ -0.61
SRPRB-202ENST00000466636 F8W031 263 aaPredicted RBP11.21□□□□□ -0.61
SRPRB-202ENST00000466636 IFIT3O14879 490 aaKnown RBP11.21□□□□□ -0.61
SRPRB-202ENST00000466636 BAG4O95429 457 aaKnown RBP11.21□□□□□ -0.61
SRPRB-202ENST00000466636 SYT1P21579 422 aa11.21□□□□□ -0.61
SRPRB-202ENST00000466636 LIFRP42702 1097 aa11.21□□□□□ -0.61
SRPRB-202ENST00000466636 CCT2P78371 535 aaKnown RBP11.21□□□□□ -0.61
SRPRB-202ENST00000466636 RRP12Q5JTH9 1297 aaKnown RBP11.21□□□□□ -0.61
SRPRB-202ENST00000466636 MAPKAPK5Q8IW41 473 aa11.21□□□□□ -0.61
SRPRB-202ENST00000466636 STK11IPQ8N1F8 1099 aa11.21□□□□□ -0.61
SRPRB-202ENST00000466636 CHMP4CQ96CF2 233 aa11.21□□□□□ -0.61
SRPRB-202ENST00000466636 VPS33BQ9H267 617 aa11.21□□□□□ -0.61
SRPRB-202ENST00000466636 NCOA5Q9HCD5 579 aaKnown RBP11.21□□□□□ -0.61
SRPRB-202ENST00000466636 TOMM22Q9NS69 142 aa11.21□□□□□ -0.61
SRPRB-202ENST00000466636 MTMR6Q9Y217 621 aa11.21□□□□□ -0.61
SRPRB-202ENST00000466636 MYH13Q9UKX3 1938 aa11.21□□□□□ -0.62
SRPRB-202ENST00000466636 NID2Q14112 1375 aa11.2□□□□□ -0.62
SRPRB-202ENST00000466636 PTPDC1A2A3K4 754 aa11.2□□□□□ -0.62
SRPRB-202ENST00000466636 STX6O43752 255 aa11.2□□□□□ -0.62
SRPRB-202ENST00000466636 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
SRPRB-202ENST00000466636 SLC3A2P08195 630 aaKnown RBP11.2□□□□□ -0.62
SRPRB-202ENST00000466636 ZSCAN22P10073 491 aaPredicted RBP11.2□□□□□ -0.62
SRPRB-202ENST00000466636 NT5C2P49902 561 aa11.2□□□□□ -0.62
SRPRB-202ENST00000466636 SCNN1DP51172 638 aa11.2□□□□□ -0.62
SRPRB-202ENST00000466636 HDLBPQ00341 1268 aaKnown RBP11.2□□□□□ -0.62
SRPRB-202ENST00000466636 SEC23AQ15436 765 aa11.2□□□□□ -0.62
SRPRB-202ENST00000466636 DALRD3Q5D0E6 543 aaKnown RBP11.2□□□□□ -0.62
SRPRB-202ENST00000466636 APOBEC3HQ6NTF7 200 aaKnown RBP11.2□□□□□ -0.62
SRPRB-202ENST00000466636 APOA5Q6Q788 366 aa11.2□□□□□ -0.62
SRPRB-202ENST00000466636 TEKT1Q969V4 418 aa11.2□□□□□ -0.62
SRPRB-202ENST00000466636 ZNF277Q9NRM2 450 aaPredicted RBP11.2□□□□□ -0.62
SRPRB-202ENST00000466636 COL4A5P29400 1685 aa11.2□□□□□ -0.62
SRPRB-202ENST00000466636 DDX11L8A8MPP1 907 aa11.19□□□□□ -0.62
SRPRB-202ENST00000466636 PRDM1O75626 825 aa11.19□□□□□ -0.62
SRPRB-202ENST00000466636 WDHD1O75717 1129 aaPredicted RBP11.19□□□□□ -0.62
SRPRB-202ENST00000466636 PDIA4P13667 645 aaKnown RBP11.19□□□□□ -0.62
SRPRB-202ENST00000466636 PDCP20941 246 aa11.19□□□□□ -0.62
SRPRB-202ENST00000466636 CRKP46108 304 aa11.19□□□□□ -0.62
SRPRB-202ENST00000466636 SART3Q15020 963 aaKnown RBP11.19□□□□□ -0.62
SRPRB-202ENST00000466636 FOXD4L5Q5VV16 416 aaPredicted RBP11.19□□□□□ -0.62
SRPRB-202ENST00000466636 KIAA0825Q8IV33 1275 aa11.19□□□□□ -0.62
SRPRB-202ENST00000466636 LARGE2Q8N3Y3 721 aa11.19□□□□□ -0.62
SRPRB-202ENST00000466636 FOXD4L4Q8WXT5 416 aaPredicted RBP11.19□□□□□ -0.62
SRPRB-202ENST00000466636 ZDHHC15Q96MV8 337 aa11.19□□□□□ -0.62
SRPRB-202ENST00000466636 ZKSCAN3Q9BRR0 538 aa11.19□□□□□ -0.62
SRPRB-202ENST00000466636 SAP30BPQ9UHR5 308 aaKnown RBP11.19□□□□□ -0.62
SRPRB-202ENST00000466636 NAP1L2Q9ULW6 460 aaPredicted RBP11.19□□□□□ -0.62
SRPRB-202ENST00000466636 TNKSO95271 1327 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 IARSP41252 1262 aaKnown RBP11.18□□□□□ -0.62
SRPRB-202ENST00000466636 PLCD1P51178 756 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 RCAN1P53805 252 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 HMGN5P82970 282 aaKnown RBP11.18□□□□□ -0.62
SRPRB-202ENST00000466636 PDE4BQ07343 736 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 WTAPQ15007 396 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 LARP1BQ659C4 914 aaKnown RBP11.18□□□□□ -0.62
SRPRB-202ENST00000466636 CDC42EP5Q6NZY7 148 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 NFXL1Q6ZNB6 911 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 RAB11FIP4Q86YS3 637 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 AMOTL1Q8IY63 956 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 TMTC2Q8N394 836 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 DDX11Q96FC9 970 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 DYNLL2Q96FJ2 89 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 ZSCAN10Q96SZ4 725 aaPredicted RBP11.18□□□□□ -0.62
SRPRB-202ENST00000466636 UBAC1Q9BSL1 405 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 DDX4Q9NQI0 724 aaKnown RBP11.18□□□□□ -0.62
SRPRB-202ENST00000466636 FAM217BQ9NTX9 383 aaPredicted RBP11.18□□□□□ -0.62
SRPRB-202ENST00000466636 USP40Q9NVE5 1235 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 SERPINA10Q9UK55 444 aa11.18□□□□□ -0.62
SRPRB-202ENST00000466636 MYO3BQ8WXR4 1341 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 ERICH2A1L162 156 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 CCDC69A6NI79 296 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 GOLGA8AA7E2F4 631 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 NFKBIEO00221 500 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 STK25O00506 426 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 ZBTB43O43298 467 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 DHX16O60231 1041 aaKnown RBP11.17□□□□□ -0.62
SRPRB-202ENST00000466636 RANBP6O60518 1105 aaKnown RBP11.17□□□□□ -0.62
SRPRB-202ENST00000466636 F13A1P00488 732 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 POLR3DP05423 398 aaPredicted RBP11.17□□□□□ -0.62
SRPRB-202ENST00000466636 VIL1P09327 827 aaKnown RBP11.17□□□□□ -0.62
SRPRB-202ENST00000466636 FDPSP14324 419 aaKnown RBP11.17□□□□□ -0.62
SRPRB-202ENST00000466636 METAP2P50579 478 aaKnown RBP eCLIP11.17□□□□□ -0.62
SRPRB-202ENST00000466636 SLC4A8Q2Y0W8 1093 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 RSBN1LQ6PCB5 846 aaPredicted RBP11.17□□□□□ -0.62
SRPRB-202ENST00000466636 CDC37L1Q7L3B6 337 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 ENAHQ8N8S7 591 aaPredicted RBP11.17□□□□□ -0.62
SRPRB-202ENST00000466636 CHAMP1Q96JM3 812 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 GMLQ99445 158 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 TAOK3Q9H2K8 898 aa11.17□□□□□ -0.62
SRPRB-202ENST00000466636 PPP1R1BQ9UD71 204 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms