RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 ZBED9Q6R2W3 1325 aa16.9■□□□□ 0.3
RPP40-203ENST00000464646 RFX7Q2KHR2 1363 aa16.89■□□□□ 0.3
RPP40-203ENST00000464646 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.3
RPP40-203ENST00000464646 MYO5AQ9Y4I1 1855 aaKnown RBP16.89■□□□□ 0.29
RPP40-203ENST00000464646 CYP2E1P05181 493 aaPredicted RBP16.89■□□□□ 0.29
RPP40-203ENST00000464646 CYP7A1P22680 504 aa16.89■□□□□ 0.29
RPP40-203ENST00000464646 SPP2Q13103 211 aa16.89■□□□□ 0.29
RPP40-203ENST00000464646 MOGSQ13724 837 aa16.89■□□□□ 0.29
RPP40-203ENST00000464646 AACSQ86V21 672 aa16.89■□□□□ 0.29
RPP40-203ENST00000464646 TLR7Q9NYK1 1049 aaKnown RBP16.89■□□□□ 0.29
RPP40-203ENST00000464646 SRRDQ9UH36 339 aa16.89■□□□□ 0.29
RPP40-203ENST00000464646 SAP30BPQ9UHR5 308 aaKnown RBP16.89■□□□□ 0.29
RPP40-203ENST00000464646 TBC1D12O60347 775 aa16.88■□□□□ 0.29
RPP40-203ENST00000464646 MS4A1P11836 297 aa16.88■□□□□ 0.29
RPP40-203ENST00000464646 USP5P45974 858 aa16.88■□□□□ 0.29
RPP40-203ENST00000464646 CEP85Q6P2H3 762 aa16.88■□□□□ 0.29
RPP40-203ENST00000464646 AS3MTQ9HBK9 375 aa16.88■□□□□ 0.29
RPP40-203ENST00000464646 PIH1D3Q9NQM4 214 aaKnown RBP16.88■□□□□ 0.29
RPP40-203ENST00000464646 PI4KBQ9UBF8 816 aa16.88■□□□□ 0.29
RPP40-203ENST00000464646 DBNLQ9UJU6 430 aaKnown RBP16.88■□□□□ 0.29
RPP40-203ENST00000464646 NDUFB9Q9Y6M9 179 aa16.88■□□□□ 0.29
RPP40-203ENST00000464646 ATAD5Q96QE3 1844 aa16.87■□□□□ 0.29
RPP40-203ENST00000464646 USP17L5A8MUK1 530 aa16.87■□□□□ 0.29
RPP40-203ENST00000464646 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
RPP40-203ENST00000464646 HLA-DOAP06340 250 aa16.87■□□□□ 0.29
RPP40-203ENST00000464646 CTGFP29279 349 aa16.87■□□□□ 0.29
RPP40-203ENST00000464646 GRK4P32298 578 aa16.87■□□□□ 0.29
RPP40-203ENST00000464646 DYNLL1P63167 89 aaKnown RBP16.87■□□□□ 0.29
RPP40-203ENST00000464646 UBXN2AP68543 259 aa16.87■□□□□ 0.29
RPP40-203ENST00000464646 ERC1Q8IUD2 1116 aa16.87■□□□□ 0.29
RPP40-203ENST00000464646 EAF2Q96CJ1 260 aaPredicted RBP16.87■□□□□ 0.29
RPP40-203ENST00000464646 DHX36Q9H2U1 1008 aaKnown RBP16.87■□□□□ 0.29
RPP40-203ENST00000464646 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
RPP40-203ENST00000464646 PNMA3Q9UL41 463 aa16.87■□□□□ 0.29
RPP40-203ENST00000464646 NOP58Q9Y2X3 529 aaKnown RBP16.87■□□□□ 0.29
RPP40-203ENST00000464646 MGAMO43451 1857 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 TNPO2O14787 897 aaKnown RBP16.86■□□□□ 0.29
RPP40-203ENST00000464646 CAP2P40123 477 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 HMGCS2P54868 508 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 MAP3K10Q02779 954 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 PRKCZQ05513 592 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 MTFR1Q15390 333 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 ANKRD13CQ8N6S4 541 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 MAGEB6Q8N7X4 407 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 MIGA1Q8NAN2 632 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 ZNF280CQ8ND82 737 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 HERC5Q9UII4 1024 aaKnown RBP16.86■□□□□ 0.29
RPP40-203ENST00000464646 PALD1Q9ULE6 856 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 AGTPBP1Q9UPW5 1226 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 MAST2Q6P0Q8 1798 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 PTPRFP10586 1907 aa16.86■□□□□ 0.29
RPP40-203ENST00000464646 GDF11O95390 407 aa16.85■□□□□ 0.29
RPP40-203ENST00000464646 BCRP11274 1271 aa16.85■□□□□ 0.29
RPP40-203ENST00000464646 PABPC4Q13310 644 aaKnown RBP eCLIP16.85■□□□□ 0.29
RPP40-203ENST00000464646 HSP90AB4PQ58FF6 505 aa16.85■□□□□ 0.29
RPP40-203ENST00000464646 TREML2Q5T2D2 321 aa16.85■□□□□ 0.29
RPP40-203ENST00000464646 ADGRA1Q86SQ6 560 aa16.85■□□□□ 0.29
RPP40-203ENST00000464646 TMOD4Q9NZQ9 345 aa16.85■□□□□ 0.29
RPP40-203ENST00000464646 COG6Q9Y2V7 657 aa16.85■□□□□ 0.29
RPP40-203ENST00000464646 FLT1P17948 1338 aa16.85■□□□□ 0.29
RPP40-203ENST00000464646 ADGRA2Q96PE1 1338 aa16.85■□□□□ 0.29
RPP40-203ENST00000464646 RBBP6Q7Z6E9 1792 aaKnown RBP16.84■□□□□ 0.29
RPP40-203ENST00000464646 PHIPQ8WWQ0 1821 aa16.84■□□□□ 0.29
RPP40-203ENST00000464646 MAP3K12Q12852 859 aa16.84■□□□□ 0.29
RPP40-203ENST00000464646 COA7Q96BR5 231 aa16.84■□□□□ 0.29
RPP40-203ENST00000464646 ZNF512BQ96KM6 892 aaPredicted RBP16.84■□□□□ 0.29
RPP40-203ENST00000464646 TBC1D2Q9BYX2 928 aa16.84■□□□□ 0.29
RPP40-203ENST00000464646 RNF208Q9H0X6 261 aa16.84■□□□□ 0.29
RPP40-203ENST00000464646 GABRQQ9UN88 632 aa16.84■□□□□ 0.29
RPP40-203ENST00000464646 SLC45A1Q9Y2W3 748 aa16.84■□□□□ 0.29
RPP40-203ENST00000464646 HMMRO75330 724 aa16.83■□□□□ 0.28
RPP40-203ENST00000464646 SLC34A2O95436 690 aa16.83■□□□□ 0.28
RPP40-203ENST00000464646 PPP4CP60510 307 aa16.83■□□□□ 0.28
RPP40-203ENST00000464646 IRX3P78415 501 aaPredicted RBP16.83■□□□□ 0.28
RPP40-203ENST00000464646 FOXP4Q8IVH2 680 aaPredicted RBP16.83■□□□□ 0.28
RPP40-203ENST00000464646 DNAJC2Q99543 621 aaKnown RBP16.83■□□□□ 0.28
RPP40-203ENST00000464646 CDK5RAP2Q96SN8 1893 aa16.82■□□□□ 0.28
RPP40-203ENST00000464646 COL2A1P02458 1487 aaPredicted RBP16.82■□□□□ 0.28
RPP40-203ENST00000464646 ADCY3O60266 1144 aa16.82■□□□□ 0.28
RPP40-203ENST00000464646 ASNSP08243 561 aa16.82■□□□□ 0.28
RPP40-203ENST00000464646 IFIT2P09913 472 aaKnown RBP16.82■□□□□ 0.28
RPP40-203ENST00000464646 CCL5P13501 91 aa16.82■□□□□ 0.28
RPP40-203ENST00000464646 FLT3LGP49771 235 aa16.82■□□□□ 0.28
RPP40-203ENST00000464646 MTMR2Q13614 643 aa16.82■□□□□ 0.28
RPP40-203ENST00000464646 RRP1BQ14684 758 aaKnown RBP16.82■□□□□ 0.28
RPP40-203ENST00000464646 CLASRPQ8N2M8 674 aaKnown RBP16.82■□□□□ 0.28
RPP40-203ENST00000464646 PROCA1Q8NCQ7 364 aaPredicted RBP16.82■□□□□ 0.28
RPP40-203ENST00000464646 RHPN1Q8TCX5 695 aa16.82■□□□□ 0.28
RPP40-203ENST00000464646 GCC1Q96CN9 775 aa16.82■□□□□ 0.28
RPP40-203ENST00000464646 ANTXR1Q9H6X2 564 aa16.82■□□□□ 0.28
RPP40-203ENST00000464646 DDX19BQ9UMR2 479 aa16.82■□□□□ 0.28
RPP40-203ENST00000464646 MYH1P12882 1939 aa16.82■□□□□ 0.28
RPP40-203ENST00000464646 ELNP15502 786 aa16.81■□□□□ 0.28
RPP40-203ENST00000464646 CCAR1Q8IX12 1150 aaKnown RBP16.81■□□□□ 0.28
RPP40-203ENST00000464646 SLAIN1Q8ND83 568 aa16.81■□□□□ 0.28
RPP40-203ENST00000464646 NKX2-3Q8TAU0 364 aa16.81■□□□□ 0.28
RPP40-203ENST00000464646 DPF3Q92784 378 aa16.81■□□□□ 0.28
RPP40-203ENST00000464646 ZYXQ15942 572 aaKnown RBP16.8■□□□□ 0.28
RPP40-203ENST00000464646 KIF1BPQ96EK5 621 aa16.8■□□□□ 0.28
RPP40-203ENST00000464646 FEZ1Q99689 392 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms