RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 NT5C2P49902 561 aa22.32■■□□□ 1.16
CCDC78-206ENST00000463539 CCT2P78371 535 aaKnown RBP22.32■■□□□ 1.16
CCDC78-206ENST00000463539 SGMS1Q86VZ5 419 aa22.32■■□□□ 1.16
CCDC78-206ENST00000463539 TNPO1Q92973 898 aaKnown RBP22.32■■□□□ 1.16
CCDC78-206ENST00000463539 ZKSCAN3Q9BRR0 538 aa22.32■■□□□ 1.16
CCDC78-206ENST00000463539 ADAMTSL1Q8N6G6 1762 aa22.32■■□□□ 1.16
CCDC78-206ENST00000463539 PLCD1P51178 756 aa22.31■■□□□ 1.16
CCDC78-206ENST00000463539 WTAPQ15007 396 aa22.31■■□□□ 1.16
CCDC78-206ENST00000463539 NFKBIBQ15653 356 aa22.31■■□□□ 1.16
CCDC78-206ENST00000463539 LLPHQ9BRT6 129 aaKnown RBP22.31■■□□□ 1.16
CCDC78-206ENST00000463539 FHDC1Q9C0D6 1143 aaPredicted RBP22.31■■□□□ 1.16
CCDC78-206ENST00000463539 PCDHAC2Q9Y5I4 1007 aa22.31■■□□□ 1.16
CCDC78-206ENST00000463539 DDX60LQ5H9U9 1706 aaKnown RBP22.31■■□□□ 1.16
CCDC78-206ENST00000463539 RASSF7Q02833 373 aa22.31■■□□□ 1.16
CCDC78-206ENST00000463539 IQCA1Q86XH1 822 aa22.31■■□□□ 1.16
CCDC78-206ENST00000463539 DYNLL2Q96FJ2 89 aa22.31■■□□□ 1.16
CCDC78-206ENST00000463539 GMLQ99445 158 aa22.31■■□□□ 1.16
CCDC78-206ENST00000463539 ZNF287Q9HBT7 754 aa22.31■■□□□ 1.16
CCDC78-206ENST00000463539 SENP2Q9HC62 589 aa22.31■■□□□ 1.16
CCDC78-206ENST00000463539 NCOA5Q9HCD5 579 aaKnown RBP22.31■■□□□ 1.16
CCDC78-206ENST00000463539 TNKSO95271 1327 aa22.31■■□□□ 1.16
CCDC78-206ENST00000463539 CCDC69A6NI79 296 aa22.3■■□□□ 1.16
CCDC78-206ENST00000463539 CXCL9Q07325 125 aa22.3■■□□□ 1.16
CCDC78-206ENST00000463539 CFAP100Q494V2 611 aa22.3■■□□□ 1.16
CCDC78-206ENST00000463539 OGFOD1Q8N543 542 aa22.3■■□□□ 1.16
CCDC78-206ENST00000463539 ZSCAN10Q96SZ4 725 aaPredicted RBP22.3■■□□□ 1.16
CCDC78-206ENST00000463539 MKNK2Q9HBH9 465 aa22.3■■□□□ 1.16
CCDC78-206ENST00000463539 DDX4Q9NQI0 724 aaKnown RBP22.3■■□□□ 1.16
CCDC78-206ENST00000463539 HDAC9Q9UKV0 1011 aa22.3■■□□□ 1.16
CCDC78-206ENST00000463539 HPS5Q9UPZ3 1129 aa22.3■■□□□ 1.16
CCDC78-206ENST00000463539 PSME4Q14997 1843 aa22.3■■□□□ 1.16
CCDC78-206ENST00000463539 DHX16O60231 1041 aaKnown RBP22.29■■□□□ 1.16
CCDC78-206ENST00000463539 DTNBO60941 627 aa22.29■■□□□ 1.16
CCDC78-206ENST00000463539 APOA5Q6Q788 366 aa22.29■■□□□ 1.16
CCDC78-206ENST00000463539 TMTC2Q8N394 836 aa22.29■■□□□ 1.16
CCDC78-206ENST00000463539 AGBL3Q8NEM8 1001 aa22.29■■□□□ 1.16
CCDC78-206ENST00000463539 ZBTB12Q9Y330 459 aaPredicted RBP22.29■■□□□ 1.16
CCDC78-206ENST00000463539 SLC12A7Q9Y666 1083 aa22.29■■□□□ 1.16
CCDC78-206ENST00000463539 NBR1Q14596 966 aa22.29■■□□□ 1.16
CCDC78-206ENST00000463539 CIAPIN1Q6FI81 312 aa22.29■■□□□ 1.16
CCDC78-206ENST00000463539 OSBPL5Q9H0X9 879 aaPredicted RBP22.29■■□□□ 1.16
CCDC78-206ENST00000463539 ZDHHC9Q9Y397 364 aa22.29■■□□□ 1.16
CCDC78-206ENST00000463539 TSPY2A6NKD2 308 aa22.28■■□□□ 1.16
CCDC78-206ENST00000463539 ZBTB43O43298 467 aa22.28■■□□□ 1.16
CCDC78-206ENST00000463539 JAK2O60674 1132 aa22.28■■□□□ 1.16
CCDC78-206ENST00000463539 BRD1O95696 1058 aa22.28■■□□□ 1.16
CCDC78-206ENST00000463539 METAP2P50579 478 aaKnown RBP eCLIP22.28■■□□□ 1.16
CCDC78-206ENST00000463539 NFIAQ12857 509 aa22.28■■□□□ 1.16
CCDC78-206ENST00000463539 FAM47AQ5JRC9 791 aa22.28■■□□□ 1.16
CCDC78-206ENST00000463539 C16orf86Q6ZW13 317 aa22.28■■□□□ 1.16
CCDC78-206ENST00000463539 TTC6Q86TZ1 520 aa22.28■■□□□ 1.16
CCDC78-206ENST00000463539 RAB11FIP4Q86YS3 637 aa22.28■■□□□ 1.16
CCDC78-206ENST00000463539 NSUN7Q8NE18 718 aaKnown RBP22.28■■□□□ 1.16
CCDC78-206ENST00000463539 WDR33Q9C0J8 1336 aaKnown RBP22.28■■□□□ 1.16
CCDC78-206ENST00000463539 SYT1P21579 422 aa22.27■■□□□ 1.16
CCDC78-206ENST00000463539 TNIP1Q15025 636 aa22.27■■□□□ 1.16
CCDC78-206ENST00000463539 SYNE3Q6ZMZ3 975 aa22.27■■□□□ 1.16
CCDC78-206ENST00000463539 MICU3Q86XE3 530 aa22.27■■□□□ 1.16
CCDC78-206ENST00000463539 ENAHQ8N8S7 591 aaPredicted RBP22.27■■□□□ 1.16
CCDC78-206ENST00000463539 SLC44A5Q8NCS7 719 aa22.27■■□□□ 1.16
CCDC78-206ENST00000463539 CDK5RAP2Q96SN8 1893 aa22.27■■□□□ 1.16
CCDC78-206ENST00000463539 PTPDC1A2A3K4 754 aa22.27■■□□□ 1.15
CCDC78-206ENST00000463539 STX6O43752 255 aa22.27■■□□□ 1.15
CCDC78-206ENST00000463539 PDCP20941 246 aa22.27■■□□□ 1.15
CCDC78-206ENST00000463539 SEC23AQ15436 765 aa22.27■■□□□ 1.15
CCDC78-206ENST00000463539 SMARCC2Q8TAQ2 1214 aa22.27■■□□□ 1.15
CCDC78-206ENST00000463539 GBP4Q96PP9 640 aa22.27■■□□□ 1.15
CCDC78-206ENST00000463539 IDI2Q9BXS1 227 aa22.27■■□□□ 1.15
CCDC78-206ENST00000463539 CPLX1O14810 134 aa22.26■■□□□ 1.15
CCDC78-206ENST00000463539 CTDNEP1O95476 244 aa22.26■■□□□ 1.15
CCDC78-206ENST00000463539 CACNB3P54284 484 aa22.26■■□□□ 1.15
CCDC78-206ENST00000463539 HMGN5P82970 282 aaKnown RBP22.26■■□□□ 1.15
CCDC78-206ENST00000463539 ZNF444Q8N0Y2 327 aaPredicted RBP22.26■■□□□ 1.15
CCDC78-206ENST00000463539 FOCADQ5VW36 1801 aa22.26■■□□□ 1.15
CCDC78-206ENST00000463539 ARFGEF1Q9Y6D6 1849 aa22.25■■□□□ 1.15
CCDC78-206ENST00000463539 SPDYE2BA6NHP3 402 aa22.25■■□□□ 1.15
CCDC78-206ENST00000463539 SPDYE6P0CI01 402 aa22.25■■□□□ 1.15
CCDC78-206ENST00000463539 CDK8P49336 464 aa22.25■■□□□ 1.15
CCDC78-206ENST00000463539 TFAP4Q01664 338 aa22.25■■□□□ 1.15
CCDC78-206ENST00000463539 IFIT1BQ5T764 474 aaKnown RBP22.25■■□□□ 1.15
CCDC78-206ENST00000463539 DDX11Q96FC9 970 aa22.25■■□□□ 1.15
CCDC78-206ENST00000463539 PRMT6Q96LA8 375 aaPredicted RBP22.25■■□□□ 1.15
CCDC78-206ENST00000463539 GOLGA8AA7E2F4 631 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 NPM3O75607 178 aaKnown RBP22.24■■□□□ 1.15
CCDC78-206ENST00000463539 HLA-DOAP06340 250 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 PDIA4P13667 645 aaKnown RBP22.24■■□□□ 1.15
CCDC78-206ENST00000463539 RXRAP19793 462 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 DLGAP5Q15398 846 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 FOXD4L5Q5VV16 416 aaPredicted RBP22.24■■□□□ 1.15
CCDC78-206ENST00000463539 LARP1BQ659C4 914 aaKnown RBP22.24■■□□□ 1.15
CCDC78-206ENST00000463539 FAM184AQ8NB25 1140 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 FOXD4L4Q8WXT5 416 aaPredicted RBP22.24■■□□□ 1.15
CCDC78-206ENST00000463539 MYL10Q9BUA6 226 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 TDRD3Q9H7E2 651 aaKnown RBP22.24■■□□□ 1.15
CCDC78-206ENST00000463539 TSPY3P0CV98 308 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 TSPY8P0CW00 308 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 RASA1P20936 1047 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 PRELPP51888 382 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 RCAN1P53805 252 aa22.24■■□□□ 1.15
CCDC78-206ENST00000463539 ZNF654Q8IZM8 581 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms