RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 MTMR14Q8NCE2 650 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 MAFAQ8NHW3 353 aaPredicted RBP7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 DEFB118Q96PH6 123 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 CDX2Q99626 313 aaPredicted RBP7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 MBIPQ9NS73 344 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 PPP2R3BQ9Y5P8 575 aa7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 V9GY48 417 aaPredicted RBP7.55□□□□□ -1.2
SMARCC1-204ENST00000462198 SSC5DA1L4H1 1573 aa7.54□□□□□ -1.2
SMARCC1-204ENST00000462198 IL16Q14005 1332 aa7.54□□□□□ -1.2
SMARCC1-204ENST00000462198 MYPNQ86TC9 1320 aa7.54□□□□□ -1.2
SMARCC1-204ENST00000462198 OATP04181 439 aa7.54□□□□□ -1.2
SMARCC1-204ENST00000462198 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.54□□□□□ -1.2
SMARCC1-204ENST00000462198 PXYLP1Q8TE99 480 aa7.54□□□□□ -1.2
SMARCC1-204ENST00000462198 XAGE3Q8WTP9 111 aa7.54□□□□□ -1.2
SMARCC1-204ENST00000462198 TBC1D2Q9BYX2 928 aa7.54□□□□□ -1.2
SMARCC1-204ENST00000462198 CPA4Q9UI42 421 aa7.54□□□□□ -1.2
SMARCC1-204ENST00000462198 NCOR1O75376 2440 aa7.54□□□□□ -1.2
SMARCC1-204ENST00000462198 COL1A1P02452 1464 aaPredicted RBP7.54□□□□□ -1.2
SMARCC1-204ENST00000462198 XDHP47989 1333 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 EYSQ5T1H1 3165 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 CLRN2A0PK11 232 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 BTBD19C9JJ37 291 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 ATP5J2-PTCD1G3V325 749 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 IRS4O14654 1257 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 ZNF853P0CG23 659 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 CETPP11597 493 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 MFAP1P55081 439 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 DIXDC1Q155Q3 683 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 TSR1Q2NL82 804 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 TUSC1Q2TAM9 212 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 DIS3LQ8TF46 1054 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 TSR2Q969E8 191 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 GZF1Q9H116 711 aaPredicted RBP7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 MYH16Q9H6N6 1097 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 ZCCHC17Q9NP64 241 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 MTMR7Q9Y216 660 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 PCDHAC2Q9Y5I4 1007 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 ADGRG1Q9Y653 693 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 BDP1A6H8Y1 2624 aa7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 LAMA2P24043 3122 aaKnown RBP7.53□□□□□ -1.2
SMARCC1-204ENST00000462198 ZNF804BA4D1E1 1349 aa7.52□□□□□ -1.2
SMARCC1-204ENST00000462198 ZNF521Q96K83 1311 aa7.52□□□□□ -1.2
SMARCC1-204ENST00000462198 MYO1BO43795 1136 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 ADCY3O60266 1144 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 PRKCZQ05513 592 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 RASA3Q14644 834 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 TJAP1Q5JTD0 557 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 ZNF697Q5TEC3 545 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 NLRP7Q8WX94 980 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 PRMT6Q96LA8 375 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 ISCA1Q9BUE6 129 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 COA1Q9GZY4 146 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 SEMA6BQ9H3T3 888 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 VEZTQ9HBM0 779 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 GDPD2Q9HCC8 539 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 LIMD1Q9UGP4 676 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 GABRQQ9UN88 632 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 PCDHGA10Q9Y5H3 936 aa7.52□□□□□ -1.21
SMARCC1-204ENST00000462198 E9PSI1 815 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 ELL2O00472 640 aaPredicted RBP7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 GTF2IP78347 998 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 VGLL4Q14135 290 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 KRT24Q2M2I5 525 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 TAF7LQ5H9L4 462 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 DUSP27Q5VZP5 1158 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 TXNRD3Q86VQ6 643 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 TTC13Q8NBP0 860 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 MYLIPQ8WY64 445 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 TSR3Q9UJK0 312 aaKnown RBP7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 MGAMO43451 1857 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 ZBED9Q6R2W3 1325 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 FAM205AQ6ZU69 1335 aa7.51□□□□□ -1.21
SMARCC1-204ENST00000462198 ECM29Q5VYK3 1845 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 OTOFQ9HC10 1997 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 MUC3AQ02505 3323 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 INHAP05111 366 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 ELNP15502 786 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 FCGRTP55899 365 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 EXOSC9Q06265 439 aaKnown RBP7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 SLFN5Q08AF3 891 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 SNAPC2Q13487 334 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 CFAP100Q494V2 611 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 TYW1BQ6NUM6 668 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 ANKRD18AQ8IVF6 992 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 C8orf58Q8NAV2 365 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 CDCA7LQ96GN5 454 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 CALR3Q96L12 384 aaKnown RBP7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 CCDC85AQ96PX6 553 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 PAK6Q9NQU5 681 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 CSADQ9Y600 493 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 DOCK3Q8IZD9 2030 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 SYNGAP1Q96PV0 1343 aa7.5□□□□□ -1.21
SMARCC1-204ENST00000462198 PIEZO1Q92508 2521 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 MED23Q9ULK4 1368 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 F8W031 263 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 HOXB7P09629 217 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 FLT3LGP49771 235 aa7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 CCT4P50991 539 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 TWISTNBQ3B726 338 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-204ENST00000462198 CCDC152Q4G0S7 254 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms