RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SPRYD7Q5W111 196 aa24.45■■□□□ 1.5
SKA3-205ENST00000465471 SLC10A4Q96EP9 437 aa24.45■■□□□ 1.5
SKA3-205ENST00000465471 EHD4Q9H223 541 aa24.45■■□□□ 1.5
SKA3-205ENST00000465471 DNAJC18Q9H819 358 aa24.45■■□□□ 1.5
SKA3-205ENST00000465471 GPAA1O43292 621 aa24.44■■□□□ 1.5
SKA3-205ENST00000465471 ZKSCAN4Q969J2 545 aaPredicted RBP24.44■■□□□ 1.5
SKA3-205ENST00000465471 WNK4Q96J92 1243 aa24.44■■□□□ 1.5
SKA3-205ENST00000465471 SEC62Q99442 399 aaKnown RBP24.44■■□□□ 1.5
SKA3-205ENST00000465471 CSADQ9Y600 493 aa24.44■■□□□ 1.5
SKA3-205ENST00000465471 SLC4A4Q9Y6R1 1079 aa24.44■■□□□ 1.5
SKA3-205ENST00000465471 HLA-DOAP06340 250 aa24.43■■□□□ 1.5
SKA3-205ENST00000465471 ZBTB48P10074 688 aaPredicted RBP24.43■■□□□ 1.5
SKA3-205ENST00000465471 GJA5P36382 358 aa24.43■■□□□ 1.5
SKA3-205ENST00000465471 FOXP4Q8IVH2 680 aaPredicted RBP24.43■■□□□ 1.5
SKA3-205ENST00000465471 RILPL2Q969X0 211 aa24.43■■□□□ 1.5
SKA3-205ENST00000465471 ELP3Q9H9T3 547 aa24.43■■□□□ 1.5
SKA3-205ENST00000465471 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.43■■□□□ 1.5
SKA3-205ENST00000465471 ATAD5Q96QE3 1844 aa24.42■■□□□ 1.5
SKA3-205ENST00000465471 SPDYE5A6NIY4 337 aa24.42■■□□□ 1.5
SKA3-205ENST00000465471 FAM196BA6NMK8 535 aa24.42■■□□□ 1.5
SKA3-205ENST00000465471 MCM9Q9NXL9 1143 aa24.42■■□□□ 1.5
SKA3-205ENST00000465471 PHIPQ8WWQ0 1821 aa24.41■■□□□ 1.5
SKA3-205ENST00000465471 GSG1L2A8MUP6 293 aa24.41■■□□□ 1.5
SKA3-205ENST00000465471 GNAT2P19087 354 aa24.41■■□□□ 1.5
SKA3-205ENST00000465471 KIF23Q02241 960 aaPredicted RBP24.41■■□□□ 1.5
SKA3-205ENST00000465471 GIMAP6Q6P9H5 292 aa24.41■■□□□ 1.5
SKA3-205ENST00000465471 TTC6Q86TZ1 520 aa24.41■■□□□ 1.5
SKA3-205ENST00000465471 OPTNQ96CV9 577 aa24.41■■□□□ 1.5
SKA3-205ENST00000465471 HELLSQ9NRZ9 838 aa24.41■■□□□ 1.5
SKA3-205ENST00000465471 PPP4R2Q9NY27 417 aa24.41■■□□□ 1.5
SKA3-205ENST00000465471 A0A0D9SFI3 127 aa24.4■■□□□ 1.5
SKA3-205ENST00000465471 CTNND1O60716 968 aaKnown RBP24.4■■□□□ 1.5
SKA3-205ENST00000465471 SDSP20132 328 aa24.4■■□□□ 1.5
SKA3-205ENST00000465471 PLCD1P51178 756 aa24.4■■□□□ 1.5
SKA3-205ENST00000465471 GABPAQ06546 454 aa24.4■■□□□ 1.5
SKA3-205ENST00000465471 ERO1BQ86YB8 467 aa24.4■■□□□ 1.5
SKA3-205ENST00000465471 SCYL3Q8IZE3 742 aa24.4■■□□□ 1.5
SKA3-205ENST00000465471 CNKSR2Q8WXI2 1034 aa24.4■■□□□ 1.5
SKA3-205ENST00000465471 FAM227BQ96M60 508 aa24.4■■□□□ 1.5
SKA3-205ENST00000465471 SERPINB13Q9UIV8 391 aa24.4■■□□□ 1.5
SKA3-205ENST00000465471 EVX2Q03828 476 aa24.39■■□□□ 1.49
SKA3-205ENST00000465471 RRP1BQ14684 758 aaKnown RBP24.39■■□□□ 1.49
SKA3-205ENST00000465471 SLC4A8Q2Y0W8 1093 aa24.39■■□□□ 1.49
SKA3-205ENST00000465471 EPB41L4AQ9HCS5 686 aaPredicted RBP24.39■■□□□ 1.49
SKA3-205ENST00000465471 WBP1LQ9NX94 342 aa24.39■■□□□ 1.49
SKA3-205ENST00000465471 TAOK2Q9UL54 1235 aa24.39■■□□□ 1.49
SKA3-205ENST00000465471 POLR3DP05423 398 aaPredicted RBP24.38■■□□□ 1.49
SKA3-205ENST00000465471 MAP2K1Q02750 393 aaPredicted RBP24.38■■□□□ 1.49
SKA3-205ENST00000465471 NMIQ13287 307 aaPredicted RBP24.38■■□□□ 1.49
SKA3-205ENST00000465471 REM2Q8IYK8 340 aaPredicted RBP24.38■■□□□ 1.49
SKA3-205ENST00000465471 CRACR2BQ8N4Y2 399 aaPredicted RBP24.38■■□□□ 1.49
SKA3-205ENST00000465471 FOXP2O15409 715 aa24.37■■□□□ 1.49
SKA3-205ENST00000465471 CYP2D6P10635 497 aa24.37■■□□□ 1.49
SKA3-205ENST00000465471 CAP2P40123 477 aa24.37■■□□□ 1.49
SKA3-205ENST00000465471 PPATQ06203 517 aa24.37■■□□□ 1.49
SKA3-205ENST00000465471 MKRN3Q13064 507 aaKnown RBP24.37■■□□□ 1.49
SKA3-205ENST00000465471 PPIL2Q13356 520 aa24.37■■□□□ 1.49
SKA3-205ENST00000465471 C12orf60Q5U649 245 aa24.37■■□□□ 1.49
SKA3-205ENST00000465471 TATDN1Q6P1N9 297 aa24.37■■□□□ 1.49
SKA3-205ENST00000465471 CTR9Q6PD62 1173 aa24.37■■□□□ 1.49
SKA3-205ENST00000465471 CCDC129Q6ZRS4 1044 aa24.37■■□□□ 1.49
SKA3-205ENST00000465471 SKAP1Q86WV1 359 aa24.37■■□□□ 1.49
SKA3-205ENST00000465471 PATL2C9JE40 543 aaKnown RBP24.36■■□□□ 1.49
SKA3-205ENST00000465471 USP17L12C9JPN9 530 aa24.36■■□□□ 1.49
SKA3-205ENST00000465471 USP17L21D6R901 530 aa24.36■■□□□ 1.49
SKA3-205ENST00000465471 PTPRAP18433 802 aa24.36■■□□□ 1.49
SKA3-205ENST00000465471 MCMDC2Q4G0Z9 681 aa24.36■■□□□ 1.49
SKA3-205ENST00000465471 SBK1Q52WX2 424 aa24.36■■□□□ 1.49
SKA3-205ENST00000465471 OTUD5Q96G74 571 aa24.36■■□□□ 1.49
SKA3-205ENST00000465471 DDRGK1Q96HY6 314 aa24.36■■□□□ 1.49
SKA3-205ENST00000465471 ARPP21Q9UBL0 812 aaPredicted RBP24.36■■□□□ 1.49
SKA3-205ENST00000465471 ROBO3Q96MS0 1386 aa24.35■■□□□ 1.49
SKA3-205ENST00000465471 MANSC4A6NHS7 340 aaPredicted RBP24.35■■□□□ 1.49
SKA3-205ENST00000465471 HIP1O00291 1037 aa24.35■■□□□ 1.49
SKA3-205ENST00000465471 SHMT1P34896 483 aa24.35■■□□□ 1.49
SKA3-205ENST00000465471 TM4SF4P48230 202 aa24.35■■□□□ 1.49
SKA3-205ENST00000465471 MS4A4AQ96JQ5 239 aa24.35■■□□□ 1.49
SKA3-205ENST00000465471 TRIM34Q9BYJ4 488 aa24.35■■□□□ 1.49
SKA3-205ENST00000465471 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.35■■□□□ 1.49
SKA3-205ENST00000465471 PTPRFP10586 1907 aa24.35■■□□□ 1.49
SKA3-205ENST00000465471 MYH8P13535 1937 aa24.34■■□□□ 1.49
SKA3-205ENST00000465471 CYP2D7A0A087X1C5 515 aa24.34■■□□□ 1.49
SKA3-205ENST00000465471 TESPA1A2RU30 521 aaPredicted RBP24.34■■□□□ 1.49
SKA3-205ENST00000465471 IRF6O14896 467 aa24.34■■□□□ 1.49
SKA3-205ENST00000465471 ZNF589Q86UQ0 364 aaPredicted RBP24.34■■□□□ 1.49
SKA3-205ENST00000465471 IFNL3Q8IZI9 196 aa24.34■■□□□ 1.49
SKA3-205ENST00000465471 GINM1Q9NU53 330 aa24.34■■□□□ 1.49
SKA3-205ENST00000465471 KCNH4Q9UQ05 1017 aa24.34■■□□□ 1.49
SKA3-205ENST00000465471 SMIM22K7EJ46 135 aa24.33■■□□□ 1.49
SKA3-205ENST00000465471 HSPA1AP0DMV8 641 aaKnown RBP24.33■■□□□ 1.49
SKA3-205ENST00000465471 HSPA1BP0DMV9 641 aaKnown RBP24.33■■□□□ 1.49
SKA3-205ENST00000465471 JAG1P78504 1218 aa24.33■■□□□ 1.49
SKA3-205ENST00000465471 SREBF2Q12772 1141 aa24.33■■□□□ 1.49
SKA3-205ENST00000465471 PICK1Q9NRD5 415 aa24.33■■□□□ 1.49
SKA3-205ENST00000465471 CCDC171Q6TFL3 1326 aa24.33■■□□□ 1.48
SKA3-205ENST00000465471 INHBEP58166 350 aa24.32■■□□□ 1.48
SKA3-205ENST00000465471 VPS53Q5VIR6 699 aa24.32■■□□□ 1.48
SKA3-205ENST00000465471 AMOTL1Q8IY63 956 aa24.32■■□□□ 1.48
SKA3-205ENST00000465471 DIAPH3Q9NSV4 1193 aa24.32■■□□□ 1.48
SKA3-205ENST00000465471 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms