RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 LIG1P18858 919 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 CPSF6Q16630 551 aaKnown RBP eCLIP4.36□□□□□ -1.71
HPS3-203ENST00000460822 KCNB2Q92953 911 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 SAMM50Q9Y512 469 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 PRR19A6NJB7 356 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 ECEL1O95672 775 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 F13BP05160 661 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 NFICP08651 508 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 GSTP1P09211 210 aaKnown RBP4.36□□□□□ -1.71
HPS3-203ENST00000460822 NCLP19338 710 aaKnown RBP4.36□□□□□ -1.71
HPS3-203ENST00000460822 GSTT1P30711 240 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 CYP27A1Q02318 531 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 ZNF662Q6ZS27 426 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 GLIS3Q8NEA6 775 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 EZH1Q92800 747 aaPredicted RBP4.36□□□□□ -1.71
HPS3-203ENST00000460822 WDR18Q9BV38 432 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 ATXN3LQ9H3M9 355 aa4.36□□□□□ -1.71
HPS3-203ENST00000460822 TLDC2A0PJX2 215 aa4.35□□□□□ -1.71
HPS3-203ENST00000460822 KIAA1324LA8MWY0 1029 aaPredicted RBP4.35□□□□□ -1.71
HPS3-203ENST00000460822 CYP26A1O43174 497 aa4.35□□□□□ -1.71
HPS3-203ENST00000460822 WNT11O96014 354 aa4.35□□□□□ -1.71
HPS3-203ENST00000460822 FAAP100Q0VG06 881 aa4.35□□□□□ -1.71
HPS3-203ENST00000460822 BMS1Q14692 1282 aaKnown RBP4.35□□□□□ -1.71
HPS3-203ENST00000460822 CCDC85BQ15834 202 aaPredicted RBP4.35□□□□□ -1.71
HPS3-203ENST00000460822 SPON2Q9BUD6 331 aa4.35□□□□□ -1.71
HPS3-203ENST00000460822 NOC4LQ9BVI4 516 aaKnown RBP4.35□□□□□ -1.71
HPS3-203ENST00000460822 OSBPL2Q9H1P3 480 aa4.35□□□□□ -1.71
HPS3-203ENST00000460822 CBX8Q9HC52 389 aa4.35□□□□□ -1.71
HPS3-203ENST00000460822 KRT82Q9NSB4 513 aa4.35□□□□□ -1.71
HPS3-203ENST00000460822 DAGLAQ9Y4D2 1042 aa4.35□□□□□ -1.71
HPS3-203ENST00000460822 SYNGAP1Q96PV0 1343 aa4.35□□□□□ -1.71
HPS3-203ENST00000460822 RNGTTO60942 597 aaKnown RBP4.34□□□□□ -1.71
HPS3-203ENST00000460822 MED26O95402 600 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 ID3Q02535 119 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 SOGA3Q5TF21 947 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 ZAR1Q86SH2 424 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 KIAA0825Q8IV33 1275 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 SULF2Q8IWU5 870 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 C3orf58Q8NDZ4 430 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 RASGRP4Q8TDF6 673 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 CEP44Q9C0F1 390 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 CCDC86Q9H6F5 360 aaKnown RBP4.34□□□□□ -1.71
HPS3-203ENST00000460822 SSU72Q9NP77 194 aaKnown RBP4.34□□□□□ -1.71
HPS3-203ENST00000460822 FAM105AQ9NUU6 356 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 ANGEL1Q9UNK9 670 aaKnown RBP4.34□□□□□ -1.71
HPS3-203ENST00000460822 OAS3Q9Y6K5 1087 aaKnown RBP4.34□□□□□ -1.71
HPS3-203ENST00000460822 FBXO24O75426 580 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 FOSL1P15407 271 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 NME2P22392 152 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 ARNTP27540 789 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 ACSBG1Q96GR2 724 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 SEMA6CQ9H3T2 930 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 ACSS3Q9H6R3 686 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 LGR6Q9HBX8 967 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 TBX22Q9Y458 520 aa4.34□□□□□ -1.71
HPS3-203ENST00000460822 MINDY4BA8MYZ0 360 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 TMPRSS2O15393 492 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 SSBP05455 408 aaKnown RBP eCLIP4.33□□□□□ -1.72
HPS3-203ENST00000460822 GP2P55259 537 aaKnown RBP4.33□□□□□ -1.72
HPS3-203ENST00000460822 CYP27C1Q4G0S4 372 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 SDE2Q6IQ49 451 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 DTX1Q86Y01 620 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 CKAP2LQ8IYA6 745 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 NLGN1Q8N2Q7 840 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 ZNF408Q9H9D4 720 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 LRRC4CQ9HCJ2 640 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 PICK1Q9NRD5 415 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 ADAMTS1Q9UHI8 967 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 PPP1R9AQ9ULJ8 1098 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 SPINK2P20155 84 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 GBP2P32456 591 aaPredicted RBP4.33□□□□□ -1.72
HPS3-203ENST00000460822 ADMP35318 185 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 NASPP49321 788 aaPredicted RBP4.33□□□□□ -1.72
HPS3-203ENST00000460822 PWP1Q13610 501 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 KIF4BQ2VIQ3 1234 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 MAP1SQ66K74 1059 aaPredicted RBP4.33□□□□□ -1.72
HPS3-203ENST00000460822 TPTE2Q6XPS3 522 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 RSRP1Q9BUV0 290 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 CRIM1Q9NZV1 1036 aa4.33□□□□□ -1.72
HPS3-203ENST00000460822 FAM170BA6NMN3 283 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 ZNF862O60290 1169 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 HOXA10P31260 410 aaPredicted RBP4.32□□□□□ -1.72
HPS3-203ENST00000460822 EIF4A3P38919 411 aaKnown RBP4.32□□□□□ -1.72
HPS3-203ENST00000460822 LRRC14Q15048 493 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 MAP3K11Q16584 847 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 ARHGAP27Q6ZUM4 889 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 JAZF1Q86VZ6 243 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 RELL1Q8IUW5 271 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 SMYD4Q8IYR2 804 aaPredicted RBP4.32□□□□□ -1.72
HPS3-203ENST00000460822 ANKRD13AQ8IZ07 590 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 WDR89Q96FK6 387 aaPredicted RBP4.32□□□□□ -1.72
HPS3-203ENST00000460822 SEC16BQ96JE7 1060 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 TMEM74Q96NL1 305 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 FANCD2OSQ96PS1 177 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 GSX1Q9H4S2 264 aaPredicted RBP4.32□□□□□ -1.72
HPS3-203ENST00000460822 PCOLCE2Q9UKZ9 415 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 PPM1HQ9ULR3 514 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.32□□□□□ -1.72
HPS3-203ENST00000460822 EFR3BQ9Y2G0 817 aa4.32□□□□□ -1.72
HPS3-203ENST00000460822 MRVI1Q9Y6F6 885 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms