RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 CCL15Q16663 113 aa12.25□□□□□ -0.45
SYN3-206ENST00000461446 TTC22Q5TAA0 569 aa12.25□□□□□ -0.45
SYN3-206ENST00000461446 SKAP1Q86WV1 359 aa12.25□□□□□ -0.45
SYN3-206ENST00000461446 TICAM2Q86XR7 235 aa12.25□□□□□ -0.45
SYN3-206ENST00000461446 TEX11Q8IYF3 940 aa12.25□□□□□ -0.45
SYN3-206ENST00000461446 CFHR5Q9BXR6 569 aa12.25□□□□□ -0.45
SYN3-206ENST00000461446 ZNF532Q9HCE3 1301 aa12.25□□□□□ -0.45
SYN3-206ENST00000461446 CCDC85CA6NKD9 419 aa12.24□□□□□ -0.45
SYN3-206ENST00000461446 FAM196BA6NMK8 535 aa12.24□□□□□ -0.45
SYN3-206ENST00000461446 TRIM6-TRIM34B2RNG4 842 aa12.24□□□□□ -0.45
SYN3-206ENST00000461446 BAG3O95817 575 aa12.24□□□□□ -0.45
SYN3-206ENST00000461446 CHGBP05060 677 aa12.24□□□□□ -0.45
SYN3-206ENST00000461446 ZFYP08048 801 aaPredicted RBP12.24□□□□□ -0.45
SYN3-206ENST00000461446 GSPT1P15170 499 aaKnown RBP12.24□□□□□ -0.45
SYN3-206ENST00000461446 LRRFIP1Q32MZ4 808 aaKnown RBP12.24□□□□□ -0.45
SYN3-206ENST00000461446 SLFNL1Q499Z3 407 aa12.24□□□□□ -0.45
SYN3-206ENST00000461446 FAM43AQ8N2R8 423 aa12.24□□□□□ -0.45
SYN3-206ENST00000461446 RILPL2Q969X0 211 aa12.24□□□□□ -0.45
SYN3-206ENST00000461446 NOL10Q9BSC4 688 aaKnown RBP12.24□□□□□ -0.45
SYN3-206ENST00000461446 FSD1Q9BTV5 496 aa12.24□□□□□ -0.45
SYN3-206ENST00000461446 MAST2Q6P0Q8 1798 aa12.23□□□□□ -0.45
SYN3-206ENST00000461446 RNF113AO15541 343 aaKnown RBP12.23□□□□□ -0.45
SYN3-206ENST00000461446 FKTNO75072 461 aa12.23□□□□□ -0.45
SYN3-206ENST00000461446 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
SYN3-206ENST00000461446 PLCG2P16885 1265 aa12.23□□□□□ -0.45
SYN3-206ENST00000461446 DYNLL1P63167 89 aaKnown RBP12.23□□□□□ -0.45
SYN3-206ENST00000461446 MAP3K10Q02779 954 aa12.23□□□□□ -0.45
SYN3-206ENST00000461446 PPATQ06203 517 aa12.23□□□□□ -0.45
SYN3-206ENST00000461446 PPIL2Q13356 520 aa12.23□□□□□ -0.45
SYN3-206ENST00000461446 NOM1Q5C9Z4 860 aaKnown RBP12.23□□□□□ -0.45
SYN3-206ENST00000461446 OTUD7BQ6GQQ9 843 aa12.23□□□□□ -0.45
SYN3-206ENST00000461446 CTU1Q7Z7A3 348 aaKnown RBP12.23□□□□□ -0.45
SYN3-206ENST00000461446 MIGA1Q8NAN2 632 aa12.23□□□□□ -0.45
SYN3-206ENST00000461446 TGFBRAP1Q8WUH2 860 aa12.23□□□□□ -0.45
SYN3-206ENST00000461446 OSBPL5Q9H0X9 879 aaPredicted RBP12.23□□□□□ -0.45
SYN3-206ENST00000461446 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.23□□□□□ -0.45
SYN3-206ENST00000461446 LAMB1P07942 1786 aa12.23□□□□□ -0.45
SYN3-206ENST00000461446 MAGEB6P1A0A0J9YX57 407 aa12.22□□□□□ -0.45
SYN3-206ENST00000461446 BTBD19C9JJ37 291 aa12.22□□□□□ -0.45
SYN3-206ENST00000461446 CETPP11597 493 aa12.22□□□□□ -0.45
SYN3-206ENST00000461446 SDSP20132 328 aa12.22□□□□□ -0.45
SYN3-206ENST00000461446 SNAPC2Q13487 334 aa12.22□□□□□ -0.45
SYN3-206ENST00000461446 NOL9Q5SY16 702 aaKnown RBP12.22□□□□□ -0.45
SYN3-206ENST00000461446 CCDC84Q86UT8 332 aaPredicted RBP12.22□□□□□ -0.45
SYN3-206ENST00000461446 CERS3Q8IU89 383 aa12.22□□□□□ -0.45
SYN3-206ENST00000461446 MAPKAPK5Q8IW41 473 aa12.22□□□□□ -0.45
SYN3-206ENST00000461446 APPBP2Q92624 585 aa12.22□□□□□ -0.45
SYN3-206ENST00000461446 RIOK1Q9BRS2 568 aaKnown RBP12.22□□□□□ -0.45
SYN3-206ENST00000461446 CAP1Q01518 475 aa12.21□□□□□ -0.45
SYN3-206ENST00000461446 RRP1BQ14684 758 aaKnown RBP12.21□□□□□ -0.45
SYN3-206ENST00000461446 TAF1CQ15572 869 aaPredicted RBP12.21□□□□□ -0.45
SYN3-206ENST00000461446 SLC4A8Q2Y0W8 1093 aa12.21□□□□□ -0.45
SYN3-206ENST00000461446 ZMYM1Q5SVZ6 1142 aa12.21□□□□□ -0.45
SYN3-206ENST00000461446 SCYL3Q8IZE3 742 aa12.21□□□□□ -0.45
SYN3-206ENST00000461446 OSBP2Q969R2 916 aa12.21□□□□□ -0.45
SYN3-206ENST00000461446 PUS7LQ9H0K6 701 aaKnown RBP12.21□□□□□ -0.45
SYN3-206ENST00000461446 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.21□□□□□ -0.45
SYN3-206ENST00000461446 PICK1Q9NRD5 415 aa12.21□□□□□ -0.45
SYN3-206ENST00000461446 SAP30BPQ9UHR5 308 aaKnown RBP12.21□□□□□ -0.45
SYN3-206ENST00000461446 PALD1Q9ULE6 856 aa12.21□□□□□ -0.45
SYN3-206ENST00000461446 ZHX2Q9Y6X8 837 aa12.21□□□□□ -0.45
SYN3-206ENST00000461446 FLT1P17948 1338 aa12.2□□□□□ -0.46
SYN3-206ENST00000461446 MYH7P12883 1935 aa12.2□□□□□ -0.46
SYN3-206ENST00000461446 TBC1D12O60347 775 aa12.2□□□□□ -0.46
SYN3-206ENST00000461446 CTNND1O60716 968 aaKnown RBP12.2□□□□□ -0.46
SYN3-206ENST00000461446 MBD4O95243 580 aa12.2□□□□□ -0.46
SYN3-206ENST00000461446 PTPRAP18433 802 aa12.2□□□□□ -0.46
SYN3-206ENST00000461446 MOGSQ13724 837 aa12.2□□□□□ -0.46
SYN3-206ENST00000461446 KCNH4Q9UQ05 1017 aa12.2□□□□□ -0.46
SYN3-206ENST00000461446 HIP1O00291 1037 aa12.19□□□□□ -0.46
SYN3-206ENST00000461446 BMP2KLQ5H9B9 411 aa12.19□□□□□ -0.46
SYN3-206ENST00000461446 LCORLQ8N3X6 602 aa12.19□□□□□ -0.46
SYN3-206ENST00000461446 CD99L2Q8TCZ2 262 aa12.19□□□□□ -0.46
SYN3-206ENST00000461446 STRBPQ96SI9 672 aaKnown RBP12.19□□□□□ -0.46
SYN3-206ENST00000461446 SEC62Q99442 399 aaKnown RBP12.19□□□□□ -0.46
SYN3-206ENST00000461446 ARMT1Q9H993 441 aa12.19□□□□□ -0.46
SYN3-206ENST00000461446 ZFYVE28Q9HCC9 887 aa12.19□□□□□ -0.46
SYN3-206ENST00000461446 HELLSQ9NRZ9 838 aa12.19□□□□□ -0.46
SYN3-206ENST00000461446 PI4KBQ9UBF8 816 aa12.19□□□□□ -0.46
SYN3-206ENST00000461446 COL2A1P02458 1487 aaPredicted RBP12.19□□□□□ -0.46
SYN3-206ENST00000461446 CDK5RAP2Q96SN8 1893 aa12.19□□□□□ -0.46
SYN3-206ENST00000461446 SP3Q02447 781 aa12.18□□□□□ -0.46
SYN3-206ENST00000461446 NMIQ13287 307 aaPredicted RBP12.18□□□□□ -0.46
SYN3-206ENST00000461446 OTOP1Q7RTM1 612 aa12.18□□□□□ -0.46
SYN3-206ENST00000461446 FAM227BQ96M60 508 aa12.18□□□□□ -0.46
SYN3-206ENST00000461446 CRNKL1Q9BZJ0 848 aaKnown RBP12.18□□□□□ -0.46
SYN3-206ENST00000461446 DNAJC18Q9H819 358 aa12.18□□□□□ -0.46
SYN3-206ENST00000461446 HPS5Q9UPZ3 1129 aa12.18□□□□□ -0.46
SYN3-206ENST00000461446 AFG3L2Q9Y4W6 797 aa12.18□□□□□ -0.46
SYN3-206ENST00000461446 TRIM17Q9Y577 477 aa12.18□□□□□ -0.46
SYN3-206ENST00000461446 SIPA1L1O43166 1804 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 A0A0D9SFI3 127 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 TRIM75PA6NK02 468 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 M0R2C6 588 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 PDHXO00330 501 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 CXCL11O14625 94 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 GPAA1O43292 621 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 TLR2O60603 784 aa12.17□□□□□ -0.46
SYN3-206ENST00000461446 ECM2O94769 699 aaPredicted RBP12.17□□□□□ -0.46
SYN3-206ENST00000461446 CAP2P40123 477 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms