RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 CUTAO60888 179 aa12.68□□□□□ -0.38
PITRM1-209ENST00000464395 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
PITRM1-209ENST00000464395 SARSP49591 514 aaKnown RBP12.68□□□□□ -0.38
PITRM1-209ENST00000464395 NPY5RQ15761 445 aa12.68□□□□□ -0.38
PITRM1-209ENST00000464395 LONRF3Q496Y0 759 aa12.68□□□□□ -0.38
PITRM1-209ENST00000464395 SYNE3Q6ZMZ3 975 aa12.68□□□□□ -0.38
PITRM1-209ENST00000464395 MFSD6Q6ZSS7 791 aa12.68□□□□□ -0.38
PITRM1-209ENST00000464395 SLC12A7Q9Y666 1083 aa12.68□□□□□ -0.38
PITRM1-209ENST00000464395 NEMFO60524 1076 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 FAM84BQ96KN1 310 aaPredicted RBP12.67□□□□□ -0.38
PITRM1-209ENST00000464395 MED15Q96RN5 788 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 SDF4Q9BRK5 362 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
PITRM1-209ENST00000464395 IMPACTQ9P2X3 320 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 PDS5AQ29RF7 1337 aaKnown RBP12.67□□□□□ -0.38
PITRM1-209ENST00000464395 BTBD18B2RXH4 712 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 IGHMBP2P38935 993 aaKnown RBP12.67□□□□□ -0.38
PITRM1-209ENST00000464395 SSRP1Q08945 709 aaKnown RBP12.67□□□□□ -0.38
PITRM1-209ENST00000464395 FBXO33Q7Z6M2 555 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 TNFRSF25Q93038 417 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 ZKSCAN3Q9BRR0 538 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 XPO4Q9C0E2 1151 aaKnown RBP12.67□□□□□ -0.38
PITRM1-209ENST00000464395 MINPP1Q9UNW1 487 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 CNTNAP4Q9C0A0 1308 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 CCDC69A6NI79 296 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 PTPREP23469 700 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 EVX2Q03828 476 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 UBE4AQ14139 1066 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 MIGA1Q8NAN2 632 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 SPATA20Q8TB22 786 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 SLC26A6Q9BXS9 759 aa12.67□□□□□ -0.38
PITRM1-209ENST00000464395 FOXN1O15353 648 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 SYKP43405 635 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 GYG1P46976 350 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 PDE4BQ07343 736 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 PNOCQ13519 176 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 KRBA2Q6ZNG9 492 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 OXER1Q8TDS5 423 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 SDR42E1Q8WUS8 393 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 NAT10Q9H0A0 1025 aaKnown RBP12.66□□□□□ -0.38
PITRM1-209ENST00000464395 TMX1Q9H3N1 280 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.66□□□□□ -0.38
PITRM1-209ENST00000464395 KLRK1P26718 216 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 DNTTIP2Q5QJE6 756 aaKnown RBP12.66□□□□□ -0.38
PITRM1-209ENST00000464395 PTF1AQ7RTS3 328 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 FANCBQ8NB91 859 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 BRIP1Q9BX63 1249 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 INTS13Q9NVM9 706 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 KCNJ14Q9UNX9 436 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 KCNJ6P48051 423 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 SYCP1Q15431 976 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 EARS2Q5JPH6 523 aaKnown RBP12.66□□□□□ -0.38
PITRM1-209ENST00000464395 DRC7Q8IY82 874 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 ZNF654Q8IZM8 581 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
PITRM1-209ENST00000464395 DPF2Q92785 391 aa12.66□□□□□ -0.38
PITRM1-209ENST00000464395 CDC5LQ99459 802 aaKnown RBP12.66□□□□□ -0.38
PITRM1-209ENST00000464395 TM4SF1P30408 202 aa12.65□□□□□ -0.38
PITRM1-209ENST00000464395 WTAPQ15007 396 aa12.65□□□□□ -0.38
PITRM1-209ENST00000464395 RTN1Q16799 776 aa12.65□□□□□ -0.38
PITRM1-209ENST00000464395 E4F1Q66K89 784 aaPredicted RBP12.65□□□□□ -0.38
PITRM1-209ENST00000464395 CCAR2Q8N163 923 aaKnown RBP12.65□□□□□ -0.38
PITRM1-209ENST00000464395 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
PITRM1-209ENST00000464395 ENAHQ8N8S7 591 aaPredicted RBP12.65□□□□□ -0.38
PITRM1-209ENST00000464395 CELF1Q92879 486 aaKnown RBP12.65□□□□□ -0.38
PITRM1-209ENST00000464395 FOCADQ5VW36 1801 aa12.65□□□□□ -0.38
PITRM1-209ENST00000464395 SMTNL1A8MU46 457 aa12.65□□□□□ -0.38
PITRM1-209ENST00000464395 BIN1O00499 593 aa12.65□□□□□ -0.38
PITRM1-209ENST00000464395 WNT7AO00755 349 aa12.65□□□□□ -0.38
PITRM1-209ENST00000464395 ATP1A3P13637 1013 aa12.65□□□□□ -0.38
PITRM1-209ENST00000464395 MTERF4Q7Z6M4 381 aaKnown RBP12.65□□□□□ -0.38
PITRM1-209ENST00000464395 DIS3L2Q8IYB7 885 aaKnown RBP12.65□□□□□ -0.38
PITRM1-209ENST00000464395 PHF20Q9BVI0 1012 aa12.65□□□□□ -0.38
PITRM1-209ENST00000464395 PCDHB6Q9Y5E3 794 aa12.65□□□□□ -0.38
PITRM1-209ENST00000464395 NAV1Q8NEY1 1877 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 BECN2A8MW95 431 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 DEXIO95424 95 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 SKILP12757 684 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 CYP7A1P22680 504 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 DYNLL1P63167 89 aaKnown RBP12.64□□□□□ -0.39
PITRM1-209ENST00000464395 TROAPQ12815 778 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 NR5A1Q13285 461 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 NFXL1Q6ZNB6 911 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 C16orf45Q96MC5 204 aaPredicted RBP12.64□□□□□ -0.39
PITRM1-209ENST00000464395 IFNKQ9P0W0 207 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 ACTN4O43707 911 aaKnown RBP12.64□□□□□ -0.39
PITRM1-209ENST00000464395 NCBP1Q09161 790 aaKnown RBP12.64□□□□□ -0.39
PITRM1-209ENST00000464395 TBC1D9BQ66K14 1250 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 CTR9Q6PD62 1173 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 TMTC2Q8N394 836 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 NSUN4Q96CB9 384 aaKnown RBP12.64□□□□□ -0.39
PITRM1-209ENST00000464395 RNF26Q9BY78 433 aaPredicted RBP12.64□□□□□ -0.39
PITRM1-209ENST00000464395 KCNH3Q9ULD8 1083 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 LTBP1Q14766 1721 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 TNKSO95271 1327 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 TNNT1P13805 278 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 TDO2P48775 406 aa12.64□□□□□ -0.39
PITRM1-209ENST00000464395 CPLX2Q6PUV4 134 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms