RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TSGA10IPQ3SY00 556 aa14.62□□□□□ -0.07
HDAC4-206ENST00000460235 AKNAD1Q5T1N1 836 aa14.62□□□□□ -0.07
HDAC4-206ENST00000460235 CREB3L3Q68CJ9 461 aa14.62□□□□□ -0.07
HDAC4-206ENST00000460235 ARMC9Q7Z3E5 817 aa14.62□□□□□ -0.07
HDAC4-206ENST00000460235 ZNF341Q9BYN7 854 aa14.62□□□□□ -0.07
HDAC4-206ENST00000460235 TMEM39BQ9GZU3 492 aa14.62□□□□□ -0.07
HDAC4-206ENST00000460235 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.62□□□□□ -0.07
HDAC4-206ENST00000460235 GOLGB1Q14789 3259 aaKnown RBP14.62□□□□□ -0.07
HDAC4-206ENST00000460235 CNTNAP1P78357 1384 aa14.61□□□□□ -0.07
HDAC4-206ENST00000460235 IREB2P48200 963 aaKnown RBP14.61□□□□□ -0.07
HDAC4-206ENST00000460235 C16orf86Q6ZW13 317 aa14.61□□□□□ -0.07
HDAC4-206ENST00000460235 METTL16Q86W50 562 aaKnown RBP14.61□□□□□ -0.07
HDAC4-206ENST00000460235 NCOA7Q8NI08 942 aa14.61□□□□□ -0.07
HDAC4-206ENST00000460235 STAG1Q8WVM7 1258 aa14.61□□□□□ -0.07
HDAC4-206ENST00000460235 ESR2Q92731 530 aa14.61□□□□□ -0.07
HDAC4-206ENST00000460235 C22orf23Q9BZE7 217 aa14.61□□□□□ -0.07
HDAC4-206ENST00000460235 IL25Q9H293 177 aa14.61□□□□□ -0.07
HDAC4-206ENST00000460235 CABP5Q9NP86 173 aa14.61□□□□□ -0.07
HDAC4-206ENST00000460235 TOMM22Q9NS69 142 aa14.61□□□□□ -0.07
HDAC4-206ENST00000460235 ROBO3Q96MS0 1386 aa14.6□□□□□ -0.07
HDAC4-206ENST00000460235 DDTLA6NHG4 134 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-206ENST00000460235 SLC27A2O14975 620 aa14.6□□□□□ -0.07
HDAC4-206ENST00000460235 SART3Q15020 963 aaKnown RBP14.6□□□□□ -0.07
HDAC4-206ENST00000460235 MAP1SQ66K74 1059 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-206ENST00000460235 ZNF784Q8NCA9 323 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-206ENST00000460235 CDCA5Q96FF9 252 aa14.6□□□□□ -0.07
HDAC4-206ENST00000460235 ASTN2O75129 1339 aaPredicted RBP14.6□□□□□ -0.07
HDAC4-206ENST00000460235 ERICH2A1L162 156 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 ORC4O43929 436 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 CYP21A2P08686 494 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 CDK8P49336 464 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 PLCD1P51178 756 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 HAND2P61296 217 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 MAP3K10Q02779 954 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 TTLL12Q14166 644 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-206ENST00000460235 CERKLQ49MI3 558 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-206ENST00000460235 IQCA1Q86XH1 822 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 ZFPM1Q8IX07 1006 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 C2orf69Q8N8R5 385 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 TEPSINQ96N21 525 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 MTA3Q9BTC8 594 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 TBC1D2Q9BYX2 928 aa14.59□□□□□ -0.07
HDAC4-206ENST00000460235 GLIS2Q9BZE0 524 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-206ENST00000460235 ADM5C9JUS6 153 aa14.58□□□□□ -0.08
HDAC4-206ENST00000460235 KIF3CO14782 793 aa14.58□□□□□ -0.08
HDAC4-206ENST00000460235 FOXP2O15409 715 aa14.58□□□□□ -0.08
HDAC4-206ENST00000460235 CTNND1O60716 968 aaKnown RBP14.58□□□□□ -0.08
HDAC4-206ENST00000460235 FGRP09769 529 aa14.58□□□□□ -0.08
HDAC4-206ENST00000460235 GABPAQ06546 454 aa14.58□□□□□ -0.08
HDAC4-206ENST00000460235 NBPF12Q5TAG4 269 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-206ENST00000460235 KCNB2Q92953 911 aa14.58□□□□□ -0.08
HDAC4-206ENST00000460235 TM6SF1Q9BZW5 370 aa14.58□□□□□ -0.08
HDAC4-206ENST00000460235 CSADQ9Y600 493 aa14.58□□□□□ -0.08
HDAC4-206ENST00000460235 ADAMTSL1Q8N6G6 1762 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 FOCADQ5VW36 1801 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 NAV1Q8NEY1 1877 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 MYH1P12882 1939 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 TSPY2A6NKD2 308 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 E7EWF7 191 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 RANBP6O60518 1105 aaKnown RBP14.57□□□□□ -0.08
HDAC4-206ENST00000460235 ASNSP08243 561 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 TSPY3P0CV98 308 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 TSPY8P0CW00 308 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 MCM5P33992 734 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 RBM25P49756 843 aaKnown RBP14.57□□□□□ -0.08
HDAC4-206ENST00000460235 RRP12Q5JTH9 1297 aaKnown RBP14.57□□□□□ -0.08
HDAC4-206ENST00000460235 TATDN1Q6P1N9 297 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 SH3BP5LQ7L8J4 393 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 TMTC2Q8N394 836 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 NEK1Q96PY6 1258 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 PICK1Q9NRD5 415 aa14.57□□□□□ -0.08
HDAC4-206ENST00000460235 CYP2D7A0A087X1C5 515 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 CYP2D6P10635 497 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 MAP3K9P80192 1104 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 FGD1P98174 961 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 CTDSPL2Q05D32 466 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 ABCB5Q2M3G0 1257 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 SLC4A8Q2Y0W8 1093 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 BLOC1S2Q6QNY1 142 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 TMEM179Q6ZVK1 233 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 MIGA2Q7L4E1 593 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 UBAC1Q9BSL1 405 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 CYP46A1Q9Y6A2 500 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 WDR19Q8NEZ3 1342 aa14.56□□□□□ -0.08
HDAC4-206ENST00000460235 MPHOSPH10O00566 681 aaKnown RBP14.55□□□□□ -0.08
HDAC4-206ENST00000460235 SEC24BO95487 1268 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 POTEJP0CG39 1038 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 MAP3K11Q16584 847 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 ANKRD13AQ8IZ07 590 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 TMEM87BQ96K49 555 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 TTC14Q96N46 770 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 WRNIP1Q96S55 665 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 SH2D4AQ9H788 454 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 KANSL2Q9H9L4 492 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 AS3MTQ9HBK9 375 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 GBA2Q9HCG7 927 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-206ENST00000460235 ZNF112Q9UJU3 913 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 SNX14Q9Y5W7 946 aa14.55□□□□□ -0.08
HDAC4-206ENST00000460235 CELF2O95319 508 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms