RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 TBC1D12O60347 775 aa20.94■□□□□ 0.94
TOM1-213ENST00000465529 CTNND1O60716 968 aaKnown RBP20.94■□□□□ 0.94
TOM1-213ENST00000465529 MLLT1Q03111 559 aaPredicted RBP20.94■□□□□ 0.94
TOM1-213ENST00000465529 ANKRD23Q86SG2 305 aa20.94■□□□□ 0.94
TOM1-213ENST00000465529 CLASRPQ8N2M8 674 aaKnown RBP20.94■□□□□ 0.94
TOM1-213ENST00000465529 CPA4Q9UI42 421 aa20.94■□□□□ 0.94
TOM1-213ENST00000465529 AFG3L2Q9Y4W6 797 aa20.94■□□□□ 0.94
TOM1-213ENST00000465529 EDC3Q96F86 508 aaKnown RBP20.93■□□□□ 0.94
TOM1-213ENST00000465529 DNAJC18Q9H819 358 aa20.93■□□□□ 0.94
TOM1-213ENST00000465529 ZCCHC17Q9NP64 241 aaKnown RBP20.93■□□□□ 0.94
TOM1-213ENST00000465529 SAP30BPQ9UHR5 308 aaKnown RBP20.93■□□□□ 0.94
TOM1-213ENST00000465529 PTPN22Q9Y2R2 807 aa20.93■□□□□ 0.94
TOM1-213ENST00000465529 A0A0G2JLL6 359 aaPredicted RBP20.92■□□□□ 0.94
TOM1-213ENST00000465529 TRIM75PA6NK02 468 aa20.92■□□□□ 0.94
TOM1-213ENST00000465529 CXCL11O14625 94 aa20.92■□□□□ 0.94
TOM1-213ENST00000465529 PLCG2P16885 1265 aa20.92■□□□□ 0.94
TOM1-213ENST00000465529 SHROOM1Q2M3G4 852 aaPredicted RBP20.92■□□□□ 0.94
TOM1-213ENST00000465529 GADL1Q6ZQY3 521 aa20.92■□□□□ 0.94
TOM1-213ENST00000465529 PRRT2Q7Z6L0 340 aaPredicted RBP20.92■□□□□ 0.94
TOM1-213ENST00000465529 DNAJC2Q99543 621 aaKnown RBP20.92■□□□□ 0.94
TOM1-213ENST00000465529 PALD1Q9ULE6 856 aa20.92■□□□□ 0.94
TOM1-213ENST00000465529 ADGRA2Q96PE1 1338 aa20.92■□□□□ 0.94
TOM1-213ENST00000465529 CENPFP49454 3210 aa20.91■□□□□ 0.94
TOM1-213ENST00000465529 SMARCA5O60264 1052 aaPredicted RBP20.91■□□□□ 0.94
TOM1-213ENST00000465529 IFIT2P09913 472 aaKnown RBP20.91■□□□□ 0.94
TOM1-213ENST00000465529 CYP2C8P10632 490 aa20.91■□□□□ 0.94
TOM1-213ENST00000465529 CTGFP29279 349 aa20.91■□□□□ 0.94
TOM1-213ENST00000465529 C17orf99Q6UX52 265 aa20.91■□□□□ 0.94
TOM1-213ENST00000465529 RAB11FIP3O75154 756 aa20.9■□□□□ 0.94
TOM1-213ENST00000465529 JAG1P78504 1218 aa20.9■□□□□ 0.94
TOM1-213ENST00000465529 CHMP4BQ9H444 224 aaKnown RBP20.9■□□□□ 0.94
TOM1-213ENST00000465529 TNRC18O15417 2968 aaPredicted RBP20.89■□□□□ 0.94
TOM1-213ENST00000465529 GOLIM4O00461 696 aa20.89■□□□□ 0.93
TOM1-213ENST00000465529 CAP2P40123 477 aa20.89■□□□□ 0.93
TOM1-213ENST00000465529 LACTBP83111 547 aaPredicted RBP20.89■□□□□ 0.93
TOM1-213ENST00000465529 MAP3K12Q12852 859 aa20.89■□□□□ 0.93
TOM1-213ENST00000465529 YTHDC1Q96MU7 727 aaKnown RBP20.89■□□□□ 0.93
TOM1-213ENST00000465529 PI4KBQ9UBF8 816 aa20.89■□□□□ 0.93
TOM1-213ENST00000465529 PTCH2Q9Y6C5 1203 aa20.89■□□□□ 0.93
TOM1-213ENST00000465529 NAV1Q8NEY1 1877 aa20.89■□□□□ 0.93
TOM1-213ENST00000465529 LOC285556D6RIA3 1793 aa20.89■□□□□ 0.93
TOM1-213ENST00000465529 DDX60LQ5H9U9 1706 aaKnown RBP20.89■□□□□ 0.93
TOM1-213ENST00000465529 SLFNL1Q499Z3 407 aa20.88■□□□□ 0.93
TOM1-213ENST00000465529 DHX36Q9H2U1 1008 aaKnown RBP20.88■□□□□ 0.93
TOM1-213ENST00000465529 BOLA2Q9H3K6 86 aa20.88■□□□□ 0.93
TOM1-213ENST00000465529 HERC5Q9UII4 1024 aaKnown RBP20.88■□□□□ 0.93
TOM1-213ENST00000465529 MGAMO43451 1857 aa20.88■□□□□ 0.93
TOM1-213ENST00000465529 GDF11O95390 407 aa20.87■□□□□ 0.93
TOM1-213ENST00000465529 CHGBP05060 677 aa20.87■□□□□ 0.93
TOM1-213ENST00000465529 PDE6AP16499 860 aa20.87■□□□□ 0.93
TOM1-213ENST00000465529 TREML2Q5T2D2 321 aa20.87■□□□□ 0.93
TOM1-213ENST00000465529 RIOK1Q9BRS2 568 aaKnown RBP20.87■□□□□ 0.93
TOM1-213ENST00000465529 IGSF3O75054 1194 aa20.86■□□□□ 0.93
TOM1-213ENST00000465529 USP5P45974 858 aa20.86■□□□□ 0.93
TOM1-213ENST00000465529 SPP2Q13103 211 aa20.86■□□□□ 0.93
TOM1-213ENST00000465529 FASTKD5Q7L8L6 764 aaKnown RBP20.86■□□□□ 0.93
TOM1-213ENST00000465529 CRACR2BQ8N4Y2 399 aaPredicted RBP20.86■□□□□ 0.93
TOM1-213ENST00000465529 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.86■□□□□ 0.93
TOM1-213ENST00000465529 PARK7Q99497 189 aaKnown RBP20.86■□□□□ 0.93
TOM1-213ENST00000465529 MYH7P12883 1935 aa20.86■□□□□ 0.93
TOM1-213ENST00000465529 ZNF532Q9HCE3 1301 aa20.85■□□□□ 0.93
TOM1-213ENST00000465529 BCRP11274 1271 aa20.85■□□□□ 0.93
TOM1-213ENST00000465529 EVX2Q03828 476 aa20.85■□□□□ 0.93
TOM1-213ENST00000465529 TTF1Q15361 905 aaPredicted RBP20.85■□□□□ 0.93
TOM1-213ENST00000465529 SLC9C2Q5TAH2 1124 aa20.85■□□□□ 0.93
TOM1-213ENST00000465529 METTL16Q86W50 562 aaKnown RBP20.85■□□□□ 0.93
TOM1-213ENST00000465529 TRIM47Q96LD4 638 aa20.85■□□□□ 0.93
TOM1-213ENST00000465529 LRRCC1Q9C099 1032 aa20.85■□□□□ 0.93
TOM1-213ENST00000465529 TCRBV5S4A2TA0A5A2 114 aa20.84■□□□□ 0.93
TOM1-213ENST00000465529 POTEFA5A3E0 1075 aa20.84■□□□□ 0.93
TOM1-213ENST00000465529 PSMC4P43686 418 aa20.84■□□□□ 0.93
TOM1-213ENST00000465529 HMGCS2P54868 508 aa20.84■□□□□ 0.93
TOM1-213ENST00000465529 KIF22Q14807 665 aa20.84■□□□□ 0.93
TOM1-213ENST00000465529 ZNF280CQ8ND82 737 aa20.84■□□□□ 0.93
TOM1-213ENST00000465529 PAG1Q9NWQ8 432 aa20.84■□□□□ 0.93
TOM1-213ENST00000465529 RBBP6Q7Z6E9 1792 aaKnown RBP20.83■□□□□ 0.93
TOM1-213ENST00000465529 MAGEB6P1A0A0J9YX57 407 aa20.83■□□□□ 0.93
TOM1-213ENST00000465529 USP17L5A8MUK1 530 aa20.83■□□□□ 0.93
TOM1-213ENST00000465529 HLA-DOAP06340 250 aa20.83■□□□□ 0.93
TOM1-213ENST00000465529 RRP1P56182 461 aaKnown RBP20.83■□□□□ 0.93
TOM1-213ENST00000465529 FOXP4Q8IVH2 680 aaPredicted RBP20.83■□□□□ 0.93
TOM1-213ENST00000465529 LCORLQ8N3X6 602 aa20.83■□□□□ 0.93
TOM1-213ENST00000465529 ARMC5Q96C12 935 aa20.83■□□□□ 0.93
TOM1-213ENST00000465529 TRIM34Q9BYJ4 488 aa20.83■□□□□ 0.93
TOM1-213ENST00000465529 AGTPBP1Q9UPW5 1226 aa20.83■□□□□ 0.93
TOM1-213ENST00000465529 BRCA2P51587 3418 aa20.83■□□□□ 0.92
TOM1-213ENST00000465529 MYCP01106 439 aaPredicted RBP20.82■□□□□ 0.92
TOM1-213ENST00000465529 ATP5JP18859 108 aa20.82■□□□□ 0.92
TOM1-213ENST00000465529 SH3TC2Q8TF17 1288 aa20.82■□□□□ 0.92
TOM1-213ENST00000465529 PCDHB15Q9Y5E8 787 aa20.82■□□□□ 0.92
TOM1-213ENST00000465529 BAZ2AQ9UIF9 1905 aaKnown RBP20.81■□□□□ 0.92
TOM1-213ENST00000465529 OSBPP22059 807 aa20.81■□□□□ 0.92
TOM1-213ENST00000465529 PLCD1P51178 756 aa20.81■□□□□ 0.92
TOM1-213ENST00000465529 MTMR2Q13614 643 aa20.81■□□□□ 0.92
TOM1-213ENST00000465529 ARHGEF6Q15052 776 aa20.81■□□□□ 0.92
TOM1-213ENST00000465529 TSHZ3Q63HK5 1081 aa20.81■□□□□ 0.92
TOM1-213ENST00000465529 SDR42E1Q8WUS8 393 aa20.81■□□□□ 0.92
TOM1-213ENST00000465529 HAUS7Q99871 368 aa20.81■□□□□ 0.92
TOM1-213ENST00000465529 DCTPP1Q9H773 170 aa20.81■□□□□ 0.92
TOM1-213ENST00000465529 ZBTB21Q9ULJ3 1066 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms