RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 APPP05067 770 aa9.79□□□□□ -0.84
UBE4B-205ENST00000465408 HMGB1P09429 215 aaKnown RBP9.79□□□□□ -0.84
UBE4B-205ENST00000465408 NCLP19338 710 aaKnown RBP9.79□□□□□ -0.84
UBE4B-205ENST00000465408 EXOSC10Q01780 885 aaKnown RBP9.79□□□□□ -0.84
UBE4B-205ENST00000465408 CXCL9Q07325 125 aa9.79□□□□□ -0.84
UBE4B-205ENST00000465408 APOBRQ0VD83 1088 aa9.79□□□□□ -0.84
UBE4B-205ENST00000465408 UBE4AQ14139 1066 aa9.79□□□□□ -0.84
UBE4B-205ENST00000465408 NIM1KQ8IY84 436 aa9.79□□□□□ -0.84
UBE4B-205ENST00000465408 GPHNQ9NQX3 736 aaPredicted RBP9.79□□□□□ -0.84
UBE4B-205ENST00000465408 NAP1L2Q9ULW6 460 aaPredicted RBP9.79□□□□□ -0.84
UBE4B-205ENST00000465408 MTMR6Q9Y217 621 aa9.79□□□□□ -0.84
UBE4B-205ENST00000465408 DDX49Q9Y6V7 483 aaKnown RBP9.79□□□□□ -0.84
UBE4B-205ENST00000465408 ZNF804BA4D1E1 1349 aa9.79□□□□□ -0.84
UBE4B-205ENST00000465408 VPS37CA5D8V6 355 aaPredicted RBP9.78□□□□□ -0.84
UBE4B-205ENST00000465408 ZNF213O14771 459 aa9.78□□□□□ -0.84
UBE4B-205ENST00000465408 CAP1Q01518 475 aa9.78□□□□□ -0.84
UBE4B-205ENST00000465408 TBC1D10CQ8IV04 446 aa9.78□□□□□ -0.84
UBE4B-205ENST00000465408 LCORLQ8N3X6 602 aa9.78□□□□□ -0.84
UBE4B-205ENST00000465408 GTF3C6Q969F1 213 aa9.78□□□□□ -0.84
UBE4B-205ENST00000465408 GUCD1Q96NT3 240 aa9.78□□□□□ -0.84
UBE4B-205ENST00000465408 STRBPQ96SI9 672 aaKnown RBP9.78□□□□□ -0.84
UBE4B-205ENST00000465408 NBPF3Q9H094 633 aa9.78□□□□□ -0.84
UBE4B-205ENST00000465408 GDPD2Q9HCC8 539 aa9.78□□□□□ -0.84
UBE4B-205ENST00000465408 EPB41L4AQ9HCS5 686 aaPredicted RBP9.78□□□□□ -0.84
UBE4B-205ENST00000465408 GNL3LQ9NVN8 582 aaKnown RBP9.78□□□□□ -0.84
UBE4B-205ENST00000465408 RAI14Q9P0K7 980 aa9.78□□□□□ -0.84
UBE4B-205ENST00000465408 LRP2BPQ9P2M1 347 aa9.78□□□□□ -0.84
UBE4B-205ENST00000465408 PRC1O43663 620 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 PRKAB2O43741 272 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 PFKFB2O60825 505 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 F13A1P00488 732 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 CYP7A1P22680 504 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 CCT2P78371 535 aaKnown RBP9.77□□□□□ -0.85
UBE4B-205ENST00000465408 SCRN1Q12765 414 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 KLHL40Q2TBA0 621 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 CAVIN4Q5BKX8 364 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 RALYLQ86SE5 291 aaKnown RBP9.77□□□□□ -0.85
UBE4B-205ENST00000465408 VPS37DQ86XT2 251 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 MB21D2Q8IYB1 491 aaPredicted RBP9.77□□□□□ -0.85
UBE4B-205ENST00000465408 MIGA1Q8NAN2 632 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 NKX2-3Q8TAU0 364 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 GPT2Q8TD30 523 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 SHISA4Q96DD7 197 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 FAM84BQ96KN1 310 aaPredicted RBP9.77□□□□□ -0.85
UBE4B-205ENST00000465408 ANKRD2Q9GZV1 360 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 ABCF2Q9UG63 623 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 DENND2AQ9ULE3 1009 aa9.77□□□□□ -0.85
UBE4B-205ENST00000465408 ZBTB12Q9Y330 459 aaPredicted RBP9.77□□□□□ -0.85
UBE4B-205ENST00000465408 POLR2AP24928 1970 aaKnown RBP9.77□□□□□ -0.85
UBE4B-205ENST00000465408 TAF1P21675 1872 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 A0A1B0GUL6 1792 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 KLRG2A4D1S0 409 aaPredicted RBP9.76□□□□□ -0.85
UBE4B-205ENST00000465408 FOSBP53539 338 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 ANTXR2P58335 489 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 MKRN3Q13064 507 aaKnown RBP9.76□□□□□ -0.85
UBE4B-205ENST00000465408 CHAF1AQ13111 956 aaPredicted RBP9.76□□□□□ -0.85
UBE4B-205ENST00000465408 GRAPQ13588 217 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 LARP1BQ659C4 914 aaKnown RBP9.76□□□□□ -0.85
UBE4B-205ENST00000465408 CAVIN1Q6NZI2 390 aaKnown RBP9.76□□□□□ -0.85
UBE4B-205ENST00000465408 FBXO33Q7Z6M2 555 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 RAB11FIP4Q86YS3 637 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 IFNL3Q8IZI9 196 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 GRAPLQ8TC17 118 aaPredicted RBP9.76□□□□□ -0.85
UBE4B-205ENST00000465408 CD99L2Q8TCZ2 262 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 SYMPKQ92797 1274 aaKnown RBP9.76□□□□□ -0.85
UBE4B-205ENST00000465408 DDX11Q96FC9 970 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 CNPY2Q9Y2B0 182 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 NR2E3Q9Y5X4 410 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 SLC4A4Q9Y6R1 1079 aa9.76□□□□□ -0.85
UBE4B-205ENST00000465408 GOLGA6L3A6NEY3 463 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 GSG1L2A8MUP6 293 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 PATL2C9JE40 543 aaKnown RBP9.75□□□□□ -0.85
UBE4B-205ENST00000465408 GADD45BO75293 160 aaPredicted RBP9.75□□□□□ -0.85
UBE4B-205ENST00000465408 EGFRP00533 1210 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 MCM5P33992 734 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 CTDSPL2Q05D32 466 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 ALX1Q15699 326 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 AOC3Q16853 763 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 MOB2Q70IA6 237 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 CYB5R4Q7L1T6 521 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 SAMD7Q7Z3H4 446 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 ADGRA1Q86SQ6 560 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 FERMT3Q86UX7 667 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 NCOA7Q8NI08 942 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 RPGRQ92834 1020 aaKnown RBP9.75□□□□□ -0.85
UBE4B-205ENST00000465408 AGXT2Q9BYV1 514 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 NAPBQ9H115 298 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 NCOA5Q9HCD5 579 aaKnown RBP9.75□□□□□ -0.85
UBE4B-205ENST00000465408 INCENPQ9NQS7 918 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 CNOT7Q9UIV1 285 aaKnown RBP9.75□□□□□ -0.85
UBE4B-205ENST00000465408 BRPF3Q9ULD4 1205 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 NSFL1CQ9UNZ2 370 aaKnown RBP9.75□□□□□ -0.85
UBE4B-205ENST00000465408 JAG2Q9Y219 1238 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 NEDD4P46934 1319 aa9.75□□□□□ -0.85
UBE4B-205ENST00000465408 MYH7P12883 1935 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 MAGEB6P1A0A0J9YX57 407 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 KLF18A0A0U1RQI7 1052 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 FSD2A1L4K1 749 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 PTPDC1A2A3K4 754 aa9.74□□□□□ -0.85
UBE4B-205ENST00000465408 GOLGA8BA8MQT2 603 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms