RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 CYP4F12Q9HCS2 524 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 SUPT16HQ9Y5B9 1047 aaKnown RBP5.41□□□□□ -1.54
VPS8-215ENST00000460158 PCDHGC5Q9Y5F6 944 aa5.41□□□□□ -1.54
VPS8-215ENST00000460158 DCDC2CA8MYV0 355 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 TLR3O15455 904 aaKnown RBP5.4□□□□□ -1.54
VPS8-215ENST00000460158 TIAF1O95411 115 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 ADH5P11766 374 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 CRKP46108 304 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 PREPP48147 710 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 SOX4Q06945 474 aaPredicted RBP5.4□□□□□ -1.54
VPS8-215ENST00000460158 PAK2Q13177 524 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 ZC3H12AQ5D1E8 599 aaKnown RBP5.4□□□□□ -1.54
VPS8-215ENST00000460158 LRFN4Q6PJG9 635 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 FAM196AQ6ZSG2 479 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 KIAA0825Q8IV33 1275 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 KCNF1Q9H3M0 494 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 UBP1Q9NZI7 540 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 CSADQ9Y600 493 aa5.4□□□□□ -1.54
VPS8-215ENST00000460158 TTBK1Q5TCY1 1321 aaPredicted RBP5.4□□□□□ -1.55
VPS8-215ENST00000460158 SYNGAP1Q96PV0 1343 aa5.4□□□□□ -1.55
VPS8-215ENST00000460158 TMPRSS2O15393 492 aa5.39□□□□□ -1.55
VPS8-215ENST00000460158 CILPO75339 1184 aa5.39□□□□□ -1.55
VPS8-215ENST00000460158 HNRNPUQ00839 825 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS8-215ENST00000460158 ID3Q02535 119 aa5.39□□□□□ -1.55
VPS8-215ENST00000460158 CPSF6Q16630 551 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS8-215ENST00000460158 WIPI1Q5MNZ9 446 aaPredicted RBP5.39□□□□□ -1.55
VPS8-215ENST00000460158 DYMQ7RTS9 669 aa5.39□□□□□ -1.55
VPS8-215ENST00000460158 C12orf40Q86WS4 652 aa5.39□□□□□ -1.55
VPS8-215ENST00000460158 C2CD4AQ8NCU7 369 aaPredicted RBP5.39□□□□□ -1.55
VPS8-215ENST00000460158 GIMAP7Q8NHV1 300 aa5.39□□□□□ -1.55
VPS8-215ENST00000460158 PLPPR2Q96GM1 343 aa5.39□□□□□ -1.55
VPS8-215ENST00000460158 CRIM1Q9NZV1 1036 aa5.39□□□□□ -1.55
VPS8-215ENST00000460158 AP4E1Q9UPM8 1137 aa5.39□□□□□ -1.55
VPS8-215ENST00000460158 GFRA2O00451 464 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 RPL6Q02878 288 aaKnown RBP5.38□□□□□ -1.55
VPS8-215ENST00000460158 MPP2Q14168 576 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 PPM1JQ5JR12 505 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 ELMO3Q96BJ8 720 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 FANCD2OSQ96PS1 177 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 NT5C1AQ9BXI3 368 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 CAPN10Q9HC96 672 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 DISC1Q9NRI5 854 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 PIM2Q9P1W9 311 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 ADGRE2Q9UHX3 823 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 INPP5FQ9Y2H2 1132 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 ACTL7BQ9Y614 415 aa5.38□□□□□ -1.55
VPS8-215ENST00000460158 WDR64B1ANS9 1081 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 GAS2O43903 313 aaKnown RBP5.37□□□□□ -1.55
VPS8-215ENST00000460158 BPNT1O95861 308 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 MAP4P27816 1152 aaKnown RBP5.37□□□□□ -1.55
VPS8-215ENST00000460158 GJA8P48165 433 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 RING1Q06587 406 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 APOBRQ0VD83 1088 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 SEZ6Q53EL9 994 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 CYFIP1Q7L576 1253 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 HDXQ7Z353 690 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 TINF2Q9BSI4 451 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 LRRC3Q9BY71 257 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 GSX1Q9H4S2 264 aaPredicted RBP5.37□□□□□ -1.55
VPS8-215ENST00000460158 FAM105AQ9NUU6 356 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 SNCAIPQ9Y6H5 919 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 ROBO2Q9HCK4 1378 aa5.37□□□□□ -1.55
VPS8-215ENST00000460158 PRAMEF27A3QJZ7 478 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 HCLS1P14317 486 aaPredicted RBP5.36□□□□□ -1.55
VPS8-215ENST00000460158 ASPAP45381 313 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 ZC3H6P61129 1189 aaKnown RBP5.36□□□□□ -1.55
VPS8-215ENST00000460158 ERVK-24P63145 666 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 TTLL4Q14679 1199 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 NAALADL2Q58DX5 795 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 DIEXFQ68CQ4 756 aaKnown RBP5.36□□□□□ -1.55
VPS8-215ENST00000460158 CDPF1Q6NVV7 123 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 REC114Q7Z4M0 266 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 NKD1Q969G9 470 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 GPRASP2Q96D09 838 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 MFSD14AQ96MC6 490 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 ATXN3LQ9H3M9 355 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 BRMS1Q9HCU9 246 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 ATG3Q9NT62 314 aa5.36□□□□□ -1.55
VPS8-215ENST00000460158 POLR3KQ9Y2Y1 108 aaPredicted RBP5.36□□□□□ -1.55
VPS8-215ENST00000460158 GRIN3BO60391 1043 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 NEFMP07197 916 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 FOSL1P15407 271 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 NTF4P34130 210 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 USP11P51784 963 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 CWF19L2Q2TBE0 894 aaKnown RBP5.35□□□□□ -1.55
VPS8-215ENST00000460158 SGO2Q562F6 1265 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 SLITRK4Q8IW52 837 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 RNF214Q8ND24 703 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 RASGRP4Q8TDF6 673 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 FBLIM1Q8WUP2 373 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 PICK1Q9NRD5 415 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 ANGEL1Q9UNK9 670 aaKnown RBP5.35□□□□□ -1.55
VPS8-215ENST00000460158 LEMD3Q9Y2U8 911 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 CORINQ9Y5Q5 1042 aa5.35□□□□□ -1.55
VPS8-215ENST00000460158 RNGTTO60942 597 aaKnown RBP5.34□□□□□ -1.55
VPS8-215ENST00000460158 RAB6AP20340 208 aa5.34□□□□□ -1.55
VPS8-215ENST00000460158 HOXA10P31260 410 aaPredicted RBP5.34□□□□□ -1.55
VPS8-215ENST00000460158 GRK4P32298 578 aa5.34□□□□□ -1.55
VPS8-215ENST00000460158 MCM4P33991 863 aa5.34□□□□□ -1.55
VPS8-215ENST00000460158 MSMPQ1L6U9 139 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms