RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TRIB2Q92519 343 aa21.41■■□□□ 1.02
TOP3A-202ENST00000461127 ASCC2Q9H1I8 757 aaPredicted RBP21.41■■□□□ 1.02
TOP3A-202ENST00000461127 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.41■■□□□ 1.02
TOP3A-202ENST00000461127 FBXO3Q9UK99 471 aa21.41■■□□□ 1.02
TOP3A-202ENST00000461127 SLURP2P0DP57 97 aa21.4■■□□□ 1.02
TOP3A-202ENST00000461127 CYP2B6P20813 491 aa21.4■■□□□ 1.02
TOP3A-202ENST00000461127 RFX5P48382 616 aaPredicted RBP21.4■■□□□ 1.02
TOP3A-202ENST00000461127 HMGCS2P54868 508 aa21.4■■□□□ 1.02
TOP3A-202ENST00000461127 SPTY2D1Q68D10 685 aaPredicted RBP21.4■■□□□ 1.02
TOP3A-202ENST00000461127 ATG9AQ7Z3C6 839 aa21.4■■□□□ 1.02
TOP3A-202ENST00000461127 TRMT44Q8IYL2 757 aaKnown RBP21.4■■□□□ 1.02
TOP3A-202ENST00000461127 SOCS4Q8WXH5 440 aa21.4■■□□□ 1.02
TOP3A-202ENST00000461127 NUDT12Q9BQG2 462 aa21.4■■□□□ 1.02
TOP3A-202ENST00000461127 USP44Q9H0E7 712 aa21.4■■□□□ 1.02
TOP3A-202ENST00000461127 DDX4Q9NQI0 724 aaKnown RBP21.4■■□□□ 1.02
TOP3A-202ENST00000461127 LOC285556D6RIA3 1793 aa21.39■■□□□ 1.01
TOP3A-202ENST00000461127 PTPRCP08575 1304 aa21.39■■□□□ 1.01
TOP3A-202ENST00000461127 BTDP43251 543 aa21.39■■□□□ 1.01
TOP3A-202ENST00000461127 PHKA1P46020 1223 aa21.39■■□□□ 1.01
TOP3A-202ENST00000461127 MDM2Q00987 491 aaPredicted RBP21.39■■□□□ 1.01
TOP3A-202ENST00000461127 MAP3K21Q5TCX8 1036 aa21.39■■□□□ 1.01
TOP3A-202ENST00000461127 FAM163AQ96GL9 167 aaPredicted RBP21.39■■□□□ 1.01
TOP3A-202ENST00000461127 SIL1Q9H173 461 aa21.39■■□□□ 1.01
TOP3A-202ENST00000461127 MORF4L1Q9UBU8 362 aa21.39■■□□□ 1.01
TOP3A-202ENST00000461127 ABCF2Q9UG63 623 aa21.39■■□□□ 1.01
TOP3A-202ENST00000461127 XRCC5P13010 732 aaKnown RBP21.38■■□□□ 1.01
TOP3A-202ENST00000461127 IRX3P78415 501 aaPredicted RBP21.38■■□□□ 1.01
TOP3A-202ENST00000461127 PDE3AQ14432 1141 aa21.38■■□□□ 1.01
TOP3A-202ENST00000461127 LBHD1Q9BQE6 289 aaPredicted RBP21.38■■□□□ 1.01
TOP3A-202ENST00000461127 AS3MTQ9HBK9 375 aa21.38■■□□□ 1.01
TOP3A-202ENST00000461127 POTEB2H3BUK9 544 aa21.37■■□□□ 1.01
TOP3A-202ENST00000461127 CCER2I3L3R5 266 aa21.37■■□□□ 1.01
TOP3A-202ENST00000461127 CIAO1O76071 339 aa21.37■■□□□ 1.01
TOP3A-202ENST00000461127 COL6A1P12109 1028 aa21.37■■□□□ 1.01
TOP3A-202ENST00000461127 ZKSCAN1P17029 563 aaPredicted RBP21.37■■□□□ 1.01
TOP3A-202ENST00000461127 CCAR1Q8IX12 1150 aaKnown RBP21.37■■□□□ 1.01
TOP3A-202ENST00000461127 MROH7-TTC4A0A0A0MT08 1334 aa21.36■■□□□ 1.01
TOP3A-202ENST00000461127 FAM196BA6NMK8 535 aa21.36■■□□□ 1.01
TOP3A-202ENST00000461127 USP17L5A8MUK1 530 aa21.36■■□□□ 1.01
TOP3A-202ENST00000461127 ZBTB22O15209 634 aa21.36■■□□□ 1.01
TOP3A-202ENST00000461127 NPM3O75607 178 aaKnown RBP21.36■■□□□ 1.01
TOP3A-202ENST00000461127 LRRC26Q2I0M4 334 aa21.36■■□□□ 1.01
TOP3A-202ENST00000461127 SH3D19Q5HYK7 790 aa21.36■■□□□ 1.01
TOP3A-202ENST00000461127 GUCD1Q96NT3 240 aa21.36■■□□□ 1.01
TOP3A-202ENST00000461127 MRS2Q9HD23 443 aa21.36■■□□□ 1.01
TOP3A-202ENST00000461127 PLXNB2O15031 1838 aa21.35■■□□□ 1.01
TOP3A-202ENST00000461127 CAP2P40123 477 aa21.35■■□□□ 1.01
TOP3A-202ENST00000461127 ZNF697Q5TEC3 545 aa21.35■■□□□ 1.01
TOP3A-202ENST00000461127 CCDC102BQ68D86 513 aa21.35■■□□□ 1.01
TOP3A-202ENST00000461127 GPRC5AQ8NFJ5 357 aa21.35■■□□□ 1.01
TOP3A-202ENST00000461127 PDS5AQ29RF7 1337 aaKnown RBP21.34■■□□□ 1.01
TOP3A-202ENST00000461127 MAP4K4O95819 1239 aaPredicted RBP21.34■■□□□ 1.01
TOP3A-202ENST00000461127 MAPK4P31152 587 aa21.34■■□□□ 1.01
TOP3A-202ENST00000461127 IL15P40933 162 aaPredicted RBP21.34■■□□□ 1.01
TOP3A-202ENST00000461127 CACNB2Q08289 660 aaPredicted RBP21.34■■□□□ 1.01
TOP3A-202ENST00000461127 MRPL50Q8N5N7 158 aaKnown RBP21.34■■□□□ 1.01
TOP3A-202ENST00000461127 FAM161BQ96MY7 647 aa21.34■■□□□ 1.01
TOP3A-202ENST00000461127 TMOD4Q9NZQ9 345 aa21.34■■□□□ 1.01
TOP3A-202ENST00000461127 ATAD5Q96QE3 1844 aa21.34■■□□□ 1.01
TOP3A-202ENST00000461127 GPR75-ASB3A0A0A6YYF3 556 aa21.33■■□□□ 1.01
TOP3A-202ENST00000461127 RASGRF1Q13972 1273 aa21.33■■□□□ 1.01
TOP3A-202ENST00000461127 ERICH6Q7L0X2 663 aa21.33■■□□□ 1.01
TOP3A-202ENST00000461127 LAMA2P24043 3122 aaKnown RBP21.33■■□□□ 1
TOP3A-202ENST00000461127 RGS2P41220 211 aa21.32■■□□□ 1
TOP3A-202ENST00000461127 RHBDL3P58872 404 aa21.32■■□□□ 1
TOP3A-202ENST00000461127 PRKAG2Q9UGJ0 569 aa21.32■■□□□ 1
TOP3A-202ENST00000461127 HERC5Q9UII4 1024 aaKnown RBP21.32■■□□□ 1
TOP3A-202ENST00000461127 COL2A1P02458 1487 aaPredicted RBP21.32■■□□□ 1
TOP3A-202ENST00000461127 VCANP13611 3396 aa21.31■■□□□ 1
TOP3A-202ENST00000461127 LDHCP07864 332 aa21.31■■□□□ 1
TOP3A-202ENST00000461127 ADORA1P30542 326 aa21.31■■□□□ 1
TOP3A-202ENST00000461127 HOXA7P31268 230 aaPredicted RBP21.31■■□□□ 1
TOP3A-202ENST00000461127 HERVK_113P62684 666 aa21.31■■□□□ 1
TOP3A-202ENST00000461127 GSTO1P78417 241 aa21.31■■□□□ 1
TOP3A-202ENST00000461127 MECOMQ03112 1051 aa21.31■■□□□ 1
TOP3A-202ENST00000461127 MTMR2Q13614 643 aa21.31■■□□□ 1
TOP3A-202ENST00000461127 LHX8Q68G74 356 aa21.31■■□□□ 1
TOP3A-202ENST00000461127 P2RX7Q99572 595 aaKnown RBP21.31■■□□□ 1
TOP3A-202ENST00000461127 CWC22Q9HCG8 908 aaKnown RBP21.31■■□□□ 1
TOP3A-202ENST00000461127 UBTFL1P0CB47 393 aaPredicted RBP21.3■■□□□ 1
TOP3A-202ENST00000461127 CCND3P30281 292 aaPredicted RBP21.3■■□□□ 1
TOP3A-202ENST00000461127 BACE1P56817 501 aa21.3■■□□□ 1
TOP3A-202ENST00000461127 GTF3C2Q8WUA4 911 aaPredicted RBP21.3■■□□□ 1
TOP3A-202ENST00000461127 WDR18Q9BV38 432 aa21.3■■□□□ 1
TOP3A-202ENST00000461127 ASNSP08243 561 aa21.29■■□□□ 1
TOP3A-202ENST00000461127 APBA2Q99767 749 aa21.29■■□□□ 1
TOP3A-202ENST00000461127 SENP6Q9GZR1 1112 aaPredicted RBP21.29■■□□□ 1
TOP3A-202ENST00000461127 C19orf81C9J6K1 198 aa21.28■■□□□ 1
TOP3A-202ENST00000461127 ERVK-9P63128 1117 aa21.28■■□□□ 1
TOP3A-202ENST00000461127 ERVK-24P63145 666 aa21.28■■□□□ 1
TOP3A-202ENST00000461127 MVPQ14764 893 aaKnown RBP21.28■■□□□ 1
TOP3A-202ENST00000461127 GPR142Q7Z601 462 aa21.28■■□□□ 1
TOP3A-202ENST00000461127 PLEKHH3Q7Z736 793 aa21.28■■□□□ 1
TOP3A-202ENST00000461127 USP6NLQ92738 828 aa21.28■■□□□ 1
TOP3A-202ENST00000461127 TXNRD2Q9NNW7 524 aa21.28■■□□□ 1
TOP3A-202ENST00000461127 HDAC5Q9UQL6 1122 aa21.28■■□□□ 1
TOP3A-202ENST00000461127 DNAH12Q6ZR08 3092 aa21.27■■□□□ 1
TOP3A-202ENST00000461127 CCL14Q16627 93 aa21.27■■□□□ 1
TOP3A-202ENST00000461127 MFSD14CQ5VZR4 134 aa21.27■■□□□ 1
TOP3A-202ENST00000461127 MAFAQ8NHW3 353 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms