RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 KRTAP4-12Q9BQ66 201 aa10.04□□□□□ -0.8
SSB-207ENST00000465871 SPRED2Q7Z698 418 aa10.03□□□□□ -0.8
SSB-207ENST00000465871 PLPPR2Q96GM1 343 aa10.03□□□□□ -0.8
SSB-207ENST00000465871 PRAMEF27A3QJZ7 478 aa10.02□□□□□ -0.81
SSB-207ENST00000465871 PRKCQQ04759 706 aa10.02□□□□□ -0.81
SSB-207ENST00000465871 PLCL1Q15111 1095 aa10.02□□□□□ -0.81
SSB-207ENST00000465871 DNAJC14Q6Y2X3 702 aaPredicted RBP10.02□□□□□ -0.81
SSB-207ENST00000465871 ARMCX6Q7L4S7 300 aa10.02□□□□□ -0.81
SSB-207ENST00000465871 CYFIP1Q7L576 1253 aa10.02□□□□□ -0.81
SSB-207ENST00000465871 HDXQ7Z353 690 aa10.02□□□□□ -0.81
SSB-207ENST00000465871 HEXIM2Q96MH2 286 aaKnown RBP10.02□□□□□ -0.81
SSB-207ENST00000465871 GTF2IRD1Q9UHL9 959 aa10.02□□□□□ -0.81
SSB-207ENST00000465871 VAV3Q9UKW4 847 aa10.02□□□□□ -0.81
SSB-207ENST00000465871 RNF114Q9Y508 228 aa10.02□□□□□ -0.81
SSB-207ENST00000465871 BNIP3Q12983 259 aa10.01□□□□□ -0.81
SSB-207ENST00000465871 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.01□□□□□ -0.81
SSB-207ENST00000465871 FAM214BQ7L5A3 538 aa10.01□□□□□ -0.81
SSB-207ENST00000465871 ZNF507Q8TCN5 953 aa10.01□□□□□ -0.81
SSB-207ENST00000465871 HRASLS5Q96KN8 279 aa10.01□□□□□ -0.81
SSB-207ENST00000465871 PLAGL2Q9UPG8 496 aa10.01□□□□□ -0.81
SSB-207ENST00000465871 SNCAIPQ9Y6H5 919 aa10.01□□□□□ -0.81
SSB-207ENST00000465871 TMEM265A0A087WTH1 108 aa10□□□□□ -0.81
SSB-207ENST00000465871 IGF2BP3O00425 579 aaKnown RBP eCLIP10□□□□□ -0.81
SSB-207ENST00000465871 LRIG2O94898 1065 aa10□□□□□ -0.81
SSB-207ENST00000465871 ITIH2P19823 946 aa10□□□□□ -0.81
SSB-207ENST00000465871 TXKP42681 527 aa10□□□□□ -0.81
SSB-207ENST00000465871 WIPI1Q5MNZ9 446 aaPredicted RBP10□□□□□ -0.81
SSB-207ENST00000465871 TNKS2Q9H2K2 1166 aa10□□□□□ -0.81
SSB-207ENST00000465871 PARP2Q9UGN5 583 aa10□□□□□ -0.81
SSB-207ENST00000465871 CD8BP10966 210 aa9.99□□□□□ -0.81
SSB-207ENST00000465871 ITGB5P18084 799 aa9.99□□□□□ -0.81
SSB-207ENST00000465871 LMNB1P20700 586 aa9.99□□□□□ -0.81
SSB-207ENST00000465871 WNT10AQ9GZT5 417 aa9.99□□□□□ -0.81
SSB-207ENST00000465871 FUT4P22083 530 aa9.98□□□□□ -0.81
SSB-207ENST00000465871 LIG3P49916 1009 aa9.98□□□□□ -0.81
SSB-207ENST00000465871 DAB2P98082 770 aa9.98□□□□□ -0.81
SSB-207ENST00000465871 PSMD2Q13200 908 aa9.98□□□□□ -0.81
SSB-207ENST00000465871 SEPT6Q14141 434 aa9.98□□□□□ -0.81
SSB-207ENST00000465871 AOC3Q16853 763 aa9.98□□□□□ -0.81
SSB-207ENST00000465871 MEI1Q5TIA1 1274 aa9.98□□□□□ -0.81
SSB-207ENST00000465871 AGMOQ6ZNB7 445 aa9.98□□□□□ -0.81
SSB-207ENST00000465871 FBRSQ9HAH7 460 aa9.98□□□□□ -0.81
SSB-207ENST00000465871 EOMESO95936 686 aa9.97□□□□□ -0.81
SSB-207ENST00000465871 JUNBP17275 347 aaPredicted RBP9.97□□□□□ -0.81
SSB-207ENST00000465871 CAP2P40123 477 aa9.97□□□□□ -0.81
SSB-207ENST00000465871 CDK8P49336 464 aa9.97□□□□□ -0.81
SSB-207ENST00000465871 ETF1P62495 437 aaKnown RBP9.97□□□□□ -0.81
SSB-207ENST00000465871 ZNF792Q3KQV3 632 aa9.97□□□□□ -0.81
SSB-207ENST00000465871 PCDHB5Q9Y5E4 795 aa9.97□□□□□ -0.81
SSB-207ENST00000465871 SNX11Q9Y5W9 270 aa9.97□□□□□ -0.81
SSB-207ENST00000465871 CD96P40200 585 aa9.96□□□□□ -0.82
SSB-207ENST00000465871 ST13P50502 369 aaKnown RBP9.96□□□□□ -0.82
SSB-207ENST00000465871 SLBPQ14493 270 aaKnown RBP eCLIP9.96□□□□□ -0.82
SSB-207ENST00000465871 MAP3K11Q16584 847 aa9.96□□□□□ -0.82
SSB-207ENST00000465871 FOXQ1Q9C009 403 aa9.96□□□□□ -0.82
SSB-207ENST00000465871 GOLGA2P5Q9HBQ8 144 aa9.96□□□□□ -0.82
SSB-207ENST00000465871 PRDM5Q9NQX1 630 aaPredicted RBP9.96□□□□□ -0.82
SSB-207ENST00000465871 MAPK8IP1Q9UQF2 711 aa9.96□□□□□ -0.82
SSB-207ENST00000465871 GNAT3A8MTJ3 354 aa9.95□□□□□ -0.82
SSB-207ENST00000465871 TMC4Q7Z404 712 aa9.95□□□□□ -0.82
SSB-207ENST00000465871 FBXO33Q7Z6M2 555 aa9.95□□□□□ -0.82
SSB-207ENST00000465871 SPACA3Q8IXA5 215 aa9.95□□□□□ -0.82
SSB-207ENST00000465871 MIR1-1HGQ9H1L0 117 aa9.95□□□□□ -0.82
SSB-207ENST00000465871 SLITRK5O94991 958 aa9.94□□□□□ -0.82
SSB-207ENST00000465871 RLBP1P12271 317 aa9.94□□□□□ -0.82
SSB-207ENST00000465871 XPCQ01831 940 aaPredicted RBP9.94□□□□□ -0.82
SSB-207ENST00000465871 TAF1CQ15572 869 aaPredicted RBP9.94□□□□□ -0.82
SSB-207ENST00000465871 NKG7Q16617 165 aa9.94□□□□□ -0.82
SSB-207ENST00000465871 ANGEL2Q5VTE6 544 aaKnown RBP9.94□□□□□ -0.82
SSB-207ENST00000465871 KRTAP19-1Q8IUB9 90 aa9.94□□□□□ -0.82
SSB-207ENST00000465871 HID1Q8IV36 788 aa9.94□□□□□ -0.82
SSB-207ENST00000465871 MFSD2AQ8NA29 543 aa9.94□□□□□ -0.82
SSB-207ENST00000465871 ASIC4Q96FT7 647 aa9.94□□□□□ -0.82
SSB-207ENST00000465871 NOC4LQ9BVI4 516 aaKnown RBP9.94□□□□□ -0.82
SSB-207ENST00000465871 TACC3Q9Y6A5 838 aa9.94□□□□□ -0.82
SSB-207ENST00000465871 GRK4P32298 578 aa9.93□□□□□ -0.82
SSB-207ENST00000465871 CLCN7P51798 805 aa9.93□□□□□ -0.82
SSB-207ENST00000465871 NKPD1Q17RQ9 610 aa9.93□□□□□ -0.82
SSB-207ENST00000465871 MIPEPQ99797 713 aa9.93□□□□□ -0.82
SSB-207ENST00000465871 GFRA2O00451 464 aa9.92□□□□□ -0.82
SSB-207ENST00000465871 PAPLNO95428 1278 aa9.92□□□□□ -0.82
SSB-207ENST00000465871 CTSHP09668 335 aa9.92□□□□□ -0.82
SSB-207ENST00000465871 TFE3P19532 575 aaPredicted RBP9.92□□□□□ -0.82
SSB-207ENST00000465871 ASB11Q8WXH4 323 aa9.92□□□□□ -0.82
SSB-207ENST00000465871 FAM161BQ96MY7 647 aa9.92□□□□□ -0.82
SSB-207ENST00000465871 ADAMTS6Q9UKP5 1117 aa9.92□□□□□ -0.82
SSB-207ENST00000465871 RNASE1P07998 156 aaKnown RBP9.91□□□□□ -0.82
SSB-207ENST00000465871 C22orf34Q6ZV56 151 aa9.91□□□□□ -0.82
SSB-207ENST00000465871 CRELD1Q96HD1 420 aa9.91□□□□□ -0.82
SSB-207ENST00000465871 RC3H2Q9HBD1 1191 aaKnown RBP9.91□□□□□ -0.82
SSB-207ENST00000465871 MBNL3Q9NUK0 354 aaKnown RBP9.91□□□□□ -0.82
SSB-207ENST00000465871 TPX2Q9ULW0 747 aaKnown RBP9.91□□□□□ -0.82
SSB-207ENST00000465871 BIN1O00499 593 aa9.9□□□□□ -0.82
SSB-207ENST00000465871 ERCC3P19447 782 aa9.9□□□□□ -0.82
SSB-207ENST00000465871 CCDC27Q2M243 656 aa9.9□□□□□ -0.82
SSB-207ENST00000465871 TSNAXIP1Q2TAA8 658 aa9.9□□□□□ -0.82
SSB-207ENST00000465871 LCE3BQ5TA77 95 aa9.9□□□□□ -0.82
SSB-207ENST00000465871 PRAMEF13Q5VWM6 474 aa9.9□□□□□ -0.82
SSB-207ENST00000465871 PI4K2BQ8TCG2 481 aa9.9□□□□□ -0.82
SSB-207ENST00000465871 USP31Q70CQ4 1352 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms