RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 MIGA1Q8NAN2 632 aa17.16■□□□□ 0.34
CACNA1C-224ENST00000465934 ADGRA2Q96PE1 1338 aa17.16■□□□□ 0.34
CACNA1C-224ENST00000465934 HMMRO75330 724 aa17.15■□□□□ 0.34
CACNA1C-224ENST00000465934 CYP2C8P10632 490 aa17.15■□□□□ 0.34
CACNA1C-224ENST00000465934 CTGFP29279 349 aa17.15■□□□□ 0.34
CACNA1C-224ENST00000465934 LACTBP83111 547 aaPredicted RBP17.15■□□□□ 0.34
CACNA1C-224ENST00000465934 SLC4A8Q2Y0W8 1093 aa17.15■□□□□ 0.34
CACNA1C-224ENST00000465934 MAGEB6Q8N7X4 407 aa17.15■□□□□ 0.34
CACNA1C-224ENST00000465934 KIF1BPQ96EK5 621 aa17.15■□□□□ 0.34
CACNA1C-224ENST00000465934 SAP30BPQ9UHR5 308 aaKnown RBP17.15■□□□□ 0.34
CACNA1C-224ENST00000465934 MKI67P46013 3256 aaKnown RBP17.15■□□□□ 0.34
CACNA1C-224ENST00000465934 PLCG2P16885 1265 aa17.14■□□□□ 0.33
CACNA1C-224ENST00000465934 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
CACNA1C-224ENST00000465934 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
CACNA1C-224ENST00000465934 GADL1Q6ZQY3 521 aa17.14■□□□□ 0.33
CACNA1C-224ENST00000465934 CLASRPQ8N2M8 674 aaKnown RBP17.14■□□□□ 0.33
CACNA1C-224ENST00000465934 DNAJC18Q9H819 358 aa17.14■□□□□ 0.33
CACNA1C-224ENST00000465934 PALD1Q9ULE6 856 aa17.14■□□□□ 0.33
CACNA1C-224ENST00000465934 PTCH2Q9Y6C5 1203 aa17.14■□□□□ 0.33
CACNA1C-224ENST00000465934 JAG1P78504 1218 aa17.13■□□□□ 0.33
CACNA1C-224ENST00000465934 PI4KBQ9UBF8 816 aa17.13■□□□□ 0.33
CACNA1C-224ENST00000465934 ZSWIM8A7E2V4 1837 aa17.12■□□□□ 0.33
CACNA1C-224ENST00000465934 POTEFA5A3E0 1075 aa17.12■□□□□ 0.33
CACNA1C-224ENST00000465934 IFIT2P09913 472 aaKnown RBP17.12■□□□□ 0.33
CACNA1C-224ENST00000465934 CAP2P40123 477 aa17.12■□□□□ 0.33
CACNA1C-224ENST00000465934 FASTKD5Q7L8L6 764 aaKnown RBP17.12■□□□□ 0.33
CACNA1C-224ENST00000465934 ARMC5Q96C12 935 aa17.12■□□□□ 0.33
CACNA1C-224ENST00000465934 EDC3Q96F86 508 aaKnown RBP17.12■□□□□ 0.33
CACNA1C-224ENST00000465934 TRIM47Q96LD4 638 aa17.12■□□□□ 0.33
CACNA1C-224ENST00000465934 PARK7Q99497 189 aaKnown RBP17.12■□□□□ 0.33
CACNA1C-224ENST00000465934 DHX36Q9H2U1 1008 aaKnown RBP17.12■□□□□ 0.33
CACNA1C-224ENST00000465934 HERC5Q9UII4 1024 aaKnown RBP17.12■□□□□ 0.33
CACNA1C-224ENST00000465934 RAB11FIP3O75154 756 aa17.11■□□□□ 0.33
CACNA1C-224ENST00000465934 MAP3K12Q12852 859 aa17.11■□□□□ 0.33
CACNA1C-224ENST00000465934 SPP2Q13103 211 aa17.11■□□□□ 0.33
CACNA1C-224ENST00000465934 TREML2Q5T2D2 321 aa17.11■□□□□ 0.33
CACNA1C-224ENST00000465934 DNAJC2Q99543 621 aaKnown RBP17.11■□□□□ 0.33
CACNA1C-224ENST00000465934 DOCK1Q14185 1865 aa17.11■□□□□ 0.33
CACNA1C-224ENST00000465934 MYO5AQ9Y4I1 1855 aaKnown RBP17.1■□□□□ 0.33
CACNA1C-224ENST00000465934 GOLIM4O00461 696 aa17.1■□□□□ 0.33
CACNA1C-224ENST00000465934 IGSF3O75054 1194 aa17.1■□□□□ 0.33
CACNA1C-224ENST00000465934 BCRP11274 1271 aa17.1■□□□□ 0.33
CACNA1C-224ENST00000465934 PSMC4P43686 418 aa17.1■□□□□ 0.33
CACNA1C-224ENST00000465934 KIF22Q14807 665 aa17.1■□□□□ 0.33
CACNA1C-224ENST00000465934 ARHGEF6Q15052 776 aa17.1■□□□□ 0.33
CACNA1C-224ENST00000465934 METTL16Q86W50 562 aaKnown RBP17.1■□□□□ 0.33
CACNA1C-224ENST00000465934 ZNF280CQ8ND82 737 aa17.1■□□□□ 0.33
CACNA1C-224ENST00000465934 CHMP4BQ9H444 224 aaKnown RBP17.1■□□□□ 0.33
CACNA1C-224ENST00000465934 SIPA1L1O43166 1804 aa17.1■□□□□ 0.33
CACNA1C-224ENST00000465934 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
CACNA1C-224ENST00000465934 GDF11O95390 407 aa17.09■□□□□ 0.33
CACNA1C-224ENST00000465934 PDE6AP16499 860 aa17.09■□□□□ 0.33
CACNA1C-224ENST00000465934 USP5P45974 858 aa17.09■□□□□ 0.33
CACNA1C-224ENST00000465934 SLFNL1Q499Z3 407 aa17.09■□□□□ 0.33
CACNA1C-224ENST00000465934 SLC9C1Q4G0N8 1177 aa17.09■□□□□ 0.33
CACNA1C-224ENST00000465934 CRACR2BQ8N4Y2 399 aaPredicted RBP17.09■□□□□ 0.33
CACNA1C-224ENST00000465934 SH3TC2Q8TF17 1288 aa17.09■□□□□ 0.33
CACNA1C-224ENST00000465934 ZNF333Q96JL9 665 aa17.09■□□□□ 0.33
CACNA1C-224ENST00000465934 RIOK1Q9BRS2 568 aaKnown RBP17.09■□□□□ 0.33
CACNA1C-224ENST00000465934 AGTPBP1Q9UPW5 1226 aa17.09■□□□□ 0.33
CACNA1C-224ENST00000465934 USP17L5A8MUK1 530 aa17.08■□□□□ 0.32
CACNA1C-224ENST00000465934 MYCP01106 439 aaPredicted RBP17.08■□□□□ 0.32
CACNA1C-224ENST00000465934 OSBPP22059 807 aa17.08■□□□□ 0.32
CACNA1C-224ENST00000465934 HMGCS2P54868 508 aa17.08■□□□□ 0.32
CACNA1C-224ENST00000465934 SLC9C2Q5TAH2 1124 aa17.08■□□□□ 0.32
CACNA1C-224ENST00000465934 FOXP4Q8IVH2 680 aaPredicted RBP17.08■□□□□ 0.32
CACNA1C-224ENST00000465934 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.08■□□□□ 0.32
CACNA1C-224ENST00000465934 BOLA2Q9H3K6 86 aa17.08■□□□□ 0.32
CACNA1C-224ENST00000465934 SLC45A1Q9Y2W3 748 aa17.08■□□□□ 0.32
CACNA1C-224ENST00000465934 PHIPQ8WWQ0 1821 aa17.07■□□□□ 0.32
CACNA1C-224ENST00000465934 ZNF532Q9HCE3 1301 aa17.07■□□□□ 0.32
CACNA1C-224ENST00000465934 TCRBV5S4A2TA0A5A2 114 aa17.07■□□□□ 0.32
CACNA1C-224ENST00000465934 FMNL1O95466 1100 aaPredicted RBP17.07■□□□□ 0.32
CACNA1C-224ENST00000465934 CHGBP05060 677 aa17.07■□□□□ 0.32
CACNA1C-224ENST00000465934 TTF1Q15361 905 aaPredicted RBP17.07■□□□□ 0.32
CACNA1C-224ENST00000465934 TRIM34Q9BYJ4 488 aa17.07■□□□□ 0.32
CACNA1C-224ENST00000465934 MAGEB6P1A0A0J9YX57 407 aa17.06■□□□□ 0.32
CACNA1C-224ENST00000465934 HLA-DOAP06340 250 aa17.06■□□□□ 0.32
CACNA1C-224ENST00000465934 EVX2Q03828 476 aa17.06■□□□□ 0.32
CACNA1C-224ENST00000465934 MTMR2Q13614 643 aa17.06■□□□□ 0.32
CACNA1C-224ENST00000465934 SMCR8Q8TEV9 937 aaPredicted RBP17.06■□□□□ 0.32
CACNA1C-224ENST00000465934 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
CACNA1C-224ENST00000465934 SRRDQ9UH36 339 aa17.06■□□□□ 0.32
CACNA1C-224ENST00000465934 ZBTB21Q9ULJ3 1066 aa17.06■□□□□ 0.32
CACNA1C-224ENST00000465934 GNRH1P01148 92 aa17.05■□□□□ 0.32
CACNA1C-224ENST00000465934 ASNSP08243 561 aa17.05■□□□□ 0.32
CACNA1C-224ENST00000465934 ATP5JP18859 108 aa17.05■□□□□ 0.32
CACNA1C-224ENST00000465934 EN2P19622 333 aaPredicted RBP17.05■□□□□ 0.32
CACNA1C-224ENST00000465934 PRKCZQ05513 592 aa17.05■□□□□ 0.32
CACNA1C-224ENST00000465934 CERS3Q8IU89 383 aa17.05■□□□□ 0.32
CACNA1C-224ENST00000465934 PROCA1Q8NCQ7 364 aaPredicted RBP17.05■□□□□ 0.32
CACNA1C-224ENST00000465934 WDR18Q9BV38 432 aa17.05■□□□□ 0.32
CACNA1C-224ENST00000465934 PAG1Q9NWQ8 432 aa17.05■□□□□ 0.32
CACNA1C-224ENST00000465934 MYPNQ86TC9 1320 aa17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 CDK5RAP2Q96SN8 1893 aa17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 PLCD1P51178 756 aa17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 FCGRTP55899 365 aa17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 SH3D19Q5HYK7 790 aa17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 TMED8Q6PL24 325 aaPredicted RBP17.04■□□□□ 0.32
CACNA1C-224ENST00000465934 LCORLQ8N3X6 602 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms