RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 TRIOBPQ9H2D6 2365 aa10.07□□□□□ -0.8
GARNL3-212ENST00000463005 HTTP42858 3142 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 AK9Q5TCS8 1911 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 TCP10L2B9ZVM9 353 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 PLIN1O60240 522 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 CRKP46108 304 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 GUCA2AQ02747 115 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 SNAPC2Q13487 334 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 TAF7LQ5H9L4 462 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 FAM83AQ86UY5 434 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 SH3TC2Q8TF17 1288 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 TMEM39BQ9GZU3 492 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 JAG2Q9Y219 1238 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 PCDHB15Q9Y5E8 787 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 CENPFP49454 3210 aa10.06□□□□□ -0.8
GARNL3-212ENST00000463005 BTBD19C9JJ37 291 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 MYCP01106 439 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-212ENST00000463005 PPATQ06203 517 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 PPIL2Q13356 520 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 QPCTQ16769 361 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 CCDC184Q52MB2 194 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 FKBP1CQ5VVH2 108 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 DCAF15Q66K64 600 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 LMBR1LQ6UX01 489 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 C17orf99Q6UX52 265 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 ZNF687Q8N1G0 1237 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 TBC1D22AQ8WUA7 517 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 TSR2Q969E8 191 aaKnown RBP10.05□□□□□ -0.8
GARNL3-212ENST00000463005 FAM84BQ96KN1 310 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-212ENST00000463005 TRIM47Q96LD4 638 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 SRRDQ9UH36 339 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 NR2E3Q9Y5X4 410 aa10.05□□□□□ -0.8
GARNL3-212ENST00000463005 MGAMO43451 1857 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 GJB1P08034 283 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 GRK4P32298 578 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 PSMC4P43686 418 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 GJA8P48165 433 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 UBXN2AP68543 259 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 MCM6Q14566 821 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 ZNF594Q96JF6 807 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-212ENST00000463005 YTHDC1Q96MU7 727 aaKnown RBP10.04□□□□□ -0.8
GARNL3-212ENST00000463005 ARHGAP39Q9C0H5 1083 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 TMOD2Q9NZR1 351 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 SNCAIPQ9Y6H5 919 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 ZSWIM8A7E2V4 1837 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 IL16Q14005 1332 aa10.04□□□□□ -0.8
GARNL3-212ENST00000463005 A0A1W2PPC1 479 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 RNF40O75150 1001 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 RFC5P40937 340 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 GYG1P46976 350 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 MTFR1Q15390 333 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 BEND3Q5T5X7 828 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 FBXO33Q7Z6M2 555 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 ANKRD23Q86SG2 305 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 VPS37DQ86XT2 251 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 WWC1Q8IX03 1113 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 SLC17A8Q8NDX2 589 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 RAET1EQ8TD07 263 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 TEKT1Q969V4 418 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 POM121Q96HA1 1249 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 WRNIP1Q96S55 665 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 SUGT1Q9Y2Z0 365 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 MROH5Q6ZUA9 1318 aa10.03□□□□□ -0.8
GARNL3-212ENST00000463005 GRM8O00222 908 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 DLL1O00548 723 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 VAMP4O75379 141 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 FMNL1O95466 1100 aaPredicted RBP10.02□□□□□ -0.81
GARNL3-212ENST00000463005 CAVIN4Q5BKX8 364 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 EPHA10Q5JZY3 1008 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 UBE2Q1Q7Z7E8 422 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 ZKSCAN4Q969J2 545 aaPredicted RBP10.02□□□□□ -0.81
GARNL3-212ENST00000463005 SHISA4Q96DD7 197 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 ZDHHC15Q96MV8 337 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 ZNF341Q9BYN7 854 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 RNF208Q9H0X6 261 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 PRO3102Q9H379 93 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 SNRKQ9NRH2 765 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 C9orf78Q9NZ63 289 aaPredicted RBP10.02□□□□□ -0.81
GARNL3-212ENST00000463005 RIPOR2Q9Y4F9 1068 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 MAST3O60307 1309 aa10.02□□□□□ -0.81
GARNL3-212ENST00000463005 PDHXO00330 501 aa10.01□□□□□ -0.81
GARNL3-212ENST00000463005 SPTLC1O15269 473 aa10.01□□□□□ -0.81
GARNL3-212ENST00000463005 FRAT2O75474 233 aaPredicted RBP10.01□□□□□ -0.81
GARNL3-212ENST00000463005 ALDH1L1O75891 902 aa10.01□□□□□ -0.81
GARNL3-212ENST00000463005 CCL5P13501 91 aa10.01□□□□□ -0.81
GARNL3-212ENST00000463005 GCGRP47871 477 aa10.01□□□□□ -0.81
GARNL3-212ENST00000463005 HHIPL2Q6UWX4 724 aa10.01□□□□□ -0.81
GARNL3-212ENST00000463005 BIN2Q9UBW5 565 aaPredicted RBP10.01□□□□□ -0.81
GARNL3-212ENST00000463005 CPA4Q9UI42 421 aa10.01□□□□□ -0.81
GARNL3-212ENST00000463005 KCNH4Q9UQ05 1017 aa10.01□□□□□ -0.81
GARNL3-212ENST00000463005 MYPNQ86TC9 1320 aa10.01□□□□□ -0.81
GARNL3-212ENST00000463005 RPAP1Q9BWH6 1393 aaPredicted RBP10.01□□□□□ -0.81
GARNL3-212ENST00000463005 ZBTB7BO15156 539 aaPredicted RBP10□□□□□ -0.81
GARNL3-212ENST00000463005 KDM4AO75164 1064 aa10□□□□□ -0.81
GARNL3-212ENST00000463005 SGPL1O95470 568 aa10□□□□□ -0.81
GARNL3-212ENST00000463005 CTGFP29279 349 aa10□□□□□ -0.81
GARNL3-212ENST00000463005 HNRNPUQ00839 825 aaKnown RBP eCLIP10□□□□□ -0.81
GARNL3-212ENST00000463005 APOBEC3HQ6NTF7 200 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms