RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.14■□□□□ 0.65
ERCC3-206ENST00000462306 SAGE1Q9NXZ1 904 aa19.14■□□□□ 0.65
ERCC3-206ENST00000462306 TSKSQ9UJT2 592 aa19.14■□□□□ 0.65
ERCC3-206ENST00000462306 TESPA1A2RU30 521 aaPredicted RBP19.13■□□□□ 0.65
ERCC3-206ENST00000462306 RNF113AO15541 343 aaKnown RBP19.13■□□□□ 0.65
ERCC3-206ENST00000462306 CTNND1O60716 968 aaKnown RBP19.13■□□□□ 0.65
ERCC3-206ENST00000462306 TRPA1O75762 1119 aa19.13■□□□□ 0.65
ERCC3-206ENST00000462306 LBX1P52954 281 aa19.13■□□□□ 0.65
ERCC3-206ENST00000462306 INHBEP58166 350 aa19.13■□□□□ 0.65
ERCC3-206ENST00000462306 FOXP4Q8IVH2 680 aaPredicted RBP19.13■□□□□ 0.65
ERCC3-206ENST00000462306 HERC5Q9UII4 1024 aaKnown RBP19.13■□□□□ 0.65
ERCC3-206ENST00000462306 IRF6O14896 467 aa19.12■□□□□ 0.65
ERCC3-206ENST00000462306 PPATQ06203 517 aa19.12■□□□□ 0.65
ERCC3-206ENST00000462306 PPIL2Q13356 520 aa19.12■□□□□ 0.65
ERCC3-206ENST00000462306 RRP1BQ14684 758 aaKnown RBP19.12■□□□□ 0.65
ERCC3-206ENST00000462306 PLEKHM2Q8IWE5 1019 aa19.12■□□□□ 0.65
ERCC3-206ENST00000462306 SCYL3Q8IZE3 742 aa19.12■□□□□ 0.65
ERCC3-206ENST00000462306 SDR42E1Q8WUS8 393 aa19.12■□□□□ 0.65
ERCC3-206ENST00000462306 DNAJC18Q9H819 358 aa19.12■□□□□ 0.65
ERCC3-206ENST00000462306 DDX60LQ5H9U9 1706 aaKnown RBP19.11■□□□□ 0.65
ERCC3-206ENST00000462306 IGF2BP3O00425 579 aaKnown RBP eCLIP19.11■□□□□ 0.65
ERCC3-206ENST00000462306 PRKAB2O43741 272 aa19.11■□□□□ 0.65
ERCC3-206ENST00000462306 ZFYP08048 801 aaPredicted RBP19.11■□□□□ 0.65
ERCC3-206ENST00000462306 SLC4A8Q2Y0W8 1093 aa19.11■□□□□ 0.65
ERCC3-206ENST00000462306 IFNL1Q8IU54 200 aa19.11■□□□□ 0.65
ERCC3-206ENST00000462306 APPBP2Q92624 585 aa19.11■□□□□ 0.65
ERCC3-206ENST00000462306 OSBP2Q969R2 916 aa19.11■□□□□ 0.65
ERCC3-206ENST00000462306 PTPN18Q99952 460 aa19.11■□□□□ 0.65
ERCC3-206ENST00000462306 DCP1AQ9NPI6 582 aaPredicted RBP19.11■□□□□ 0.65
ERCC3-206ENST00000462306 PRDM10Q9NQV6 1147 aa19.11■□□□□ 0.65
ERCC3-206ENST00000462306 MYH1P12882 1939 aa19.11■□□□□ 0.65
ERCC3-206ENST00000462306 HLA-DOAP06340 250 aa19.1■□□□□ 0.65
ERCC3-206ENST00000462306 PTPRAP18433 802 aa19.1■□□□□ 0.65
ERCC3-206ENST00000462306 GTF2A2P52657 109 aa19.1■□□□□ 0.65
ERCC3-206ENST00000462306 BRI3BPQ8WY22 251 aa19.1■□□□□ 0.65
ERCC3-206ENST00000462306 FSD1Q9BTV5 496 aa19.1■□□□□ 0.65
ERCC3-206ENST00000462306 OSBPL3Q9H4L5 887 aa19.1■□□□□ 0.65
ERCC3-206ENST00000462306 CAP2P40123 477 aa19.09■□□□□ 0.65
ERCC3-206ENST00000462306 PLCD1P51178 756 aa19.09■□□□□ 0.65
ERCC3-206ENST00000462306 LRRFIP1Q32MZ4 808 aaKnown RBP19.09■□□□□ 0.65
ERCC3-206ENST00000462306 COL13A1Q5TAT6 717 aaPredicted RBP19.09■□□□□ 0.65
ERCC3-206ENST00000462306 TTC6Q86TZ1 520 aa19.09■□□□□ 0.65
ERCC3-206ENST00000462306 CRACR2BQ8N4Y2 399 aaPredicted RBP19.09■□□□□ 0.65
ERCC3-206ENST00000462306 STRBPQ96SI9 672 aaKnown RBP19.09■□□□□ 0.65
ERCC3-206ENST00000462306 EHD4Q9H223 541 aa19.09■□□□□ 0.65
ERCC3-206ENST00000462306 PICK1Q9NRD5 415 aa19.09■□□□□ 0.65
ERCC3-206ENST00000462306 ATP8A2Q9NTI2 1148 aa19.09■□□□□ 0.65
ERCC3-206ENST00000462306 KCNH4Q9UQ05 1017 aa19.09■□□□□ 0.65
ERCC3-206ENST00000462306 DOCK1Q14185 1865 aa19.08■□□□□ 0.65
ERCC3-206ENST00000462306 NAV1Q8NEY1 1877 aa19.08■□□□□ 0.65
ERCC3-206ENST00000462306 CCL15-CCL14A0A0B4J2E2 113 aa19.08■□□□□ 0.64
ERCC3-206ENST00000462306 SNAPC2Q13487 334 aa19.08■□□□□ 0.64
ERCC3-206ENST00000462306 CCL15Q16663 113 aa19.08■□□□□ 0.64
ERCC3-206ENST00000462306 EVI5LQ96CN4 794 aa19.08■□□□□ 0.64
ERCC3-206ENST00000462306 CFHR5Q9BXR6 569 aa19.08■□□□□ 0.64
ERCC3-206ENST00000462306 MCM9Q9NXL9 1143 aa19.08■□□□□ 0.64
ERCC3-206ENST00000462306 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.08■□□□□ 0.64
ERCC3-206ENST00000462306 ZHX2Q9Y6X8 837 aa19.08■□□□□ 0.64
ERCC3-206ENST00000462306 TBC1D8O95759 1140 aa19.07■□□□□ 0.64
ERCC3-206ENST00000462306 ALDH1A1P00352 501 aa19.07■□□□□ 0.64
ERCC3-206ENST00000462306 POLR3DP05423 398 aaPredicted RBP19.07■□□□□ 0.64
ERCC3-206ENST00000462306 CETPP11597 493 aa19.07■□□□□ 0.64
ERCC3-206ENST00000462306 PDE4AP27815 886 aa19.07■□□□□ 0.64
ERCC3-206ENST00000462306 JAG1P78504 1218 aa19.07■□□□□ 0.64
ERCC3-206ENST00000462306 EVX2Q03828 476 aa19.07■□□□□ 0.64
ERCC3-206ENST00000462306 ZMYM1Q5SVZ6 1142 aa19.07■□□□□ 0.64
ERCC3-206ENST00000462306 SERPINB13Q9UIV8 391 aa19.07■□□□□ 0.64
ERCC3-206ENST00000462306 AFG3L2Q9Y4W6 797 aa19.07■□□□□ 0.64
ERCC3-206ENST00000462306 SLC4A4Q9Y6R1 1079 aa19.07■□□□□ 0.64
ERCC3-206ENST00000462306 M0R2C6 588 aa19.06■□□□□ 0.64
ERCC3-206ENST00000462306 CXCL11O14625 94 aa19.06■□□□□ 0.64
ERCC3-206ENST00000462306 CYP2D6P10635 497 aa19.06■□□□□ 0.64
ERCC3-206ENST00000462306 GABPAQ06546 454 aa19.06■□□□□ 0.64
ERCC3-206ENST00000462306 TATDN1Q6P1N9 297 aa19.06■□□□□ 0.64
ERCC3-206ENST00000462306 CCDC84Q86UT8 332 aaPredicted RBP19.06■□□□□ 0.64
ERCC3-206ENST00000462306 SEC62Q99442 399 aaKnown RBP19.06■□□□□ 0.64
ERCC3-206ENST00000462306 TRIM34Q9BYJ4 488 aa19.06■□□□□ 0.64
ERCC3-206ENST00000462306 R3HDMLQ9H3Y0 253 aa19.06■□□□□ 0.64
ERCC3-206ENST00000462306 PHIPQ8WWQ0 1821 aa19.05■□□□□ 0.64
ERCC3-206ENST00000462306 GSG1L2A8MUP6 293 aa19.05■□□□□ 0.64
ERCC3-206ENST00000462306 GPAA1O43292 621 aa19.05■□□□□ 0.64
ERCC3-206ENST00000462306 MOGSQ13724 837 aa19.05■□□□□ 0.64
ERCC3-206ENST00000462306 SHROOM1Q2M3G4 852 aaPredicted RBP19.05■□□□□ 0.64
ERCC3-206ENST00000462306 OTUD7BQ6GQQ9 843 aa19.05■□□□□ 0.64
ERCC3-206ENST00000462306 SHMT1P34896 483 aa19.04■□□□□ 0.64
ERCC3-206ENST00000462306 TICAM2Q86XR7 235 aa19.04■□□□□ 0.64
ERCC3-206ENST00000462306 FAM43AQ8N2R8 423 aa19.04■□□□□ 0.64
ERCC3-206ENST00000462306 ATAD5Q96QE3 1844 aa19.03■□□□□ 0.64
ERCC3-206ENST00000462306 CYP2D7A0A087X1C5 515 aa19.03■□□□□ 0.64
ERCC3-206ENST00000462306 BTBD19C9JJ37 291 aa19.03■□□□□ 0.64
ERCC3-206ENST00000462306 USP17L12C9JPN9 530 aa19.03■□□□□ 0.64
ERCC3-206ENST00000462306 USP17L21D6R901 530 aa19.03■□□□□ 0.64
ERCC3-206ENST00000462306 SMIM22K7EJ46 135 aa19.03■□□□□ 0.64
ERCC3-206ENST00000462306 GDF11O95390 407 aa19.03■□□□□ 0.64
ERCC3-206ENST00000462306 C12orf60Q5U649 245 aa19.03■□□□□ 0.64
ERCC3-206ENST00000462306 CTR9Q6PD62 1173 aa19.03■□□□□ 0.64
ERCC3-206ENST00000462306 GINM1Q9NU53 330 aa19.03■□□□□ 0.64
ERCC3-206ENST00000462306 BAZ2AQ9UIF9 1905 aaKnown RBP19.03■□□□□ 0.64
ERCC3-206ENST00000462306 A0A0G2JLL6 359 aaPredicted RBP19.02■□□□□ 0.64
ERCC3-206ENST00000462306 USP17L5A8MUK1 530 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms