RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 MIGA1Q8NAN2 632 aa20.05■□□□□ 0.8
SHANK2-213ENST00000460048 PI4KBQ9UBF8 816 aa20.05■□□□□ 0.8
SHANK2-213ENST00000460048 HERC5Q9UII4 1024 aaKnown RBP20.05■□□□□ 0.8
SHANK2-213ENST00000460048 AFG3L2Q9Y4W6 797 aa20.05■□□□□ 0.8
SHANK2-213ENST00000460048 ZHX2Q9Y6X8 837 aa20.05■□□□□ 0.8
SHANK2-213ENST00000460048 NAV1Q8NEY1 1877 aa20.05■□□□□ 0.8
SHANK2-213ENST00000460048 GOLIM4O00461 696 aa20.04■□□□□ 0.8
SHANK2-213ENST00000460048 SP3Q02447 781 aa20.04■□□□□ 0.8
SHANK2-213ENST00000460048 METTL16Q86W50 562 aaKnown RBP20.04■□□□□ 0.8
SHANK2-213ENST00000460048 ERO1AQ96HE7 468 aa20.04■□□□□ 0.8
SHANK2-213ENST00000460048 DNAJC2Q99543 621 aaKnown RBP20.04■□□□□ 0.8
SHANK2-213ENST00000460048 BCL11AQ9H165 835 aa20.04■□□□□ 0.8
SHANK2-213ENST00000460048 PCDHB15Q9Y5E8 787 aa20.04■□□□□ 0.8
SHANK2-213ENST00000460048 ZSWIM8A7E2V4 1837 aa20.04■□□□□ 0.8
SHANK2-213ENST00000460048 A0A0G2JLL6 359 aaPredicted RBP20.03■□□□□ 0.8
SHANK2-213ENST00000460048 TLR2O60603 784 aa20.03■□□□□ 0.8
SHANK2-213ENST00000460048 RRP1BQ14684 758 aaKnown RBP20.03■□□□□ 0.8
SHANK2-213ENST00000460048 FBXO46Q6PJ61 603 aaPredicted RBP20.03■□□□□ 0.8
SHANK2-213ENST00000460048 PRRT2Q7Z6L0 340 aaPredicted RBP20.03■□□□□ 0.8
SHANK2-213ENST00000460048 CD99L2Q8TCZ2 262 aa20.03■□□□□ 0.8
SHANK2-213ENST00000460048 EDC3Q96F86 508 aaKnown RBP20.03■□□□□ 0.8
SHANK2-213ENST00000460048 RIOK1Q9BRS2 568 aaKnown RBP20.03■□□□□ 0.8
SHANK2-213ENST00000460048 BOLA2Q9H3K6 86 aa20.03■□□□□ 0.8
SHANK2-213ENST00000460048 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.03■□□□□ 0.8
SHANK2-213ENST00000460048 PALD1Q9ULE6 856 aa20.03■□□□□ 0.8
SHANK2-213ENST00000460048 LOC285556D6RIA3 1793 aa20.03■□□□□ 0.8
SHANK2-213ENST00000460048 TCRBV5S4A2TA0A5A2 114 aa20.02■□□□□ 0.8
SHANK2-213ENST00000460048 PDE6AP16499 860 aa20.02■□□□□ 0.8
SHANK2-213ENST00000460048 CAP2P40123 477 aa20.02■□□□□ 0.8
SHANK2-213ENST00000460048 CAP1Q01518 475 aa20.02■□□□□ 0.8
SHANK2-213ENST00000460048 SLC9C2Q5TAH2 1124 aa20.02■□□□□ 0.8
SHANK2-213ENST00000460048 GPAT2Q6NUI2 795 aa20.02■□□□□ 0.8
SHANK2-213ENST00000460048 OTOP1Q7RTM1 612 aa20.02■□□□□ 0.8
SHANK2-213ENST00000460048 FOXP4Q8IVH2 680 aaPredicted RBP20.02■□□□□ 0.8
SHANK2-213ENST00000460048 HAUS7Q99871 368 aa20.02■□□□□ 0.8
SHANK2-213ENST00000460048 DNAJC18Q9H819 358 aa20.02■□□□□ 0.8
SHANK2-213ENST00000460048 PAG1Q9NWQ8 432 aa20.02■□□□□ 0.8
SHANK2-213ENST00000460048 HPS5Q9UPZ3 1129 aa20.02■□□□□ 0.8
SHANK2-213ENST00000460048 PDHXO00330 501 aa20.01■□□□□ 0.79
SHANK2-213ENST00000460048 TRIM17Q9Y577 477 aa20.01■□□□□ 0.79
SHANK2-213ENST00000460048 ADGRA2Q96PE1 1338 aa20.01■□□□□ 0.79
SHANK2-213ENST00000460048 ZNF532Q9HCE3 1301 aa20.01■□□□□ 0.79
SHANK2-213ENST00000460048 CCDC84Q86UT8 332 aaPredicted RBP20■□□□□ 0.79
SHANK2-213ENST00000460048 CRBNQ96SW2 442 aa20■□□□□ 0.79
SHANK2-213ENST00000460048 SAP30BPQ9UHR5 308 aaKnown RBP20■□□□□ 0.79
SHANK2-213ENST00000460048 MGAMO43451 1857 aa20■□□□□ 0.79
SHANK2-213ENST00000460048 MAGEB6P1A0A0J9YX57 407 aa19.99■□□□□ 0.79
SHANK2-213ENST00000460048 USP5P45974 858 aa19.99■□□□□ 0.79
SHANK2-213ENST00000460048 RGS19P49795 217 aa19.99■□□□□ 0.79
SHANK2-213ENST00000460048 C17orf99Q6UX52 265 aa19.99■□□□□ 0.79
SHANK2-213ENST00000460048 FASTKD5Q7L8L6 764 aaKnown RBP19.99■□□□□ 0.79
SHANK2-213ENST00000460048 BAZ2AQ9UIF9 1905 aaKnown RBP19.98■□□□□ 0.79
SHANK2-213ENST00000460048 HLA-DOAP06340 250 aa19.98■□□□□ 0.79
SHANK2-213ENST00000460048 ADD2P35612 726 aa19.98■□□□□ 0.79
SHANK2-213ENST00000460048 TBC1D2Q9BYX2 928 aa19.98■□□□□ 0.79
SHANK2-213ENST00000460048 EFCC1Q9HA90 598 aa19.98■□□□□ 0.79
SHANK2-213ENST00000460048 ECHDC1Q9NTX5 307 aa19.98■□□□□ 0.79
SHANK2-213ENST00000460048 TRIM75PA6NK02 468 aa19.97■□□□□ 0.79
SHANK2-213ENST00000460048 JAG1P78504 1218 aa19.97■□□□□ 0.79
SHANK2-213ENST00000460048 CRACR2BQ8N4Y2 399 aaPredicted RBP19.97■□□□□ 0.79
SHANK2-213ENST00000460048 PTPN22Q9Y2R2 807 aa19.97■□□□□ 0.79
SHANK2-213ENST00000460048 SLC45A1Q9Y2W3 748 aa19.97■□□□□ 0.79
SHANK2-213ENST00000460048 MYH8P13535 1937 aa19.97■□□□□ 0.79
SHANK2-213ENST00000460048 USP17L5A8MUK1 530 aa19.96■□□□□ 0.79
SHANK2-213ENST00000460048 SPP2Q13103 211 aa19.96■□□□□ 0.79
SHANK2-213ENST00000460048 SLC4A8Q2Y0W8 1093 aa19.96■□□□□ 0.79
SHANK2-213ENST00000460048 GADL1Q6ZQY3 521 aa19.96■□□□□ 0.79
SHANK2-213ENST00000460048 ZNF280CQ8ND82 737 aa19.96■□□□□ 0.79
SHANK2-213ENST00000460048 CRNKL1Q9BZJ0 848 aaKnown RBP19.96■□□□□ 0.79
SHANK2-213ENST00000460048 EHD4Q9H223 541 aa19.96■□□□□ 0.79
SHANK2-213ENST00000460048 HTTP42858 3142 aa19.96■□□□□ 0.79
SHANK2-213ENST00000460048 ASNSP08243 561 aa19.95■□□□□ 0.78
SHANK2-213ENST00000460048 LACTBP83111 547 aaPredicted RBP19.95■□□□□ 0.78
SHANK2-213ENST00000460048 SLFNL1Q499Z3 407 aa19.95■□□□□ 0.78
SHANK2-213ENST00000460048 TTC6Q86TZ1 520 aa19.95■□□□□ 0.78
SHANK2-213ENST00000460048 LCORLQ8N3X6 602 aa19.95■□□□□ 0.78
SHANK2-213ENST00000460048 PARK7Q99497 189 aaKnown RBP19.95■□□□□ 0.78
SHANK2-213ENST00000460048 TRIM34Q9BYJ4 488 aa19.95■□□□□ 0.78
SHANK2-213ENST00000460048 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.95■□□□□ 0.78
SHANK2-213ENST00000460048 GINM1Q9NU53 330 aa19.95■□□□□ 0.78
SHANK2-213ENST00000460048 CPA4Q9UI42 421 aa19.95■□□□□ 0.78
SHANK2-213ENST00000460048 CHGBP05060 677 aa19.94■□□□□ 0.78
SHANK2-213ENST00000460048 CYP2C8P10632 490 aa19.94■□□□□ 0.78
SHANK2-213ENST00000460048 ARHGEF6Q15052 776 aa19.94■□□□□ 0.78
SHANK2-213ENST00000460048 UBE3CQ15386 1083 aa19.94■□□□□ 0.78
SHANK2-213ENST00000460048 SHROOM1Q2M3G4 852 aaPredicted RBP19.94■□□□□ 0.78
SHANK2-213ENST00000460048 SH3D19Q5HYK7 790 aa19.94■□□□□ 0.78
SHANK2-213ENST00000460048 TATDN1Q6P1N9 297 aa19.94■□□□□ 0.78
SHANK2-213ENST00000460048 PROCA1Q8NCQ7 364 aaPredicted RBP19.94■□□□□ 0.78
SHANK2-213ENST00000460048 WDR18Q9BV38 432 aa19.94■□□□□ 0.78
SHANK2-213ENST00000460048 AS3MTQ9HBK9 375 aa19.94■□□□□ 0.78
SHANK2-213ENST00000460048 SERPINB13Q9UIV8 391 aa19.94■□□□□ 0.78
SHANK2-213ENST00000460048 AGTPBP1Q9UPW5 1226 aa19.94■□□□□ 0.78
SHANK2-213ENST00000460048 RBBP6Q7Z6E9 1792 aaKnown RBP19.93■□□□□ 0.78
SHANK2-213ENST00000460048 GDF11O95390 407 aa19.93■□□□□ 0.78
SHANK2-213ENST00000460048 BCRP11274 1271 aa19.93■□□□□ 0.78
SHANK2-213ENST00000460048 PLCD1P51178 756 aa19.93■□□□□ 0.78
SHANK2-213ENST00000460048 SDR42E1Q8WUS8 393 aa19.93■□□□□ 0.78
SHANK2-213ENST00000460048 GPATCH3Q96I76 525 aa19.93■□□□□ 0.78
SHANK2-213ENST00000460048 ARHGAP39Q9C0H5 1083 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms