RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 RGMBQ6NW40 437 aa16.79■□□□□ 0.28
HDLBP-229ENST00000460826 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.79■□□□□ 0.28
HDLBP-229ENST00000460826 WRNIP1Q96S55 665 aa16.79■□□□□ 0.28
HDLBP-229ENST00000460826 PI4KBQ9UBF8 816 aa16.79■□□□□ 0.28
HDLBP-229ENST00000460826 ZNF112Q9UJU3 913 aa16.79■□□□□ 0.28
HDLBP-229ENST00000460826 PHF20L1A8MW92 1017 aa16.78■□□□□ 0.28
HDLBP-229ENST00000460826 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
HDLBP-229ENST00000460826 HIP1O00291 1037 aa16.78■□□□□ 0.28
HDLBP-229ENST00000460826 TBC1D12O60347 775 aa16.78■□□□□ 0.28
HDLBP-229ENST00000460826 POLR3DP05423 398 aaPredicted RBP16.78■□□□□ 0.28
HDLBP-229ENST00000460826 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
HDLBP-229ENST00000460826 GNAT2P19087 354 aa16.78■□□□□ 0.28
HDLBP-229ENST00000460826 MAP3K9P80192 1104 aa16.78■□□□□ 0.28
HDLBP-229ENST00000460826 RRP1BQ14684 758 aaKnown RBP16.78■□□□□ 0.28
HDLBP-229ENST00000460826 CTR9Q6PD62 1173 aa16.78■□□□□ 0.28
HDLBP-229ENST00000460826 PAXIP1Q6ZW49 1069 aaPredicted RBP16.78■□□□□ 0.28
HDLBP-229ENST00000460826 METTL16Q86W50 562 aaKnown RBP16.78■□□□□ 0.28
HDLBP-229ENST00000460826 DNAJC5GQ8N7S2 189 aa16.78■□□□□ 0.28
HDLBP-229ENST00000460826 ZKSCAN4Q969J2 545 aaPredicted RBP16.78■□□□□ 0.28
HDLBP-229ENST00000460826 HHIPL1Q96JK4 782 aa16.78■□□□□ 0.28
HDLBP-229ENST00000460826 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.78■□□□□ 0.28
HDLBP-229ENST00000460826 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
HDLBP-229ENST00000460826 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
HDLBP-229ENST00000460826 USP17L21D6R901 530 aa16.77■□□□□ 0.28
HDLBP-229ENST00000460826 VEGFBP49765 207 aa16.77■□□□□ 0.28
HDLBP-229ENST00000460826 ZNF157P51786 506 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-229ENST00000460826 GRM1Q13255 1194 aa16.77■□□□□ 0.28
HDLBP-229ENST00000460826 VGLL4Q14135 290 aa16.77■□□□□ 0.28
HDLBP-229ENST00000460826 TTC6Q86TZ1 520 aa16.77■□□□□ 0.28
HDLBP-229ENST00000460826 ANKRD13AQ8IZ07 590 aa16.77■□□□□ 0.28
HDLBP-229ENST00000460826 IFNL3Q8IZI9 196 aa16.77■□□□□ 0.28
HDLBP-229ENST00000460826 CAPNS2Q96L46 248 aa16.77■□□□□ 0.28
HDLBP-229ENST00000460826 SNCAIPQ9Y6H5 919 aa16.77■□□□□ 0.28
HDLBP-229ENST00000460826 PHIPQ8WWQ0 1821 aa16.77■□□□□ 0.27
HDLBP-229ENST00000460826 FAM155AB1AL88 458 aaPredicted RBP16.76■□□□□ 0.27
HDLBP-229ENST00000460826 APPP05067 770 aa16.76■□□□□ 0.27
HDLBP-229ENST00000460826 C12orf60Q5U649 245 aa16.76■□□□□ 0.27
HDLBP-229ENST00000460826 GIMAP6Q6P9H5 292 aa16.76■□□□□ 0.27
HDLBP-229ENST00000460826 RASAL3Q86YV0 1011 aa16.76■□□□□ 0.27
HDLBP-229ENST00000460826 FOXP4Q8IVH2 680 aaPredicted RBP16.76■□□□□ 0.27
HDLBP-229ENST00000460826 DYNLL2Q96FJ2 89 aa16.76■□□□□ 0.27
HDLBP-229ENST00000460826 EHD4Q9H223 541 aa16.76■□□□□ 0.27
HDLBP-229ENST00000460826 ELP3Q9H9T3 547 aa16.76■□□□□ 0.27
HDLBP-229ENST00000460826 HERC5Q9UII4 1024 aaKnown RBP16.76■□□□□ 0.27
HDLBP-229ENST00000460826 THSD7BQ9C0I4 1608 aa16.75■□□□□ 0.27
HDLBP-229ENST00000460826 SLC10A3P09131 477 aa16.75■□□□□ 0.27
HDLBP-229ENST00000460826 HSPD1P10809 573 aaKnown RBP16.75■□□□□ 0.27
HDLBP-229ENST00000460826 TDO2P48775 406 aa16.75■□□□□ 0.27
HDLBP-229ENST00000460826 GABPAQ06546 454 aa16.75■□□□□ 0.27
HDLBP-229ENST00000460826 CRACR2BQ8N4Y2 399 aaPredicted RBP16.75■□□□□ 0.27
HDLBP-229ENST00000460826 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
HDLBP-229ENST00000460826 SLC10A4Q96EP9 437 aa16.75■□□□□ 0.27
HDLBP-229ENST00000460826 DDRGK1Q96HY6 314 aa16.75■□□□□ 0.27
HDLBP-229ENST00000460826 ZIC5Q96T25 663 aa16.75■□□□□ 0.27
HDLBP-229ENST00000460826 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.75■□□□□ 0.27
HDLBP-229ENST00000460826 SERPINB13Q9UIV8 391 aa16.75■□□□□ 0.27
HDLBP-229ENST00000460826 WDR33Q9C0J8 1336 aaKnown RBP16.74■□□□□ 0.27
HDLBP-229ENST00000460826 UNCXA6NJT0 531 aa16.74■□□□□ 0.27
HDLBP-229ENST00000460826 AOC2O75106 756 aa16.74■□□□□ 0.27
HDLBP-229ENST00000460826 SHMT1P34896 483 aa16.74■□□□□ 0.27
HDLBP-229ENST00000460826 GJA5P36382 358 aa16.74■□□□□ 0.27
HDLBP-229ENST00000460826 JAG1P78504 1218 aa16.74■□□□□ 0.27
HDLBP-229ENST00000460826 SHROOM1Q2M3G4 852 aaPredicted RBP16.74■□□□□ 0.27
HDLBP-229ENST00000460826 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
HDLBP-229ENST00000460826 NOL9Q5SY16 702 aaKnown RBP16.74■□□□□ 0.27
HDLBP-229ENST00000460826 SLC44A5Q8NCS7 719 aa16.74■□□□□ 0.27
HDLBP-229ENST00000460826 ARPP21Q9UBL0 812 aaPredicted RBP16.74■□□□□ 0.27
HDLBP-229ENST00000460826 CSADQ9Y600 493 aa16.74■□□□□ 0.27
HDLBP-229ENST00000460826 LAMA4Q16363 1823 aa16.74■□□□□ 0.27
HDLBP-229ENST00000460826 RAD50Q92878 1312 aa16.73■□□□□ 0.27
HDLBP-229ENST00000460826 PTPRFP10586 1907 aa16.73■□□□□ 0.27
HDLBP-229ENST00000460826 MINDY4BA8MYZ0 360 aa16.73■□□□□ 0.27
HDLBP-229ENST00000460826 GDF11O95390 407 aa16.73■□□□□ 0.27
HDLBP-229ENST00000460826 MKRN3Q13064 507 aaKnown RBP16.73■□□□□ 0.27
HDLBP-229ENST00000460826 WNK4Q96J92 1243 aa16.73■□□□□ 0.27
HDLBP-229ENST00000460826 TRIM34Q9BYJ4 488 aa16.73■□□□□ 0.27
HDLBP-229ENST00000460826 NACAP1Q9BZK3 213 aa16.73■□□□□ 0.27
HDLBP-229ENST00000460826 NAPBQ9H115 298 aa16.73■□□□□ 0.27
HDLBP-229ENST00000460826 GTF3C3Q9Y5Q9 886 aa16.73■□□□□ 0.27
HDLBP-229ENST00000460826 PCNTO95613 3336 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 SGSM2O43147 1006 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 CTNND1O60716 968 aaKnown RBP16.72■□□□□ 0.27
HDLBP-229ENST00000460826 CAP2P40123 477 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 ECE1P42892 770 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 MFAP1P55081 439 aaKnown RBP16.72■□□□□ 0.27
HDLBP-229ENST00000460826 ALX1Q15699 326 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 SPRYD7Q5W111 196 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 TATDN1Q6P1N9 297 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 CCDC84Q86UT8 332 aaPredicted RBP16.72■□□□□ 0.27
HDLBP-229ENST00000460826 AMOTL1Q8IY63 956 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 SCYL3Q8IZE3 742 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 STK11IPQ8N1F8 1099 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 CCDC102AQ96A19 550 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 ROBO3Q96MS0 1386 aa16.72■□□□□ 0.27
HDLBP-229ENST00000460826 SPDYE5A6NIY4 337 aa16.71■□□□□ 0.27
HDLBP-229ENST00000460826 FGAP02671 866 aa16.71■□□□□ 0.27
HDLBP-229ENST00000460826 CDK8P49336 464 aa16.71■□□□□ 0.27
HDLBP-229ENST00000460826 C16orf86Q6ZW13 317 aa16.71■□□□□ 0.27
HDLBP-229ENST00000460826 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
HDLBP-229ENST00000460826 OPTNQ96CV9 577 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms