RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 PPP4CP60510 307 aa27.87■■■□□ 2.05
PTPN4-207ENST00000460162 EAF2Q96CJ1 260 aaPredicted RBP27.87■■■□□ 2.05
PTPN4-207ENST00000460162 DHX36Q9H2U1 1008 aaKnown RBP27.87■■■□□ 2.05
PTPN4-207ENST00000460162 HERC5Q9UII4 1024 aaKnown RBP27.87■■■□□ 2.05
PTPN4-207ENST00000460162 BCRP11274 1271 aa27.86■■■□□ 2.05
PTPN4-207ENST00000460162 GADL1Q6ZQY3 521 aa27.86■■■□□ 2.05
PTPN4-207ENST00000460162 TMEM106CQ9BVX2 250 aa27.86■■■□□ 2.05
PTPN4-207ENST00000460162 TBC1D2Q9BYX2 928 aa27.86■■■□□ 2.05
PTPN4-207ENST00000460162 TRIM75PA6NK02 468 aa27.85■■■□□ 2.05
PTPN4-207ENST00000460162 CYP2C8P10632 490 aa27.85■■■□□ 2.05
PTPN4-207ENST00000460162 PSMC4P43686 418 aa27.85■■■□□ 2.05
PTPN4-207ENST00000460162 ADGRA1Q86SQ6 560 aa27.85■■■□□ 2.05
PTPN4-207ENST00000460162 TRIM47Q96LD4 638 aa27.85■■■□□ 2.05
PTPN4-207ENST00000460162 CCDC8Q9H0W5 538 aaPredicted RBP27.85■■■□□ 2.05
PTPN4-207ENST00000460162 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.85■■■□□ 2.05
PTPN4-207ENST00000460162 HOXD10P28358 340 aa27.84■■■□□ 2.05
PTPN4-207ENST00000460162 CTGFP29279 349 aa27.84■■■□□ 2.05
PTPN4-207ENST00000460162 HSP90AB4PQ58FF6 505 aa27.84■■■□□ 2.05
PTPN4-207ENST00000460162 PIH1D3Q9NQM4 214 aaKnown RBP27.84■■■□□ 2.05
PTPN4-207ENST00000460162 PI4KBQ9UBF8 816 aa27.84■■■□□ 2.05
PTPN4-207ENST00000460162 SRRDQ9UH36 339 aa27.84■■■□□ 2.05
PTPN4-207ENST00000460162 EXOC6BQ9Y2D4 811 aa27.84■■■□□ 2.05
PTPN4-207ENST00000460162 FLT1P17948 1338 aa27.84■■■□□ 2.05
PTPN4-207ENST00000460162 MKI67P46013 3256 aaKnown RBP27.83■■■□□ 2.05
PTPN4-207ENST00000460162 AGTPBP1Q9UPW5 1226 aa27.83■■■□□ 2.05
PTPN4-207ENST00000460162 OSBPP22059 807 aa27.82■■■□□ 2.04
PTPN4-207ENST00000460162 CAP2P40123 477 aa27.82■■■□□ 2.04
PTPN4-207ENST00000460162 CCDC84Q86UT8 332 aaPredicted RBP27.82■■■□□ 2.04
PTPN4-207ENST00000460162 FMNL1O95466 1100 aaPredicted RBP27.81■■■□□ 2.04
PTPN4-207ENST00000460162 TMED8Q6PL24 325 aaPredicted RBP27.81■■■□□ 2.04
PTPN4-207ENST00000460162 AACSQ86V21 672 aa27.81■■■□□ 2.04
PTPN4-207ENST00000460162 CERS3Q8IU89 383 aa27.81■■■□□ 2.04
PTPN4-207ENST00000460162 MAPKAPK5Q8IW41 473 aa27.81■■■□□ 2.04
PTPN4-207ENST00000460162 PROCA1Q8NCQ7 364 aaPredicted RBP27.81■■■□□ 2.04
PTPN4-207ENST00000460162 SH3TC2Q8TF17 1288 aa27.81■■■□□ 2.04
PTPN4-207ENST00000460162 TGFBRAP1Q8WUH2 860 aa27.81■■■□□ 2.04
PTPN4-207ENST00000460162 DDX19BQ9UMR2 479 aa27.81■■■□□ 2.04
PTPN4-207ENST00000460162 MYPNQ86TC9 1320 aa27.81■■■□□ 2.04
PTPN4-207ENST00000460162 ECM2O94769 699 aaPredicted RBP27.8■■■□□ 2.04
PTPN4-207ENST00000460162 FCGRTP55899 365 aa27.8■■■□□ 2.04
PTPN4-207ENST00000460162 ZNF280CQ8ND82 737 aa27.8■■■□□ 2.04
PTPN4-207ENST00000460162 SMCR8Q8TEV9 937 aaPredicted RBP27.8■■■□□ 2.04
PTPN4-207ENST00000460162 PNMA3Q9UL41 463 aa27.8■■■□□ 2.04
PTPN4-207ENST00000460162 MYH1P12882 1939 aa27.8■■■□□ 2.04
PTPN4-207ENST00000460162 IDH1O75874 414 aaKnown RBP27.79■■■□□ 2.04
PTPN4-207ENST00000460162 SLC34A2O95436 690 aa27.79■■■□□ 2.04
PTPN4-207ENST00000460162 EN2P19622 333 aaPredicted RBP27.79■■■□□ 2.04
PTPN4-207ENST00000460162 USP17L5A8MUK1 530 aa27.78■■■□□ 2.04
PTPN4-207ENST00000460162 CYP7A1P22680 504 aa27.78■■■□□ 2.04
PTPN4-207ENST00000460162 RRP1BQ14684 758 aaKnown RBP27.78■■■□□ 2.04
PTPN4-207ENST00000460162 SLC4A8Q2Y0W8 1093 aa27.78■■■□□ 2.04
PTPN4-207ENST00000460162 METTL16Q86W50 562 aaKnown RBP27.78■■■□□ 2.04
PTPN4-207ENST00000460162 RPAP2Q8IXW5 612 aaPredicted RBP27.78■■■□□ 2.04
PTPN4-207ENST00000460162 RAET1EQ8TD07 263 aa27.78■■■□□ 2.04
PTPN4-207ENST00000460162 AS3MTQ9HBK9 375 aa27.78■■■□□ 2.04
PTPN4-207ENST00000460162 HMMRO75330 724 aa27.77■■■□□ 2.04
PTPN4-207ENST00000460162 SPP2Q13103 211 aa27.77■■■□□ 2.04
PTPN4-207ENST00000460162 RHPN1Q8TCX5 695 aa27.77■■■□□ 2.04
PTPN4-207ENST00000460162 DNAJC18Q9H819 358 aa27.77■■■□□ 2.04
PTPN4-207ENST00000460162 DDX60LQ5H9U9 1706 aaKnown RBP27.77■■■□□ 2.04
PTPN4-207ENST00000460162 ASNSP08243 561 aa27.76■■■□□ 2.03
PTPN4-207ENST00000460162 MAP3K12Q12852 859 aa27.76■■■□□ 2.03
PTPN4-207ENST00000460162 TREML2Q5T2D2 321 aa27.76■■■□□ 2.03
PTPN4-207ENST00000460162 FOXP4Q8IVH2 680 aaPredicted RBP27.76■■■□□ 2.03
PTPN4-207ENST00000460162 CRACR2BQ8N4Y2 399 aaPredicted RBP27.76■■■□□ 2.03
PTPN4-207ENST00000460162 HLA-DOAP06340 250 aa27.75■■■□□ 2.03
PTPN4-207ENST00000460162 GRK4P32298 578 aa27.75■■■□□ 2.03
PTPN4-207ENST00000460162 DYNLL1P63167 89 aaKnown RBP27.75■■■□□ 2.03
PTPN4-207ENST00000460162 PRKCZQ05513 592 aa27.75■■■□□ 2.03
PTPN4-207ENST00000460162 MAGEB6Q8N7X4 407 aa27.75■■■□□ 2.03
PTPN4-207ENST00000460162 KIF1BPQ96EK5 621 aa27.75■■■□□ 2.03
PTPN4-207ENST00000460162 TRIM34Q9BYJ4 488 aa27.75■■■□□ 2.03
PTPN4-207ENST00000460162 CHMP4BQ9H444 224 aaKnown RBP27.75■■■□□ 2.03
PTPN4-207ENST00000460162 IL1RAPL2Q9NP60 686 aa27.75■■■□□ 2.03
PTPN4-207ENST00000460162 ZBTB40Q9NUA8 1239 aa27.75■■■□□ 2.03
PTPN4-207ENST00000460162 PALD1Q9ULE6 856 aa27.75■■■□□ 2.03
PTPN4-207ENST00000460162 COG6Q9Y2V7 657 aa27.75■■■□□ 2.03
PTPN4-207ENST00000460162 NAV1Q8NEY1 1877 aa27.74■■■□□ 2.03
PTPN4-207ENST00000460162 HMGCS2P54868 508 aa27.74■■■□□ 2.03
PTPN4-207ENST00000460162 PABPC4Q13310 644 aaKnown RBP eCLIP27.74■■■□□ 2.03
PTPN4-207ENST00000460162 SH3D19Q5HYK7 790 aa27.74■■■□□ 2.03
PTPN4-207ENST00000460162 ANTXR1Q9H6X2 564 aa27.74■■■□□ 2.03
PTPN4-207ENST00000460162 GINM1Q9NU53 330 aa27.74■■■□□ 2.03
PTPN4-207ENST00000460162 RCAN3Q9UKA8 241 aa27.74■■■□□ 2.03
PTPN4-207ENST00000460162 NDUFB9Q9Y6M9 179 aa27.74■■■□□ 2.03
PTPN4-207ENST00000460162 MYCP01106 439 aaPredicted RBP27.73■■■□□ 2.03
PTPN4-207ENST00000460162 FAM110CQ1W6H9 321 aa27.73■■■□□ 2.03
PTPN4-207ENST00000460162 CLASRPQ8N2M8 674 aaKnown RBP27.73■■■□□ 2.03
PTPN4-207ENST00000460162 WDR18Q9BV38 432 aa27.73■■■□□ 2.03
PTPN4-207ENST00000460162 TTF1Q15361 905 aaPredicted RBP27.72■■■□□ 2.03
PTPN4-207ENST00000460162 MIGA1Q8NAN2 632 aa27.72■■■□□ 2.03
PTPN4-207ENST00000460162 SLAIN1Q8ND83 568 aa27.72■■■□□ 2.03
PTPN4-207ENST00000460162 SAP30BPQ9UHR5 308 aaKnown RBP27.72■■■□□ 2.03
PTPN4-207ENST00000460162 TNPO2O14787 897 aaKnown RBP27.71■■■□□ 2.03
PTPN4-207ENST00000460162 ANKRD13CQ8N6S4 541 aa27.71■■■□□ 2.03
PTPN4-207ENST00000460162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.71■■■□□ 2.03
PTPN4-207ENST00000460162 USP5P45974 858 aa27.7■■■□□ 2.02
PTPN4-207ENST00000460162 GCLCP48506 637 aaPredicted RBP27.7■■■□□ 2.02
PTPN4-207ENST00000460162 MTMR2Q13614 643 aa27.7■■■□□ 2.02
PTPN4-207ENST00000460162 SIRT2Q8IXJ6 389 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms