RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CCDC175P0C221 793 aa14.38□□□□□ -0.11
CLCNKA-204ENST00000464764 TNNT3P45378 269 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-204ENST00000464764 TRIM29Q14134 588 aa14.38□□□□□ -0.11
CLCNKA-204ENST00000464764 CHRNA2Q15822 529 aa14.38□□□□□ -0.11
CLCNKA-204ENST00000464764 CABLES1Q8TDN4 633 aa14.38□□□□□ -0.11
CLCNKA-204ENST00000464764 ZKSCAN3Q9BRR0 538 aa14.38□□□□□ -0.11
CLCNKA-204ENST00000464764 FAN1Q9Y2M0 1017 aa14.38□□□□□ -0.11
CLCNKA-204ENST00000464764 GOLGA6L9A6NEM1 432 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 AFMP43652 599 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 CCDC57Q2TAC2 916 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 KIF4BQ2VIQ3 1234 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 ACRBPQ8NEB7 543 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 AK7Q96M32 723 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 PLEKHA4Q9H4M7 779 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 IDH1O75874 414 aaKnown RBP14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 MCAMP43121 646 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 MORC3Q14149 939 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 IGSF22Q8N9C0 903 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 ENOX1Q8TC92 643 aaKnown RBP14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 IGDCC4Q8TDY8 1250 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 EXOC4Q96A65 974 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 FAM89AQ96GI7 184 aa14.37□□□□□ -0.11
CLCNKA-204ENST00000464764 CD44P16070 742 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 CDC25AP30304 524 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 VSNL1P62760 191 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 CTDSPL2Q05D32 466 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 NOSTRINQ8IVI9 506 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 OXER1Q8TDS5 423 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 FBXO2Q9UK22 296 aaPredicted RBP14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 TACC3Q9Y6A5 838 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 USP54Q70EL1 1684 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 SARSP49591 514 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 TMEM67Q5HYA8 995 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 JAKMIP3Q5VZ66 844 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 APTXQ7Z2E3 356 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 KRT28Q7Z3Y7 464 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 DIS3L2Q8IYB7 885 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 SLC35F6Q8N357 371 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 STAMQ92783 540 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 RASSF4Q9H2L5 321 aa14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 AFDNP55196 1824 aaKnown RBP14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 SIPA1L3O60292 1781 aaPredicted RBP14.36□□□□□ -0.11
CLCNKA-204ENST00000464764 ZFYP08048 801 aaPredicted RBP14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 CASP14P31944 242 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 ACTN2P35609 894 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 NUTM2AQ8IVF1 878 aaPredicted RBP14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 GOLGA5Q8TBA6 731 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 LY9Q9HBG7 655 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 CDC23Q9UJX2 597 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 FAM205CA6NFA0 338 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 RNF225M0QZC1 329 aaPredicted RBP14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 BRD3Q15059 726 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 CPLX2Q6PUV4 134 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 MLKLQ8NB16 471 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 DCAF5Q96JK2 942 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 ATG3Q9NT62 314 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 RRP15Q9Y3B9 282 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 MEGF6O75095 1541 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 A0A087X0B3 334 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 A0A1B0GTH6 734 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 CDKL5O76039 1030 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 FXR1P51114 621 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 TAF7LQ5H9L4 462 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 SRLQ86TD4 932 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 NOA1Q8NC60 698 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 RGS22Q8NE09 1264 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 EPSTI1Q96J88 318 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 CSRNP2Q9H175 543 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 PIH1D3Q9NQM4 214 aaKnown RBP14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 ZSWIM5Q9P217 1185 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 L1RE1Q9UN81 338 aa14.35□□□□□ -0.11
CLCNKA-204ENST00000464764 KIF5CO60282 957 aa14.34□□□□□ -0.11
CLCNKA-204ENST00000464764 SSRP1Q08945 709 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-204ENST00000464764 PPFIBP1Q86W92 1011 aa14.34□□□□□ -0.11
CLCNKA-204ENST00000464764 ACTN4O43707 911 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-204ENST00000464764 CIAO1O76071 339 aa14.34□□□□□ -0.11
CLCNKA-204ENST00000464764 PTPREP23469 700 aa14.34□□□□□ -0.11
CLCNKA-204ENST00000464764 CCT6AP40227 531 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-204ENST00000464764 RRP12Q5JTH9 1297 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-204ENST00000464764 IPO4Q8TEX9 1081 aaKnown RBP14.34□□□□□ -0.11
CLCNKA-204ENST00000464764 CCDC102AQ96A19 550 aa14.34□□□□□ -0.11
CLCNKA-204ENST00000464764 IFIT3O14879 490 aaKnown RBP14.33□□□□□ -0.11
CLCNKA-204ENST00000464764 NCAPH2Q6IBW4 605 aa14.33□□□□□ -0.11
CLCNKA-204ENST00000464764 HDXQ7Z353 690 aa14.33□□□□□ -0.11
CLCNKA-204ENST00000464764 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.33□□□□□ -0.11
CLCNKA-204ENST00000464764 CABP5Q9NP86 173 aa14.33□□□□□ -0.11
CLCNKA-204ENST00000464764 WWC3Q9ULE0 1092 aa14.33□□□□□ -0.11
CLCNKA-204ENST00000464764 hCG_1642624A0A1W2PR95 340 aa14.33□□□□□ -0.12
CLCNKA-204ENST00000464764 NT5DC1Q5TFE4 455 aa14.33□□□□□ -0.12
CLCNKA-204ENST00000464764 GDAP1L1Q96MZ0 367 aa14.33□□□□□ -0.12
CLCNKA-204ENST00000464764 TFR2Q9UP52 801 aa14.33□□□□□ -0.12
CLCNKA-204ENST00000464764 SLC12A7Q9Y666 1083 aa14.33□□□□□ -0.12
CLCNKA-204ENST00000464764 ZNF532Q9HCE3 1301 aa14.33□□□□□ -0.12
CLCNKA-204ENST00000464764 MYO1BO43795 1136 aa14.33□□□□□ -0.12
CLCNKA-204ENST00000464764 ADD2P35612 726 aa14.33□□□□□ -0.12
CLCNKA-204ENST00000464764 PLCD1P51178 756 aa14.33□□□□□ -0.12
CLCNKA-204ENST00000464764 TOMM22Q9NS69 142 aa14.33□□□□□ -0.12
CLCNKA-204ENST00000464764 LRRIQ3A6PVS8 624 aaPredicted RBP14.32□□□□□ -0.12
CLCNKA-204ENST00000464764 PANX2Q96RD6 677 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms