RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, human

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCCAG3-208	ENST00000466579	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	LCORL	Q8N3X6	602 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	APPBP2	Q92624	585 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	ELP3	Q9H9T3	547 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	SAGE1	Q9NXZ1	904 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	TAOK2	Q9UL54	1235 aa		11.44	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	MANSC4	A6NHS7	340 aa	Predicted RBP	11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	FOXN1	O15353	648 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	CTNND1	O60716	968 aa	Known RBP	11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	MBD4	O95243	580 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	INHBE	P58166	350 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PPAT	Q06203	517 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PPIL2	Q13356	520 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	EVI5L	Q96CN4	794 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	OPTN	Q96CV9	577 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	MS4A4A	Q96JQ5	239 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	CFHR5	Q9BXR6	569 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PUS7L	Q9H0K6	701 aa	Known RBP	11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	EHD4	Q9H223	541 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	DNAJC18	Q9H819	358 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	ATP8A2	Q9NTI2	1148 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	ATAD5	Q96QE3	1844 aa		11.43	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	SLURP2	P0DP57	97 aa		11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PDE4A	P27815	886 aa		11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	USP5	P45974	858 aa		11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	SREBF2	Q12772	1141 aa		11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	ZMYM1	Q5SVZ6	1142 aa		11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	SCYL3	Q8IZE3	742 aa		11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	OSBP2	Q969R2	916 aa		11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	STRBP	Q96SI9	672 aa	Known RBP	11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	ARMT1	Q9H993	441 aa		11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PALD1	Q9ULE6	856 aa		11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	KCNH4	Q9UQ05	1017 aa		11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.42	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PTPRF	P10586	1907 aa		11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	HLA-DOA	P06340	250 aa		11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	HSPA8	P11142	646 aa	Known RBP	11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	CTCF	P49711	727 aa	Predicted RBP	11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	GABPA	Q06546	454 aa		11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	RRP1B	Q14684	758 aa	Known RBP	11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	TATDN1	Q6P1N9	297 aa		11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	GIMAP6	Q6P9H5	292 aa		11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	TTC6	Q86TZ1	520 aa		11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	AIDA	Q96BJ3	306 aa		11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	GINM1	Q9NU53	330 aa		11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	RNF186	Q9NXI6	227 aa		11.41	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PRKAB2	O43741	272 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PTPRA	P18433	802 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	CAP2	P40123	477 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	GTF2A2	P52657	109 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	MKRN3	Q13064	507 aa	Known RBP	11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	NOM1	Q5C9Z4	860 aa	Known RBP	11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	IFNL1	Q8IU54	200 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	SDR42E1	Q8WUS8	393 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	OTUD5	Q96G74	571 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	FSD1	Q9BTV5	496 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	BEGAIN	Q9BUH8	593 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	TBC1D2	Q9BYX2	928 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	PRDM10	Q9NQV6	1147 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	SAP30BP	Q9UHR5	308 aa	Known RBP	11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	SERPINB13	Q9UIV8	391 aa		11.4	□□□□□ -0.58
SDCCAG3-208	ENST00000466579	FAM196B	A6NMK8	535 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	GSG1L2	A8MUP6	293 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579		M0R2C6	588 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	CXCL11	O14625	94 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	IRF6	O14896	467 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	GPAA1	O43292	621 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	ALDH1A1	P00352	501 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	GNAT2	P19087	354 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	PLCD1	P51178	756 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	MOGS	Q13724	837 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	SBK1	Q52WX2	424 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	BRI3BP	Q8WY22	251 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	PTPN18	Q99952	460 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	ZCCHC17	Q9NP64	241 aa	Known RBP	11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	MCM9	Q9NXL9	1143 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	AFG3L2	Q9Y4W6	797 aa		11.39	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	CENPB	P07199	599 aa	Predicted RBP	11.38	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	CETP	P11597	493 aa		11.38	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	SHMT1	P34896	483 aa		11.38	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	SNAPC2	Q13487	334 aa		11.38	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	C12orf60	Q5U649	245 aa		11.38	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.38	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	PICK1	Q9NRD5	415 aa		11.38	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	HELLS	Q9NRZ9	838 aa		11.38	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	SLC4A4	Q9Y6R1	1079 aa		11.38	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	MYH8	P13535	1937 aa		11.37	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	LOC285556	D6RIA3	1793 aa		11.37	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	CCL15-CCL14	A0A0B4J2E2	113 aa		11.37	□□□□□ -0.59
SDCCAG3-208	ENST00000466579		A0A0G2JLL6	359 aa	Predicted RBP	11.37	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	PATL2	C9JE40	543 aa	Known RBP	11.37	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	FOXP2	O15409	715 aa		11.37	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	TRPA1	O75762	1119 aa		11.37	□□□□□ -0.59
SDCCAG3-208	ENST00000466579	POLR3D	P05423	398 aa	Predicted RBP	11.37	□□□□□ -0.59

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