RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 CEMIPQ8WUJ3 1361 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 PRAMEF22A3QJZ6 481 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L15C9J2P7 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L10C9JJH3 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L13C9JLJ4 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L12C9JPN9 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L11C9JVI0 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L21D6R901 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L18D6R9N7 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L22D6RA61 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L17D6RBQ6 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L19D6RCP7 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L20D6RJB6 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 KHNYNO15037 678 aaKnown RBP7.23□□□□□ -1.25
CMTM1-207ENST00000465057 C21orf2O43822 256 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 EIF5BO60841 1220 aaKnown RBP7.23□□□□□ -1.25
CMTM1-207ENST00000465057 A1BGP04217 495 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 FAM157BP0CG42 384 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 PIP4K2AP48426 406 aaPredicted RBP7.23□□□□□ -1.25
CMTM1-207ENST00000465057 EIF5P55010 431 aaKnown RBP7.23□□□□□ -1.25
CMTM1-207ENST00000465057 USP17L24Q0WX57 530 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 DPYDQ12882 1025 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 C1orf53Q5VUE5 145 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 TBC1D9BQ66K14 1250 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 SCARF2Q96GP6 870 aaPredicted RBP7.23□□□□□ -1.25
CMTM1-207ENST00000465057 PNNQ9H307 717 aaKnown RBP7.23□□□□□ -1.25
CMTM1-207ENST00000465057 HCN2Q9UL51 889 aa7.23□□□□□ -1.25
CMTM1-207ENST00000465057 DCDC2BA2VCK2 349 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 BTBD11A6QL63 1104 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 TOMM70O94826 608 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 STARD3NLO95772 234 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 PPP2R1AP30153 589 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 PRELPP51888 382 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 DCTN1Q14203 1278 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 C1orf229Q6ZS94 237 aaPredicted RBP7.22□□□□□ -1.25
CMTM1-207ENST00000465057 MCM10Q7L590 875 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 C2CD5Q86YS7 1000 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 ANKMY2Q8IV38 441 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 STAG2Q8N3U4 1231 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 GOLGA6L1Q8N7Z2 621 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 NEDD1Q8NHV4 660 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 CFAP53Q96M91 514 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 FMNL2Q96PY5 1086 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 HCN4Q9Y3Q4 1203 aa7.22□□□□□ -1.25
CMTM1-207ENST00000465057 EFSO43281 561 aa7.21□□□□□ -1.26
CMTM1-207ENST00000465057 PPP1R12BO60237 982 aaPredicted RBP7.21□□□□□ -1.26
CMTM1-207ENST00000465057 NEFMP07197 916 aa7.21□□□□□ -1.26
CMTM1-207ENST00000465057 U2AF1L5P0DN76 240 aaPredicted RBP7.21□□□□□ -1.26
CMTM1-207ENST00000465057 IL6STP40189 918 aaPredicted RBP7.21□□□□□ -1.26
CMTM1-207ENST00000465057 HTRA3P83110 453 aa7.21□□□□□ -1.26
CMTM1-207ENST00000465057 U2AF1Q01081 240 aaKnown RBP eCLIP7.21□□□□□ -1.26
CMTM1-207ENST00000465057 LAMC2Q13753 1193 aa7.21□□□□□ -1.26
CMTM1-207ENST00000465057 CCDC82Q8N4S0 544 aa7.21□□□□□ -1.26
CMTM1-207ENST00000465057 GALNT6Q8NCL4 622 aa7.21□□□□□ -1.26
CMTM1-207ENST00000465057 RHPN1Q8TCX5 695 aa7.21□□□□□ -1.26
CMTM1-207ENST00000465057 SCG3Q8WXD2 468 aaKnown RBP7.21□□□□□ -1.26
CMTM1-207ENST00000465057 C2orf49Q9BVC5 232 aaPredicted RBP7.21□□□□□ -1.26
CMTM1-207ENST00000465057 TEX13AQ9BXU3 409 aaPredicted RBP7.21□□□□□ -1.26
CMTM1-207ENST00000465057 RRAGCQ9HB90 399 aa7.21□□□□□ -1.26
CMTM1-207ENST00000465057 A0A087WZG4 1122 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 H0YIN7 160 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 NFKBIEO00221 500 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 HTATSF1O43719 755 aaKnown RBP7.2□□□□□ -1.26
CMTM1-207ENST00000465057 CAMTA2O94983 1202 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 ARAFP10398 606 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 CD33P20138 364 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 PRR5LQ6MZQ0 368 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 LRRC69Q6ZNQ3 347 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 C16orf71Q8IYS4 520 aaPredicted RBP7.2□□□□□ -1.26
CMTM1-207ENST00000465057 TTLL6Q8N841 843 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 EDARADDQ8WWZ3 215 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 ZNF622Q969S3 477 aaKnown RBP eCLIP7.2□□□□□ -1.26
CMTM1-207ENST00000465057 HINFPQ9BQA5 517 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 PHACTR1Q9C0D0 580 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 NEUROD4Q9HD90 331 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 GGA1Q9UJY5 639 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 NUDCQ9Y266 331 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 USP16Q9Y5T5 823 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 DNMT3AQ9Y6K1 912 aaPredicted RBP7.2□□□□□ -1.26
CMTM1-207ENST00000465057 KDM2BQ8NHM5 1336 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 ANKRD36CQ5JPF3 1778 aa7.2□□□□□ -1.26
CMTM1-207ENST00000465057 LAMB2P55268 1798 aa7.19□□□□□ -1.26
CMTM1-207ENST00000465057 SHISA8B8ZZ34 492 aa7.19□□□□□ -1.26
CMTM1-207ENST00000465057 NPHP1O15259 732 aa7.19□□□□□ -1.26
CMTM1-207ENST00000465057 IRX6P78412 446 aaPredicted RBP7.19□□□□□ -1.26
CMTM1-207ENST00000465057 KANK3Q6NY19 840 aa7.19□□□□□ -1.26
CMTM1-207ENST00000465057 BEND7Q8N7W2 519 aaPredicted RBP7.19□□□□□ -1.26
CMTM1-207ENST00000465057 RTF1Q92541 710 aaKnown RBP7.19□□□□□ -1.26
CMTM1-207ENST00000465057 AVENQ9NQS1 362 aaPredicted RBP7.19□□□□□ -1.26
CMTM1-207ENST00000465057 MARK1Q9P0L2 795 aa7.19□□□□□ -1.26
CMTM1-207ENST00000465057 ZBED9Q6R2W3 1325 aa7.19□□□□□ -1.26
CMTM1-207ENST00000465057 CNTNAP5Q8WYK1 1306 aa7.19□□□□□ -1.26
CMTM1-207ENST00000465057 TCERG1O14776 1098 aaKnown RBP7.18□□□□□ -1.26
CMTM1-207ENST00000465057 GDF11O95390 407 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 LMNB1P20700 586 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 RFX1P22670 979 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 IGFBP4P22692 258 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 IRS1P35568 1242 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 SLCO4C1Q6ZQN7 724 aa7.18□□□□□ -1.26
CMTM1-207ENST00000465057 NPM2Q86SE8 214 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms