RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 NAA30Q147X3 362 aaPredicted RBP9.41□□□□□ -0.9
VPS8-218ENST00000465818 CRY2Q49AN0 593 aa9.41□□□□□ -0.9
VPS8-218ENST00000465818 GLYCTKQ8IVS8 523 aa9.41□□□□□ -0.9
VPS8-218ENST00000465818 RPAP2Q8IXW5 612 aaPredicted RBP9.41□□□□□ -0.9
VPS8-218ENST00000465818 SSH3Q8TE77 659 aa9.41□□□□□ -0.9
VPS8-218ENST00000465818 CCDC136Q96JN2 1154 aa9.41□□□□□ -0.9
VPS8-218ENST00000465818 NLRP3Q96P20 1036 aa9.41□□□□□ -0.9
VPS8-218ENST00000465818 PA2G4Q9UQ80 394 aaKnown RBP9.41□□□□□ -0.9
VPS8-218ENST00000465818 MAP4K5Q9Y4K4 846 aa9.41□□□□□ -0.9
VPS8-218ENST00000465818 ITGA6P23229 1130 aa9.4□□□□□ -0.9
VPS8-218ENST00000465818 RFX5P48382 616 aaPredicted RBP9.4□□□□□ -0.9
VPS8-218ENST00000465818 IFIT5Q13325 482 aaKnown RBP9.4□□□□□ -0.9
VPS8-218ENST00000465818 HDAC1Q13547 482 aaPredicted RBP9.4□□□□□ -0.9
VPS8-218ENST00000465818 SF3B3Q15393 1217 aaKnown RBP9.4□□□□□ -0.9
VPS8-218ENST00000465818 CCDC57Q2TAC2 916 aa9.4□□□□□ -0.9
VPS8-218ENST00000465818 TNS4Q8IZW8 715 aa9.4□□□□□ -0.9
VPS8-218ENST00000465818 KLHDC4Q8TBB5 520 aa9.4□□□□□ -0.9
VPS8-218ENST00000465818 RPGRQ92834 1020 aaKnown RBP9.4□□□□□ -0.9
VPS8-218ENST00000465818 BRIP1Q9BX63 1249 aa9.4□□□□□ -0.9
VPS8-218ENST00000465818 SPON1Q9HCB6 807 aa9.4□□□□□ -0.9
VPS8-218ENST00000465818 SEC31BQ9NQW1 1179 aa9.4□□□□□ -0.9
VPS8-218ENST00000465818 KDM2BQ8NHM5 1336 aa9.39□□□□□ -0.91
VPS8-218ENST00000465818 ANKRD18BA2A2Z9 1011 aa9.39□□□□□ -0.91
VPS8-218ENST00000465818 IGHDP01880 384 aa9.39□□□□□ -0.91
VPS8-218ENST00000465818 GRM5P41594 1212 aa9.39□□□□□ -0.91
VPS8-218ENST00000465818 FKBP4Q02790 459 aaKnown RBP eCLIP9.39□□□□□ -0.91
VPS8-218ENST00000465818 TAF7LQ5H9L4 462 aa9.39□□□□□ -0.91
VPS8-218ENST00000465818 VASH1Q7L8A9 365 aaPredicted RBP9.39□□□□□ -0.91
VPS8-218ENST00000465818 SIL1Q9H173 461 aa9.39□□□□□ -0.91
VPS8-218ENST00000465818 EXOC6BQ9Y2D4 811 aa9.39□□□□□ -0.91
VPS8-218ENST00000465818 DUOX1Q9NRD9 1551 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 KLRG2A4D1S0 409 aaPredicted RBP9.38□□□□□ -0.91
VPS8-218ENST00000465818 MYCP01106 439 aaPredicted RBP9.38□□□□□ -0.91
VPS8-218ENST00000465818 SRGNP10124 158 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 IGFBP4P22692 258 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 VARSP26640 1264 aaKnown RBP9.38□□□□□ -0.91
VPS8-218ENST00000465818 CHRNA5P30532 468 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 PDE6BP35913 854 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 PTPN12Q05209 780 aaKnown RBP9.38□□□□□ -0.91
VPS8-218ENST00000465818 DDX46Q7L014 1031 aaKnown RBP9.38□□□□□ -0.91
VPS8-218ENST00000465818 SLC51AQ86UW1 340 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 C2CD5Q86YS7 1000 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 CELF1Q92879 486 aaKnown RBP9.38□□□□□ -0.91
VPS8-218ENST00000465818 ASB16Q96NS5 453 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 CDC5LQ99459 802 aaKnown RBP9.38□□□□□ -0.91
VPS8-218ENST00000465818 SAP130Q9H0E3 1048 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 RWDD1Q9H446 243 aaPredicted RBP9.38□□□□□ -0.91
VPS8-218ENST00000465818 ETNK1Q9HBU6 452 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 PPP1R1BQ9UD71 204 aaPredicted RBP9.38□□□□□ -0.91
VPS8-218ENST00000465818 AK9Q5TCS8 1911 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 ZNF609O15014 1411 aa9.38□□□□□ -0.91
VPS8-218ENST00000465818 FER1L6Q2WGJ9 1857 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 LILRA1O75019 489 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 SURF6O75683 361 aaKnown RBP9.37□□□□□ -0.91
VPS8-218ENST00000465818 NPR1P16066 1061 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 NPR3P17342 541 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 MAPK1P28482 360 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 GDF10P55107 478 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 OS9Q13438 667 aaPredicted RBP9.37□□□□□ -0.91
VPS8-218ENST00000465818 GRAPQ13588 217 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 CC2D2BQ6DHV5 1058 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 CENPQQ7L2Z9 268 aaPredicted RBP9.37□□□□□ -0.91
VPS8-218ENST00000465818 ANKRD18AQ8IVF6 992 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 GRAPLQ8TC17 118 aaPredicted RBP9.37□□□□□ -0.91
VPS8-218ENST00000465818 COL26A1Q96A83 441 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 EMID1Q96A84 441 aaPredicted RBP9.37□□□□□ -0.91
VPS8-218ENST00000465818 CDK15Q96Q40 435 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 TSPAN10Q9H1Z9 355 aaPredicted RBP9.37□□□□□ -0.91
VPS8-218ENST00000465818 COPRSQ9NQ92 184 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 CYLDQ9NQC7 956 aa9.37□□□□□ -0.91
VPS8-218ENST00000465818 A0A1W2PRU2 124 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 H0YIN7 160 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 EYA2O00167 538 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 HOXA10P31260 410 aaPredicted RBP9.36□□□□□ -0.91
VPS8-218ENST00000465818 IGHMBP2P38935 993 aaKnown RBP9.36□□□□□ -0.91
VPS8-218ENST00000465818 WNT7BP56706 349 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 LRRC24Q50LG9 513 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 POTEGQ6S5H5 508 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 SMC5Q8IY18 1101 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 ZNF784Q8NCA9 323 aaPredicted RBP9.36□□□□□ -0.91
VPS8-218ENST00000465818 HELQQ8TDG4 1101 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 SCG3Q8WXD2 468 aaKnown RBP9.36□□□□□ -0.91
VPS8-218ENST00000465818 ZNF622Q969S3 477 aaKnown RBP eCLIP9.36□□□□□ -0.917e-6■■□□□ 12.8
VPS8-218ENST00000465818 MASTLQ96GX5 879 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 RBM17Q96I25 401 aaKnown RBP9.36□□□□□ -0.91
VPS8-218ENST00000465818 PUS3Q9BZE2 481 aaKnown RBP9.36□□□□□ -0.91
VPS8-218ENST00000465818 DCTPP1Q9H773 170 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 CNNM1Q9NRU3 951 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 DCTN4Q9UJW0 460 aa9.36□□□□□ -0.91
VPS8-218ENST00000465818 NOP58Q9Y2X3 529 aaKnown RBP9.36□□□□□ -0.91
VPS8-218ENST00000465818 CIAO1O76071 339 aa9.35□□□□□ -0.91
VPS8-218ENST00000465818 INHAP05111 366 aa9.35□□□□□ -0.91
VPS8-218ENST00000465818 DPEP1P16444 411 aa9.35□□□□□ -0.91
VPS8-218ENST00000465818 CCDC88AQ3V6T2 1871 aa9.35□□□□□ -0.91
VPS8-218ENST00000465818 STYK1Q6J9G0 422 aa9.35□□□□□ -0.91
VPS8-218ENST00000465818 PRPF40BQ6NWY9 871 aaKnown RBP9.35□□□□□ -0.91
VPS8-218ENST00000465818 LDHAL6AQ6ZMR3 332 aa9.35□□□□□ -0.91
VPS8-218ENST00000465818 ATG9AQ7Z3C6 839 aa9.35□□□□□ -0.91
VPS8-218ENST00000465818 ANKLE1Q8NAG6 615 aa9.35□□□□□ -0.91
VPS8-218ENST00000465818 NLGN2Q8NFZ4 835 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms