RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TIAM2Q8IVF5 1701 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 WDR19Q8NEZ3 1342 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 F8W031 263 aaPredicted RBP12.09□□□□□ -0.47
HERC4-207ENST00000460168 KDM4AO75164 1064 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 GJB2P29033 226 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 USP5P45974 858 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 ANTXR2P58335 489 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 ST3GAL1Q11201 340 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 SUPT20HQ8NEM7 779 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 GTF3C6Q969F1 213 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 BORCS6Q96GS4 357 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 GBP4Q96PP9 640 aa12.09□□□□□ -0.47
HERC4-207ENST00000460168 USP17L12C9JPN9 530 aa12.08□□□□□ -0.48
HERC4-207ENST00000460168 USP17L21D6R901 530 aa12.08□□□□□ -0.48
HERC4-207ENST00000460168 BTDP43251 543 aa12.08□□□□□ -0.48
HERC4-207ENST00000460168 AOC3Q16853 763 aa12.08□□□□□ -0.48
HERC4-207ENST00000460168 CCDC93Q567U6 631 aa12.08□□□□□ -0.48
HERC4-207ENST00000460168 CTR9Q6PD62 1173 aa12.08□□□□□ -0.48
HERC4-207ENST00000460168 SH3RF3Q8TEJ3 882 aaPredicted RBP12.08□□□□□ -0.48
HERC4-207ENST00000460168 TRIM34Q9BYJ4 488 aa12.08□□□□□ -0.48
HERC4-207ENST00000460168 SUGT1Q9Y2Z0 365 aa12.08□□□□□ -0.48
HERC4-207ENST00000460168 KIF13BQ9NQT8 1826 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 CYP2D7A0A087X1C5 515 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 ECE2O60344 883 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 DTNBO60941 627 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 KCNA3P22001 575 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 PPP4CP60510 307 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 MTA1Q13330 715 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 FOXD4L5Q5VV16 416 aaPredicted RBP12.07□□□□□ -0.48
HERC4-207ENST00000460168 CYB5R4Q7L1T6 521 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 FOXD4L4Q8WXT5 416 aaPredicted RBP12.07□□□□□ -0.48
HERC4-207ENST00000460168 ZBTB9Q96C00 473 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
HERC4-207ENST00000460168 ARPP21Q9UBL0 812 aaPredicted RBP12.07□□□□□ -0.48
HERC4-207ENST00000460168 ANAPC4Q9UJX5 808 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 ANGEL1Q9UNK9 670 aaKnown RBP12.07□□□□□ -0.48
HERC4-207ENST00000460168 TTF2Q9UNY4 1162 aaKnown RBP12.07□□□□□ -0.48
HERC4-207ENST00000460168 PPIP5K2O43314 1243 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 PFKFB2O60825 505 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 PLCG2P16885 1265 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 TGFB2P61812 414 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 KIAA2012Q0VF49 1180 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 SCRN1Q12765 414 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 CERS5Q8N5B7 392 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 ZNF274Q96GC6 653 aaPredicted RBP12.07□□□□□ -0.48
HERC4-207ENST00000460168 TMEM87BQ96K49 555 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 MXD3Q9BW11 206 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 MCM9Q9NXL9 1143 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 ZSWIM5Q9P217 1185 aa12.07□□□□□ -0.48
HERC4-207ENST00000460168 SNED1Q8TER0 1413 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 GPR75-ASB3A0A0A6YYF3 556 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 KLF18A0A0U1RQI7 1052 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 CCDC66A2RUB6 948 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 PSDA5PKW4 1024 aaPredicted RBP12.06□□□□□ -0.48
HERC4-207ENST00000460168 PDIA3P30101 505 aaKnown RBP12.06□□□□□ -0.48
HERC4-207ENST00000460168 MCM4P33991 863 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 CCT2P78371 535 aaKnown RBP12.06□□□□□ -0.48
HERC4-207ENST00000460168 SART3Q15020 963 aaKnown RBP12.06□□□□□ -0.48
HERC4-207ENST00000460168 ANKRD23Q86SG2 305 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 AMOTL1Q8IY63 956 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 ZNF513Q8N8E2 541 aaPredicted RBP12.06□□□□□ -0.48
HERC4-207ENST00000460168 NKX2-3Q8TAU0 364 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 TGFBRAP1Q8WUH2 860 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 ESR2Q92731 530 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 FAM163AQ96GL9 167 aaPredicted RBP12.06□□□□□ -0.48
HERC4-207ENST00000460168 KCNQ5Q9NR82 932 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 PIM2Q9P1W9 311 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 GOLGA8BA8MQT2 603 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 BRD1O95696 1058 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 SLC3A2P08195 630 aaKnown RBP12.06□□□□□ -0.48
HERC4-207ENST00000460168 SLC4A8Q2Y0W8 1093 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 TMEM67Q5HYA8 995 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 TIGD1Q96MW7 591 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 ZDHHC9Q9Y397 364 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 TACC3Q9Y6A5 838 aa12.06□□□□□ -0.48
HERC4-207ENST00000460168 GAKO14976 1311 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 WDR33Q9C0J8 1336 aaKnown RBP12.05□□□□□ -0.48
HERC4-207ENST00000460168 ERICH2A1L162 156 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 SMIM22K7EJ46 135 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 IFIT3O14879 490 aaKnown RBP12.05□□□□□ -0.48
HERC4-207ENST00000460168 STX6O43752 255 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 PCP11498 1178 aaKnown RBP12.05□□□□□ -0.48
HERC4-207ENST00000460168 CAPN2P17655 700 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 SYT1P21579 422 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 EVCP57679 992 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 STRIP1Q5VSL9 837 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 NFXL1Q6ZNB6 911 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 TEX11Q8IYF3 940 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 NCOA5Q9HCD5 579 aaKnown RBP12.05□□□□□ -0.48
HERC4-207ENST00000460168 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.05□□□□□ -0.48
HERC4-207ENST00000460168 DAGLAQ9Y4D2 1042 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 LAMB1P07942 1786 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 DDX11L8A8MPP1 907 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 SH2B2O14492 632 aaPredicted RBP12.05□□□□□ -0.48
HERC4-207ENST00000460168 USP17L8P0C7I0 530 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 SCNN1DP51172 638 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 SBK1Q52WX2 424 aa12.05□□□□□ -0.48
HERC4-207ENST00000460168 SOGA3Q5TF21 947 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms