RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 PDHXO00330 501 aa16.71■□□□□ 0.27
PCOLCE-203ENST00000462260 DYNLL1P63167 89 aaKnown RBP16.71■□□□□ 0.27
PCOLCE-203ENST00000462260 MLLT1Q03111 559 aaPredicted RBP16.71■□□□□ 0.27
PCOLCE-203ENST00000462260 GPAT2Q6NUI2 795 aa16.71■□□□□ 0.27
PCOLCE-203ENST00000462260 PRRT2Q7Z6L0 340 aaPredicted RBP16.71■□□□□ 0.27
PCOLCE-203ENST00000462260 MAGEB6Q8N7X4 407 aa16.71■□□□□ 0.27
PCOLCE-203ENST00000462260 PTPN22Q9Y2R2 807 aa16.71■□□□□ 0.27
PCOLCE-203ENST00000462260 IFIT2P09913 472 aaKnown RBP16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 SOX10P56693 466 aa16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 MAP3K12Q12852 859 aa16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 RRP1BQ14684 758 aaKnown RBP16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 C17orf99Q6UX52 265 aa16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 FASTKD5Q7L8L6 764 aaKnown RBP16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 METTL16Q86W50 562 aaKnown RBP16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 CERS3Q8IU89 383 aa16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 MAPKAPK5Q8IW41 473 aa16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 CENPFP49454 3210 aa16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 ADGRA2Q96PE1 1338 aa16.7■□□□□ 0.26
PCOLCE-203ENST00000462260 CAP2P40123 477 aa16.69■□□□□ 0.26
PCOLCE-203ENST00000462260 LACTBP83111 547 aaPredicted RBP16.69■□□□□ 0.26
PCOLCE-203ENST00000462260 ARHGEF6Q15052 776 aa16.69■□□□□ 0.26
PCOLCE-203ENST00000462260 CCDC84Q86UT8 332 aaPredicted RBP16.69■□□□□ 0.26
PCOLCE-203ENST00000462260 MIGA1Q8NAN2 632 aa16.69■□□□□ 0.26
PCOLCE-203ENST00000462260 ATAD5Q96QE3 1844 aa16.68■□□□□ 0.26
PCOLCE-203ENST00000462260 TRIM75PA6NK02 468 aa16.68■□□□□ 0.26
PCOLCE-203ENST00000462260 FOXP4Q8IVH2 680 aaPredicted RBP16.68■□□□□ 0.26
PCOLCE-203ENST00000462260 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
PCOLCE-203ENST00000462260 PARK7Q99497 189 aaKnown RBP16.67■□□□□ 0.26
PCOLCE-203ENST00000462260 DNAJC2Q99543 621 aaKnown RBP16.67■□□□□ 0.26
PCOLCE-203ENST00000462260 RIOK1Q9BRS2 568 aaKnown RBP16.67■□□□□ 0.26
PCOLCE-203ENST00000462260 TBC1D2Q9BYX2 928 aa16.67■□□□□ 0.26
PCOLCE-203ENST00000462260 ARHGAP39Q9C0H5 1083 aa16.67■□□□□ 0.26
PCOLCE-203ENST00000462260 CPA4Q9UI42 421 aa16.67■□□□□ 0.26
PCOLCE-203ENST00000462260 PALD1Q9ULE6 856 aa16.67■□□□□ 0.26
PCOLCE-203ENST00000462260 SLC45A1Q9Y2W3 748 aa16.67■□□□□ 0.26
PCOLCE-203ENST00000462260 ZSWIM8A7E2V4 1837 aa16.66■□□□□ 0.26
PCOLCE-203ENST00000462260 GOLIM4O00461 696 aa16.66■□□□□ 0.26
PCOLCE-203ENST00000462260 PDE6AP16499 860 aa16.66■□□□□ 0.26
PCOLCE-203ENST00000462260 ATP5JP18859 108 aa16.66■□□□□ 0.26
PCOLCE-203ENST00000462260 KIF22Q14807 665 aa16.66■□□□□ 0.26
PCOLCE-203ENST00000462260 GADL1Q6ZQY3 521 aa16.66■□□□□ 0.26
PCOLCE-203ENST00000462260 LRRCC1Q9C099 1032 aa16.66■□□□□ 0.26
PCOLCE-203ENST00000462260 BCL11AQ9H165 835 aa16.66■□□□□ 0.26
PCOLCE-203ENST00000462260 SAP30BPQ9UHR5 308 aaKnown RBP16.66■□□□□ 0.26
PCOLCE-203ENST00000462260 MYH1P12882 1939 aa16.66■□□□□ 0.26
PCOLCE-203ENST00000462260 USP17L5A8MUK1 530 aa16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 GNRH1P01148 92 aa16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 HLA-DOAP06340 250 aa16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 CYP2C8P10632 490 aa16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 BCRP11274 1271 aa16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 USP5P45974 858 aa16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 SLC9C2Q5TAH2 1124 aa16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 CRACR2BQ8N4Y2 399 aaPredicted RBP16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 ZNF280CQ8ND82 737 aa16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 ARMC5Q96C12 935 aa16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 AGTPBP1Q9UPW5 1226 aa16.65■□□□□ 0.26
PCOLCE-203ENST00000462260 TCRBV5S4A2TA0A5A2 114 aa16.64■□□□□ 0.25
PCOLCE-203ENST00000462260 ASNSP08243 561 aa16.64■□□□□ 0.25
PCOLCE-203ENST00000462260 CTGFP29279 349 aa16.64■□□□□ 0.25
PCOLCE-203ENST00000462260 SPP2Q13103 211 aa16.64■□□□□ 0.25
PCOLCE-203ENST00000462260 PROCA1Q8NCQ7 364 aaPredicted RBP16.64■□□□□ 0.25
PCOLCE-203ENST00000462260 HAUS7Q99871 368 aa16.64■□□□□ 0.25
PCOLCE-203ENST00000462260 DCTPP1Q9H773 170 aa16.64■□□□□ 0.25
PCOLCE-203ENST00000462260 GINM1Q9NU53 330 aa16.64■□□□□ 0.25
PCOLCE-203ENST00000462260 PAG1Q9NWQ8 432 aa16.64■□□□□ 0.25
PCOLCE-203ENST00000462260 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
PCOLCE-203ENST00000462260 ZNF532Q9HCE3 1301 aa16.64■□□□□ 0.25
PCOLCE-203ENST00000462260 MAGEB6P1A0A0J9YX57 407 aa16.63■□□□□ 0.25
PCOLCE-203ENST00000462260 SMARCA5O60264 1052 aaPredicted RBP16.63■□□□□ 0.25
PCOLCE-203ENST00000462260 JAG1P78504 1218 aa16.63■□□□□ 0.25
PCOLCE-203ENST00000462260 SH3D19Q5HYK7 790 aa16.63■□□□□ 0.25
PCOLCE-203ENST00000462260 TRIM47Q96LD4 638 aa16.63■□□□□ 0.25
PCOLCE-203ENST00000462260 WDR18Q9BV38 432 aa16.63■□□□□ 0.25
PCOLCE-203ENST00000462260 AS3MTQ9HBK9 375 aa16.63■□□□□ 0.25
PCOLCE-203ENST00000462260 LOC285556D6RIA3 1793 aa16.63■□□□□ 0.25
PCOLCE-203ENST00000462260 BRCA2P51587 3418 aa16.63■□□□□ 0.25
PCOLCE-203ENST00000462260 TNRC18O15417 2968 aaPredicted RBP16.62■□□□□ 0.25
PCOLCE-203ENST00000462260 DDX60LQ5H9U9 1706 aaKnown RBP16.62■□□□□ 0.25
PCOLCE-203ENST00000462260 PSMC4P43686 418 aa16.62■□□□□ 0.25
PCOLCE-203ENST00000462260 PRMT2P55345 433 aa16.62■□□□□ 0.25
PCOLCE-203ENST00000462260 RRP1P56182 461 aaKnown RBP16.62■□□□□ 0.25
PCOLCE-203ENST00000462260 SHROOM1Q2M3G4 852 aaPredicted RBP16.62■□□□□ 0.25
PCOLCE-203ENST00000462260 SLC4A8Q2Y0W8 1093 aa16.62■□□□□ 0.25
PCOLCE-203ENST00000462260 TREML2Q5T2D2 321 aa16.62■□□□□ 0.25
PCOLCE-203ENST00000462260 TRIM34Q9BYJ4 488 aa16.62■□□□□ 0.25
PCOLCE-203ENST00000462260 EHD4Q9H223 541 aa16.62■□□□□ 0.25
PCOLCE-203ENST00000462260 SERPINB13Q9UIV8 391 aa16.62■□□□□ 0.25
PCOLCE-203ENST00000462260 KIAA0100Q14667 2235 aaKnown RBP16.61■□□□□ 0.25
PCOLCE-203ENST00000462260 GDF11O95390 407 aa16.61■□□□□ 0.25
PCOLCE-203ENST00000462260 HMGCS2P54868 508 aa16.61■□□□□ 0.25
PCOLCE-203ENST00000462260 TATDN1Q6P1N9 297 aa16.61■□□□□ 0.25
PCOLCE-203ENST00000462260 TTC6Q86TZ1 520 aa16.61■□□□□ 0.25
PCOLCE-203ENST00000462260 ZNF333Q96JL9 665 aa16.61■□□□□ 0.25
PCOLCE-203ENST00000462260 CRNKL1Q9BZJ0 848 aaKnown RBP16.61■□□□□ 0.25
PCOLCE-203ENST00000462260 ZBTB21Q9ULJ3 1066 aa16.61■□□□□ 0.25
PCOLCE-203ENST00000462260 PCDHB15Q9Y5E8 787 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms