RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 SHHQ15465 462 aa18.8■□□□□ 0.6
HDAC6-214ENST00000465269 RFX7Q2KHR2 1363 aa18.8■□□□□ 0.6
HDAC6-214ENST00000465269 IFIT1P09914 478 aaKnown RBP18.79■□□□□ 0.6
HDAC6-214ENST00000465269 GCLCP48506 637 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-214ENST00000465269 MAP3K10Q02779 954 aa18.79■□□□□ 0.6
HDAC6-214ENST00000465269 RRP1BQ14684 758 aaKnown RBP18.79■□□□□ 0.6
HDAC6-214ENST00000465269 USP38Q8NB14 1042 aa18.79■□□□□ 0.6
HDAC6-214ENST00000465269 SRCIN1Q9C0H9 1055 aa18.79■□□□□ 0.6
HDAC6-214ENST00000465269 SENP6Q9GZR1 1112 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-214ENST00000465269 TXNRD2Q9NNW7 524 aa18.79■□□□□ 0.6
HDAC6-214ENST00000465269 CACNA1FO60840 1977 aa18.79■□□□□ 0.6
HDAC6-214ENST00000465269 LOC285556D6RIA3 1793 aa18.78■□□□□ 0.6
HDAC6-214ENST00000465269 ENTPD3O75355 529 aa18.78■□□□□ 0.6
HDAC6-214ENST00000465269 ALDH1L1O75891 902 aa18.78■□□□□ 0.6
HDAC6-214ENST00000465269 FOSL2P15408 326 aa18.78■□□□□ 0.6
HDAC6-214ENST00000465269 PROCA1Q8NCQ7 364 aaPredicted RBP18.78■□□□□ 0.6
HDAC6-214ENST00000465269 IDI2Q9BXS1 227 aa18.78■□□□□ 0.6
HDAC6-214ENST00000465269 MAST2Q6P0Q8 1798 aa18.78■□□□□ 0.6
HDAC6-214ENST00000465269 ZKSCAN1P17029 563 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-214ENST00000465269 RABL6Q3YEC7 729 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-214ENST00000465269 MYH2Q9UKX2 1941 aa18.76■□□□□ 0.59
HDAC6-214ENST00000465269 P2RX7Q99572 595 aaKnown RBP18.76■□□□□ 0.59
HDAC6-214ENST00000465269 MORF4L1Q9UBU8 362 aa18.76■□□□□ 0.59
HDAC6-214ENST00000465269 SALL2Q9Y467 1007 aaPredicted RBP18.76■□□□□ 0.59
HDAC6-214ENST00000465269 NCOR1O75376 2440 aa18.76■□□□□ 0.59
HDAC6-214ENST00000465269 LTBP2Q14767 1821 aa18.76■□□□□ 0.59
HDAC6-214ENST00000465269 SLC5A1P13866 664 aa18.75■□□□□ 0.59
HDAC6-214ENST00000465269 ZNF280CQ8ND82 737 aa18.75■□□□□ 0.59
HDAC6-214ENST00000465269 NUDT12Q9BQG2 462 aa18.75■□□□□ 0.59
HDAC6-214ENST00000465269 PORCNQ9H237 461 aa18.75■□□□□ 0.59
HDAC6-214ENST00000465269 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
HDAC6-214ENST00000465269 FRMPD3Q5JV73 1810 aa18.74■□□□□ 0.59
HDAC6-214ENST00000465269 Q3C1V9 767 aa18.74■□□□□ 0.59
HDAC6-214ENST00000465269 SYMPKQ92797 1274 aaKnown RBP18.74■□□□□ 0.59
HDAC6-214ENST00000465269 PRKRIP1Q9H875 184 aaPredicted RBP18.74■□□□□ 0.59
HDAC6-214ENST00000465269 NDUFB9Q9Y6M9 179 aa18.74■□□□□ 0.59
HDAC6-214ENST00000465269 TNFRSF10AO00220 468 aa18.73■□□□□ 0.59
HDAC6-214ENST00000465269 XRCC5P13010 732 aaKnown RBP18.73■□□□□ 0.59
HDAC6-214ENST00000465269 PHKA1P46020 1223 aa18.73■□□□□ 0.59
HDAC6-214ENST00000465269 RTP1P59025 263 aa18.73■□□□□ 0.59
HDAC6-214ENST00000465269 CCDC184Q52MB2 194 aa18.73■□□□□ 0.59
HDAC6-214ENST00000465269 LPIN2Q92539 896 aa18.73■□□□□ 0.59
HDAC6-214ENST00000465269 USP6NLQ92738 828 aa18.73■□□□□ 0.59
HDAC6-214ENST00000465269 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.73■□□□□ 0.59
HDAC6-214ENST00000465269 ATP11BQ9Y2G3 1177 aa18.73■□□□□ 0.59
HDAC6-214ENST00000465269 UTYO14607 1347 aa18.73■□□□□ 0.59
HDAC6-214ENST00000465269 GAKO14976 1311 aa18.73■□□□□ 0.59
HDAC6-214ENST00000465269 IL16Q14005 1332 aa18.73■□□□□ 0.59
HDAC6-214ENST00000465269 BTDP43251 543 aa18.72■□□□□ 0.59
HDAC6-214ENST00000465269 IRX3P78415 501 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-214ENST00000465269 CCDC27Q2M243 656 aa18.72■□□□□ 0.59
HDAC6-214ENST00000465269 SHROOM1Q2M3G4 852 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-214ENST00000465269 POTEEQ6S8J3 1075 aa18.72■□□□□ 0.59
HDAC6-214ENST00000465269 BADQ92934 168 aa18.72■□□□□ 0.59
HDAC6-214ENST00000465269 PRDM5Q9NQX1 630 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-214ENST00000465269 FLRT1Q9NZU1 646 aa18.72■□□□□ 0.59
HDAC6-214ENST00000465269 ATAD5Q96QE3 1844 aa18.72■□□□□ 0.59
HDAC6-214ENST00000465269 TMEM265A0A087WTH1 108 aa18.71■□□□□ 0.59
HDAC6-214ENST00000465269 JAG1P78504 1218 aa18.71■□□□□ 0.59
HDAC6-214ENST00000465269 PABPC4Q13310 644 aaKnown RBP eCLIP18.71■□□□□ 0.59
HDAC6-214ENST00000465269 MTMR2Q13614 643 aa18.71■□□□□ 0.59
HDAC6-214ENST00000465269 TJAP1Q5JTD0 557 aa18.71■□□□□ 0.59
HDAC6-214ENST00000465269 GPRC5AQ8NFJ5 357 aa18.71■□□□□ 0.59
HDAC6-214ENST00000465269 SOCS4Q8WXH5 440 aa18.71■□□□□ 0.59
HDAC6-214ENST00000465269 PAGR1Q9BTK6 254 aa18.71■□□□□ 0.59
HDAC6-214ENST00000465269 RBPJLQ9UBG7 517 aa18.71■□□□□ 0.59
HDAC6-214ENST00000465269 CHD9Q3L8U1 2897 aa18.71■□□□□ 0.59
HDAC6-214ENST00000465269 EYA2O00167 538 aa18.7■□□□□ 0.58
HDAC6-214ENST00000465269 ADORA1P30542 326 aa18.7■□□□□ 0.58
HDAC6-214ENST00000465269 RFX5P48382 616 aaPredicted RBP18.7■□□□□ 0.58
HDAC6-214ENST00000465269 HERVK_113P62684 666 aa18.7■□□□□ 0.58
HDAC6-214ENST00000465269 PDE3AQ14432 1141 aa18.7■□□□□ 0.58
HDAC6-214ENST00000465269 MORN1Q5T089 497 aa18.7■□□□□ 0.58
HDAC6-214ENST00000465269 ATG9AQ7Z3C6 839 aa18.7■□□□□ 0.58
HDAC6-214ENST00000465269 GPR142Q7Z601 462 aa18.7■□□□□ 0.58
HDAC6-214ENST00000465269 SIL1Q9H173 461 aa18.7■□□□□ 0.58
HDAC6-214ENST00000465269 PRKAG2Q9UGJ0 569 aa18.7■□□□□ 0.58
HDAC6-214ENST00000465269 CNGA1P29973 690 aa18.69■□□□□ 0.58
HDAC6-214ENST00000465269 PLA2G5P39877 138 aa18.69■□□□□ 0.58
HDAC6-214ENST00000465269 RHBDL3P58872 404 aa18.69■□□□□ 0.58
HDAC6-214ENST00000465269 SH3D19Q5HYK7 790 aa18.69■□□□□ 0.58
HDAC6-214ENST00000465269 SH3RF1Q7Z6J0 888 aa18.69■□□□□ 0.58
HDAC6-214ENST00000465269 DZIP1Q86YF9 867 aaKnown RBP18.69■□□□□ 0.58
HDAC6-214ENST00000465269 ABCF2Q9UG63 623 aa18.69■□□□□ 0.58
HDAC6-214ENST00000465269 SALL1Q9NSC2 1324 aa18.69■□□□□ 0.58
HDAC6-214ENST00000465269 USP17L5A8MUK1 530 aa18.68■□□□□ 0.58
HDAC6-214ENST00000465269 CAP2P40123 477 aa18.68■□□□□ 0.58
HDAC6-214ENST00000465269 RGS2P41220 211 aa18.68■□□□□ 0.58
HDAC6-214ENST00000465269 GRIN2CQ14957 1233 aa18.68■□□□□ 0.58
HDAC6-214ENST00000465269 ATP2B3Q16720 1220 aa18.68■□□□□ 0.58
HDAC6-214ENST00000465269 GJC2Q5T442 439 aaPredicted RBP18.68■□□□□ 0.58
HDAC6-214ENST00000465269 ZNF384Q8TF68 577 aa18.68■□□□□ 0.58
HDAC6-214ENST00000465269 APBA2Q99767 749 aa18.68■□□□□ 0.58
HDAC6-214ENST00000465269 OSBPL5Q9H0X9 879 aaPredicted RBP18.68■□□□□ 0.58
HDAC6-214ENST00000465269 TBC1D12O60347 775 aa18.67■□□□□ 0.58
HDAC6-214ENST00000465269 ERVK-9P63128 1117 aa18.67■□□□□ 0.58
HDAC6-214ENST00000465269 ERVK-24P63145 666 aa18.67■□□□□ 0.58
HDAC6-214ENST00000465269 SMAD3P84022 425 aaKnown RBP18.67■□□□□ 0.58
HDAC6-214ENST00000465269 ANO1Q5XXA6 986 aa18.67■□□□□ 0.58
HDAC6-214ENST00000465269 PLEKHH3Q7Z736 793 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms