RNA–Protein interactions for RNA: ENST00000461944.1

NGEF-208, Transcript of neuronal guanine nucleotide exchange factor, humanhuman

TSL 4

Gene NGEF, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGEF-208ENST00000461944 HIRAP54198 1017 aaPredicted RBP21.78■■□□□ 1.08
NGEF-208ENST00000461944 TSGA10IPQ3SY00 556 aa21.78■■□□□ 1.08
NGEF-208ENST00000461944 BLOC1S2Q6QNY1 142 aa21.78■■□□□ 1.08
NGEF-208ENST00000461944 NCOA7Q8NI08 942 aa21.78■■□□□ 1.08
NGEF-208ENST00000461944 ZNF526Q8TF50 670 aaPredicted RBP21.78■■□□□ 1.08
NGEF-208ENST00000461944 CSRNP1Q96S65 589 aa21.78■■□□□ 1.08
NGEF-208ENST00000461944 UPF3BQ9BZI7 483 aaKnown RBP21.78■■□□□ 1.08
NGEF-208ENST00000461944 TMEM39BQ9GZU3 492 aa21.78■■□□□ 1.08
NGEF-208ENST00000461944 TAF1DQ9H5J8 278 aaPredicted RBP21.78■■□□□ 1.08
NGEF-208ENST00000461944 SCAF8Q9UPN6 1271 aaKnown RBP21.78■■□□□ 1.08
NGEF-208ENST00000461944 PITPNM2Q9BZ72 1349 aa21.78■■□□□ 1.08
NGEF-208ENST00000461944 DDTLA6NHG4 134 aaPredicted RBP21.77■■□□□ 1.08
NGEF-208ENST00000461944 SMIM22K7EJ46 135 aa21.77■■□□□ 1.08
NGEF-208ENST00000461944 PCP11498 1178 aaKnown RBP21.77■■□□□ 1.08
NGEF-208ENST00000461944 ANP32AP39687 249 aaKnown RBP21.77■■□□□ 1.08
NGEF-208ENST00000461944 RASA3Q14644 834 aa21.77■■□□□ 1.08
NGEF-208ENST00000461944 IL17RAQ96F46 866 aa21.77■■□□□ 1.08
NGEF-208ENST00000461944 DYNLL2Q96FJ2 89 aa21.77■■□□□ 1.08
NGEF-208ENST00000461944 KIF2CQ99661 725 aa21.77■■□□□ 1.08
NGEF-208ENST00000461944 KRT23Q9C075 422 aa21.77■■□□□ 1.08
NGEF-208ENST00000461944 ZNF287Q9HBT7 754 aa21.77■■□□□ 1.08
NGEF-208ENST00000461944 SERPINB13Q9UIV8 391 aa21.77■■□□□ 1.08
NGEF-208ENST00000461944 CYP46A1Q9Y6A2 500 aa21.77■■□□□ 1.08
NGEF-208ENST00000461944 HMGB1P09429 215 aaKnown RBP21.76■■□□□ 1.07
NGEF-208ENST00000461944 SH3BP5LQ7L8J4 393 aa21.76■■□□□ 1.07
NGEF-208ENST00000461944 PNMA8AQ86V59 439 aaPredicted RBP21.76■■□□□ 1.07
NGEF-208ENST00000461944 DCPSQ96C86 337 aaKnown RBP21.76■■□□□ 1.07
NGEF-208ENST00000461944 TM6SF1Q9BZW5 370 aa21.76■■□□□ 1.07
NGEF-208ENST00000461944 EHD4Q9H223 541 aa21.76■■□□□ 1.07
NGEF-208ENST00000461944 MKNK2Q9HBH9 465 aa21.76■■□□□ 1.07
NGEF-208ENST00000461944 PI4KBQ9UBF8 816 aa21.76■■□□□ 1.07
NGEF-208ENST00000461944 B4E1Z4 1266 aa21.75■■□□□ 1.07
NGEF-208ENST00000461944 PRDM1O75626 825 aa21.75■■□□□ 1.07
NGEF-208ENST00000461944 C16orf86Q6ZW13 317 aa21.75■■□□□ 1.07
NGEF-208ENST00000461944 SLC44A5Q8NCS7 719 aa21.75■■□□□ 1.07
NGEF-208ENST00000461944 ST18O60284 1047 aa21.74■■□□□ 1.07
NGEF-208ENST00000461944 CPA1P15085 419 aa21.74■■□□□ 1.07
NGEF-208ENST00000461944 RUFY3Q7L099 469 aa21.74■■□□□ 1.07
NGEF-208ENST00000461944 SULF1Q8IWU6 871 aa21.74■■□□□ 1.07
NGEF-208ENST00000461944 ESR2Q92731 530 aa21.74■■□□□ 1.07
NGEF-208ENST00000461944 DEFB129Q9H1M3 183 aa21.74■■□□□ 1.07
NGEF-208ENST00000461944 SWAP70Q9UH65 585 aa21.74■■□□□ 1.07
NGEF-208ENST00000461944 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.74■■□□□ 1.07
NGEF-208ENST00000461944 RBM19Q9Y4C8 960 aaKnown RBP21.74■■□□□ 1.07
NGEF-208ENST00000461944 PPP2R3BQ9Y5P8 575 aa21.74■■□□□ 1.07
NGEF-208ENST00000461944 ATAD5Q96QE3 1844 aa21.73■■□□□ 1.07
NGEF-208ENST00000461944 ORC4O43929 436 aa21.73■■□□□ 1.07
NGEF-208ENST00000461944 RANBP6O60518 1105 aaKnown RBP21.73■■□□□ 1.07
NGEF-208ENST00000461944 KDM4AO75164 1064 aa21.73■■□□□ 1.07
NGEF-208ENST00000461944 VEGFAP15692 232 aaPredicted RBP21.73■■□□□ 1.07
NGEF-208ENST00000461944 RPS6KB1P23443 525 aa21.73■■□□□ 1.07
NGEF-208ENST00000461944 NEK4P51957 841 aa21.73■■□□□ 1.07
NGEF-208ENST00000461944 FGD1P98174 961 aa21.73■■□□□ 1.07
NGEF-208ENST00000461944 MB21D2Q8IYB1 491 aaPredicted RBP21.73■■□□□ 1.07
NGEF-208ENST00000461944 RRAGCQ9HB90 399 aa21.73■■□□□ 1.07
NGEF-208ENST00000461944 ZSWIM6Q9HCJ5 1215 aa21.73■■□□□ 1.07
NGEF-208ENST00000461944 INCENPQ9NQS7 918 aa21.73■■□□□ 1.07
NGEF-208ENST00000461944 CLEC11AQ9Y240 323 aa21.73■■□□□ 1.07
NGEF-208ENST00000461944 POLR2AP24928 1970 aaKnown RBP21.73■■□□□ 1.07
NGEF-208ENST00000461944 FAM196BA6NMK8 535 aa21.72■■□□□ 1.07
NGEF-208ENST00000461944 POTECB2RU33 542 aa21.72■■□□□ 1.07
NGEF-208ENST00000461944 MCM5P33992 734 aa21.72■■□□□ 1.07
NGEF-208ENST00000461944 CDK8P49336 464 aa21.72■■□□□ 1.07
NGEF-208ENST00000461944 CDAN1Q8IWY9 1227 aa21.72■■□□□ 1.07
NGEF-208ENST00000461944 ZC3H15Q8WU90 426 aaKnown RBP21.72■■□□□ 1.07
NGEF-208ENST00000461944 TACC3Q9Y6A5 838 aa21.72■■□□□ 1.07
NGEF-208ENST00000461944 CEP350Q5VT06 3117 aa21.71■■□□□ 1.07
NGEF-208ENST00000461944 TSPY2A6NKD2 308 aa21.71■■□□□ 1.07
NGEF-208ENST00000461944 PRC1O43663 620 aa21.71■■□□□ 1.07
NGEF-208ENST00000461944 TCEANC2Q96MN5 208 aa21.71■■□□□ 1.07
NGEF-208ENST00000461944 PDRG1Q9NUG6 133 aa21.71■■□□□ 1.07
NGEF-208ENST00000461944 HERC5Q9UII4 1024 aaKnown RBP21.71■■□□□ 1.07
NGEF-208ENST00000461944 ADM5C9JUS6 153 aa21.7■■□□□ 1.06
NGEF-208ENST00000461944 FGRP09769 529 aa21.7■■□□□ 1.06
NGEF-208ENST00000461944 NT5C2P49902 561 aa21.7■■□□□ 1.06
NGEF-208ENST00000461944 GABPAQ06546 454 aa21.7■■□□□ 1.06
NGEF-208ENST00000461944 DHX32Q7L7V1 743 aaKnown RBP21.7■■□□□ 1.06
NGEF-208ENST00000461944 CHST3Q7LGC8 479 aa21.7■■□□□ 1.06
NGEF-208ENST00000461944 KRT26Q7Z3Y9 468 aa21.7■■□□□ 1.06
NGEF-208ENST00000461944 ZNF444Q8N0Y2 327 aaPredicted RBP21.7■■□□□ 1.06
NGEF-208ENST00000461944 HOOK2Q96ED9 719 aa21.7■■□□□ 1.06
NGEF-208ENST00000461944 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.7■■□□□ 1.067e-7■■■■■ 36.7
NGEF-208ENST00000461944 NMRK2Q9NPI5 230 aa21.7■■□□□ 1.06
NGEF-208ENST00000461944 TAOK2Q9UL54 1235 aa21.7■■□□□ 1.06
NGEF-208ENST00000461944 GREB1LQ9C091 1923 aaPredicted RBP21.69■■□□□ 1.06
NGEF-208ENST00000461944 TSPY3P0CV98 308 aa21.69■■□□□ 1.06
NGEF-208ENST00000461944 TSPY8P0CW00 308 aa21.69■■□□□ 1.06
NGEF-208ENST00000461944 SHMT1P34896 483 aa21.69■■□□□ 1.06
NGEF-208ENST00000461944 SART3Q15020 963 aaKnown RBP21.69■■□□□ 1.06
NGEF-208ENST00000461944 FOXP4Q8IVH2 680 aaPredicted RBP21.69■■□□□ 1.06
NGEF-208ENST00000461944 UBAC1Q9BSL1 405 aa21.69■■□□□ 1.06
NGEF-208ENST00000461944 LRRC2Q9BYS8 371 aa21.69■■□□□ 1.06
NGEF-208ENST00000461944 DNAJC18Q9H819 358 aa21.69■■□□□ 1.06
NGEF-208ENST00000461944 WDR19Q8NEZ3 1342 aa21.69■■□□□ 1.06
NGEF-208ENST00000461944 DOCK1Q14185 1865 aa21.69■■□□□ 1.06
NGEF-208ENST00000461944 RASA1P20936 1047 aa21.68■■□□□ 1.06
NGEF-208ENST00000461944 COL9A3Q14050 684 aaPredicted RBP21.68■■□□□ 1.06
NGEF-208ENST00000461944 FAM47AQ5JRC9 791 aa21.68■■□□□ 1.06
NGEF-208ENST00000461944 NOL8Q76FK4 1167 aaKnown RBP21.68■■□□□ 1.06
NGEF-208ENST00000461944 CYB5R4Q7L1T6 521 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms