RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 GJA8P48165 433 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 NASPP49321 788 aaPredicted RBP7.5□□□□□ -1.21
VBP1-202ENST00000460509 ZNF165P49910 485 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 ARID5AQ03989 594 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 PDE4BQ07343 736 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 CDPF1Q6NVV7 123 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 Q6ZS46 218 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 CYFIP1Q7L576 1253 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 SLITRK4Q8IW52 837 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 RNF214Q8ND24 703 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 CPLX3Q8WVH0 158 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 TP53INP1Q96A56 240 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 FAM46AQ96IP4 442 aaKnown RBP7.5□□□□□ -1.21
VBP1-202ENST00000460509 SPATA32Q96LK8 384 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 C8orf37Q96NL8 207 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 FERD3LQ96RJ6 166 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 YIPF2Q9BWQ6 316 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 PPP1R1BQ9UD71 204 aaPredicted RBP7.5□□□□□ -1.21
VBP1-202ENST00000460509 DAGLAQ9Y4D2 1042 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 PCDHB14Q9Y5E9 798 aa7.5□□□□□ -1.21
VBP1-202ENST00000460509 FANCGO15287 622 aa7.49□□□□□ -1.21
VBP1-202ENST00000460509 ZBTB37Q5TC79 503 aa7.49□□□□□ -1.21
VBP1-202ENST00000460509 SMYD4Q8IYR2 804 aaPredicted RBP7.49□□□□□ -1.21
VBP1-202ENST00000460509 DZIP1LQ8IYY4 767 aaKnown RBP7.49□□□□□ -1.21
VBP1-202ENST00000460509 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.49□□□□□ -1.21
VBP1-202ENST00000460509 LRRC3Q9BY71 257 aa7.49□□□□□ -1.21
VBP1-202ENST00000460509 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
VBP1-202ENST00000460509 WNT10AQ9GZT5 417 aa7.49□□□□□ -1.21
VBP1-202ENST00000460509 POLR3KQ9Y2Y1 108 aaPredicted RBP7.49□□□□□ -1.21
VBP1-202ENST00000460509 DHX15O43143 795 aaKnown RBP7.48□□□□□ -1.21
VBP1-202ENST00000460509 NEFMP07197 916 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 NFICP08651 508 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 ATF4P18848 351 aaPredicted RBP7.48□□□□□ -1.21
VBP1-202ENST00000460509 CLCQ05315 142 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 NFKBIBQ15653 356 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 UVSSAQ2YD98 709 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 CCDC81Q6ZN84 652 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.48□□□□□ -1.21
VBP1-202ENST00000460509 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.48□□□□□ -1.21
VBP1-202ENST00000460509 ARMC10Q8N2F6 343 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 ZNF507Q8TCN5 953 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 RASGRP4Q8TDF6 673 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 ISL2Q96A47 359 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 MYRFLQ96LU7 910 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 TANGO6Q9C0B7 1094 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 PPT2Q9UMR5 302 aa7.48□□□□□ -1.21
VBP1-202ENST00000460509 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.47□□□□□ -1.21
VBP1-202ENST00000460509 SSBP05455 408 aaKnown RBP eCLIP7.47□□□□□ -1.21
VBP1-202ENST00000460509 FURINP09958 794 aa7.47□□□□□ -1.21
VBP1-202ENST00000460509 MAP4P27816 1152 aaKnown RBP7.47□□□□□ -1.21
VBP1-202ENST00000460509 RING1Q06587 406 aa7.47□□□□□ -1.21
VBP1-202ENST00000460509 MLECQ14165 292 aa7.47□□□□□ -1.21
VBP1-202ENST00000460509 XP32Q5T750 250 aa7.47□□□□□ -1.21
VBP1-202ENST00000460509 SLC43A3Q8NBI5 491 aa7.47□□□□□ -1.21
VBP1-202ENST00000460509 REV1Q9UBZ9 1251 aa7.47□□□□□ -1.21
VBP1-202ENST00000460509 PRKAG2Q9UGJ0 569 aa7.47□□□□□ -1.21
VBP1-202ENST00000460509 KLHL3Q9UH77 587 aa7.47□□□□□ -1.21
VBP1-202ENST00000460509 FAM95CA0A1B0GW59 222 aa7.46□□□□□ -1.22
VBP1-202ENST00000460509 K7ELQ4 463 aaPredicted RBP7.46□□□□□ -1.22
VBP1-202ENST00000460509 HTR3BO95264 441 aa7.46□□□□□ -1.22
VBP1-202ENST00000460509 COL9A2Q14055 689 aaPredicted RBP7.46□□□□□ -1.22
VBP1-202ENST00000460509 BEND4Q6ZU67 534 aa7.46□□□□□ -1.22
VBP1-202ENST00000460509 FAM20CQ8IXL6 584 aa7.46□□□□□ -1.22
VBP1-202ENST00000460509 SEC16BQ96JE7 1060 aa7.46□□□□□ -1.22
VBP1-202ENST00000460509 CRBNQ96SW2 442 aa7.46□□□□□ -1.22
VBP1-202ENST00000460509 GSX1Q9H4S2 264 aaPredicted RBP7.46□□□□□ -1.22
VBP1-202ENST00000460509 FBRSQ9HAH7 460 aa7.46□□□□□ -1.22
VBP1-202ENST00000460509 PCOLCE2Q9UKZ9 415 aa7.46□□□□□ -1.22
VBP1-202ENST00000460509 DOC2BQ14184 412 aa7.45□□□□□ -1.22
VBP1-202ENST00000460509 MAP7Q14244 749 aa7.45□□□□□ -1.22
VBP1-202ENST00000460509 UBE3DQ7Z6J8 389 aa7.45□□□□□ -1.22
VBP1-202ENST00000460509 HID1Q8IV36 788 aa7.45□□□□□ -1.22
VBP1-202ENST00000460509 REXO1Q8N1G1 1221 aaKnown RBP7.45□□□□□ -1.22
VBP1-202ENST00000460509 KCT2Q8NC54 265 aa7.45□□□□□ -1.22
VBP1-202ENST00000460509 XAGE3Q8WTP9 111 aa7.45□□□□□ -1.22
VBP1-202ENST00000460509 SEMA6CQ9H3T2 930 aa7.45□□□□□ -1.22
VBP1-202ENST00000460509 ACSS3Q9H6R3 686 aa7.45□□□□□ -1.22
VBP1-202ENST00000460509 USP35Q9P2H5 1018 aa7.45□□□□□ -1.22
VBP1-202ENST00000460509 TACC3Q9Y6A5 838 aa7.45□□□□□ -1.22
VBP1-202ENST00000460509 MRVI1Q9Y6F6 885 aa7.45□□□□□ -1.22
VBP1-202ENST00000460509 ATP2B1P20020 1258 aa7.44□□□□□ -1.22
VBP1-202ENST00000460509 SOX9P48436 509 aa7.44□□□□□ -1.22
VBP1-202ENST00000460509 NKG7Q16617 165 aa7.44□□□□□ -1.22
VBP1-202ENST00000460509 PAOXQ6QHF9 649 aa7.44□□□□□ -1.22
VBP1-202ENST00000460509 FAM13CQ8NE31 585 aa7.44□□□□□ -1.22
VBP1-202ENST00000460509 ANAPC16Q96DE5 110 aa7.44□□□□□ -1.22
VBP1-202ENST00000460509 DPH2Q9BQC3 489 aaPredicted RBP7.44□□□□□ -1.22
VBP1-202ENST00000460509 SSBP4Q9BWG4 385 aaPredicted RBP7.44□□□□□ -1.22
VBP1-202ENST00000460509 SRRTQ9BXP5 876 aaKnown RBP7.44□□□□□ -1.22
VBP1-202ENST00000460509 TPSG1Q9NRR2 321 aa7.44□□□□□ -1.22
VBP1-202ENST00000460509 STOML1Q9UBI4 398 aa7.44□□□□□ -1.22
VBP1-202ENST00000460509 UPK3BL1B0FP48 263 aa7.43□□□□□ -1.22
VBP1-202ENST00000460509 UPK3BL2E5RIL1 263 aa7.43□□□□□ -1.22
VBP1-202ENST00000460509 NTF4P34130 210 aa7.43□□□□□ -1.22
VBP1-202ENST00000460509 EIF6P56537 245 aaKnown RBP7.43□□□□□ -1.22
VBP1-202ENST00000460509 SF3A1Q15459 793 aaKnown RBP7.43□□□□□ -1.22
VBP1-202ENST00000460509 ACSF2Q96CM8 615 aaPredicted RBP7.43□□□□□ -1.22
VBP1-202ENST00000460509 TMEM87BQ96K49 555 aa7.43□□□□□ -1.22
VBP1-202ENST00000460509 ANTXR1Q9H6X2 564 aa7.43□□□□□ -1.22
VBP1-202ENST00000460509 EHMT1Q9H9B1 1298 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms