RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 CENPQQ7L2Z9 268 aaPredicted RBP16.79■□□□□ 0.28
RBM39-222ENST00000461849 FASTKD5Q7L8L6 764 aaKnown RBP16.79■□□□□ 0.28
RBM39-222ENST00000461849 TRIM34Q9BYJ4 488 aa16.79■□□□□ 0.28
RBM39-222ENST00000461849 DHX36Q9H2U1 1008 aaKnown RBP16.79■□□□□ 0.28
RBM39-222ENST00000461849 IFIT2P09913 472 aaKnown RBP16.78■□□□□ 0.28
RBM39-222ENST00000461849 SLURP2P0DP57 97 aa16.78■□□□□ 0.28
RBM39-222ENST00000461849 CYP7A1P22680 504 aa16.78■□□□□ 0.28
RBM39-222ENST00000461849 PPP4CP60510 307 aa16.78■□□□□ 0.28
RBM39-222ENST00000461849 MAP3K12Q12852 859 aa16.78■□□□□ 0.28
RBM39-222ENST00000461849 TGFBRAP1Q8WUH2 860 aa16.78■□□□□ 0.28
RBM39-222ENST00000461849 PARK7Q99497 189 aaKnown RBP16.78■□□□□ 0.28
RBM39-222ENST00000461849 LRRCC1Q9C099 1032 aa16.78■□□□□ 0.28
RBM39-222ENST00000461849 PIH1D3Q9NQM4 214 aaKnown RBP16.78■□□□□ 0.28
RBM39-222ENST00000461849 PI4KBQ9UBF8 816 aa16.78■□□□□ 0.28
RBM39-222ENST00000461849 HERC5Q9UII4 1024 aaKnown RBP16.78■□□□□ 0.28
RBM39-222ENST00000461849 COL2A1P02458 1487 aaPredicted RBP16.78■□□□□ 0.28
RBM39-222ENST00000461849 CENPFP49454 3210 aa16.77■□□□□ 0.28
RBM39-222ENST00000461849 FAM196BA6NMK8 535 aa16.77■□□□□ 0.28
RBM39-222ENST00000461849 TTF1Q15361 905 aaPredicted RBP16.77■□□□□ 0.28
RBM39-222ENST00000461849 GADL1Q6ZQY3 521 aa16.77■□□□□ 0.28
RBM39-222ENST00000461849 ADGRA1Q86SQ6 560 aa16.77■□□□□ 0.28
RBM39-222ENST00000461849 CERS3Q8IU89 383 aa16.77■□□□□ 0.28
RBM39-222ENST00000461849 MAPKAPK5Q8IW41 473 aa16.77■□□□□ 0.28
RBM39-222ENST00000461849 MAGEB6Q8N7X4 407 aa16.77■□□□□ 0.28
RBM39-222ENST00000461849 AFG3L2Q9Y4W6 797 aa16.77■□□□□ 0.28
RBM39-222ENST00000461849 A0A0G2JLL6 359 aaPredicted RBP16.76■□□□□ 0.27
RBM39-222ENST00000461849 TRIM75PA6NK02 468 aa16.76■□□□□ 0.27
RBM39-222ENST00000461849 LACTBP83111 547 aaPredicted RBP16.76■□□□□ 0.27
RBM39-222ENST00000461849 TMED8Q6PL24 325 aaPredicted RBP16.76■□□□□ 0.27
RBM39-222ENST00000461849 PRRT2Q7Z6L0 340 aaPredicted RBP16.76■□□□□ 0.27
RBM39-222ENST00000461849 NBPF11Q86T75 865 aa16.76■□□□□ 0.27
RBM39-222ENST00000461849 CRACR2BQ8N4Y2 399 aaPredicted RBP16.76■□□□□ 0.27
RBM39-222ENST00000461849 CPA4Q9UI42 421 aa16.76■□□□□ 0.27
RBM39-222ENST00000461849 NDUFB9Q9Y6M9 179 aa16.76■□□□□ 0.27
RBM39-222ENST00000461849 DOCK1Q14185 1865 aa16.76■□□□□ 0.27
RBM39-222ENST00000461849 FLT1P17948 1338 aa16.75■□□□□ 0.27
RBM39-222ENST00000461849 GNRH1P01148 92 aa16.75■□□□□ 0.27
RBM39-222ENST00000461849 HLA-DOAP06340 250 aa16.75■□□□□ 0.27
RBM39-222ENST00000461849 USP5P45974 858 aa16.75■□□□□ 0.27
RBM39-222ENST00000461849 C17orf99Q6UX52 265 aa16.75■□□□□ 0.27
RBM39-222ENST00000461849 MIGA1Q8NAN2 632 aa16.75■□□□□ 0.27
RBM39-222ENST00000461849 TBC1D2Q9BYX2 928 aa16.75■□□□□ 0.27
RBM39-222ENST00000461849 HTTP42858 3142 aa16.75■□□□□ 0.27
RBM39-222ENST00000461849 ECM2O94769 699 aaPredicted RBP16.74■□□□□ 0.27
RBM39-222ENST00000461849 CAP2P40123 477 aa16.74■□□□□ 0.27
RBM39-222ENST00000461849 DYNLL1P63167 89 aaKnown RBP16.74■□□□□ 0.27
RBM39-222ENST00000461849 NUCB1Q02818 461 aa16.74■□□□□ 0.27
RBM39-222ENST00000461849 MOGSQ13724 837 aa16.74■□□□□ 0.27
RBM39-222ENST00000461849 SLC9C1Q4G0N8 1177 aa16.74■□□□□ 0.27
RBM39-222ENST00000461849 GPAT2Q6NUI2 795 aa16.74■□□□□ 0.27
RBM39-222ENST00000461849 FOXP4Q8IVH2 680 aaPredicted RBP16.74■□□□□ 0.27
RBM39-222ENST00000461849 ANTXR1Q9H6X2 564 aa16.74■□□□□ 0.27
RBM39-222ENST00000461849 AS3MTQ9HBK9 375 aa16.74■□□□□ 0.27
RBM39-222ENST00000461849 MYO5AQ9Y4I1 1855 aaKnown RBP16.73■□□□□ 0.27
RBM39-222ENST00000461849 FMNL1O95466 1100 aaPredicted RBP16.73■□□□□ 0.27
RBM39-222ENST00000461849 CYP2C8P10632 490 aa16.73■□□□□ 0.27
RBM39-222ENST00000461849 HOXD10P28358 340 aa16.73■□□□□ 0.27
RBM39-222ENST00000461849 CAP1Q01518 475 aa16.73■□□□□ 0.27
RBM39-222ENST00000461849 ANKRD45Q5TZF3 282 aa16.73■□□□□ 0.27
RBM39-222ENST00000461849 B4GALNT3Q6L9W6 998 aa16.73■□□□□ 0.27
RBM39-222ENST00000461849 CCDC84Q86UT8 332 aaPredicted RBP16.73■□□□□ 0.27
RBM39-222ENST00000461849 SMCR8Q8TEV9 937 aaPredicted RBP16.73■□□□□ 0.27
RBM39-222ENST00000461849 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.73■□□□□ 0.27
RBM39-222ENST00000461849 DNAJC2Q99543 621 aaKnown RBP16.73■□□□□ 0.27
RBM39-222ENST00000461849 ARHGAP39Q9C0H5 1083 aa16.73■□□□□ 0.27
RBM39-222ENST00000461849 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.73■□□□□ 0.27
RBM39-222ENST00000461849 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
RBM39-222ENST00000461849 PALD1Q9ULE6 856 aa16.73■□□□□ 0.27
RBM39-222ENST00000461849 SLC45A1Q9Y2W3 748 aa16.73■□□□□ 0.27
RBM39-222ENST00000461849 USP17L5A8MUK1 530 aa16.72■□□□□ 0.27
RBM39-222ENST00000461849 PSMC4P43686 418 aa16.72■□□□□ 0.27
RBM39-222ENST00000461849 PRMT2P55345 433 aa16.72■□□□□ 0.27
RBM39-222ENST00000461849 SPP2Q13103 211 aa16.72■□□□□ 0.27
RBM39-222ENST00000461849 CHD1LQ86WJ1 897 aa16.72■□□□□ 0.27
RBM39-222ENST00000461849 ZNF280CQ8ND82 737 aa16.72■□□□□ 0.27
RBM39-222ENST00000461849 TMEM106CQ9BVX2 250 aa16.72■□□□□ 0.27
RBM39-222ENST00000461849 SAP30BPQ9UHR5 308 aaKnown RBP16.72■□□□□ 0.27
RBM39-222ENST00000461849 PNMA3Q9UL41 463 aa16.72■□□□□ 0.27
RBM39-222ENST00000461849 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
RBM39-222ENST00000461849 PTCH2Q9Y6C5 1203 aa16.72■□□□□ 0.27
RBM39-222ENST00000461849 ASNSP08243 561 aa16.71■□□□□ 0.27
RBM39-222ENST00000461849 SLC4A8Q2Y0W8 1093 aa16.71■□□□□ 0.27
RBM39-222ENST00000461849 SLC9C2Q5TAH2 1124 aa16.71■□□□□ 0.27
RBM39-222ENST00000461849 PROCA1Q8NCQ7 364 aaPredicted RBP16.71■□□□□ 0.27
RBM39-222ENST00000461849 ARMC5Q96C12 935 aa16.71■□□□□ 0.27
RBM39-222ENST00000461849 AGTPBP1Q9UPW5 1226 aa16.71■□□□□ 0.27
RBM39-222ENST00000461849 MAGEB6P1A0A0J9YX57 407 aa16.7■□□□□ 0.26
RBM39-222ENST00000461849 GOLIM4O00461 696 aa16.7■□□□□ 0.26
RBM39-222ENST00000461849 FCGRTP55899 365 aa16.7■□□□□ 0.26
RBM39-222ENST00000461849 PABPC4Q13310 644 aaKnown RBP eCLIP16.7■□□□□ 0.26
RBM39-222ENST00000461849 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
RBM39-222ENST00000461849 TNRC18O15417 2968 aaPredicted RBP16.7■□□□□ 0.26
RBM39-222ENST00000461849 ADGRA2Q96PE1 1338 aa16.7■□□□□ 0.26
RBM39-222ENST00000461849 BRCA2P51587 3418 aa16.69■□□□□ 0.26
RBM39-222ENST00000461849 PHIPQ8WWQ0 1821 aa16.69■□□□□ 0.26
RBM39-222ENST00000461849 ATAD5Q96QE3 1844 aa16.69■□□□□ 0.26
RBM39-222ENST00000461849 SMARCA5O60264 1052 aaPredicted RBP16.69■□□□□ 0.26
RBM39-222ENST00000461849 HMGCS2P54868 508 aa16.69■□□□□ 0.26
RBM39-222ENST00000461849 TTC6Q86TZ1 520 aa16.69■□□□□ 0.26
RBM39-222ENST00000461849 RAET1EQ8TD07 263 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms