RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 BCL11AQ9H165 835 aa25.47■■□□□ 1.67
SRM-202ENST00000459997 DHX36Q9H2U1 1008 aaKnown RBP25.47■■□□□ 1.67
SRM-202ENST00000459997 ANTXR1Q9H6X2 564 aa25.47■■□□□ 1.67
SRM-202ENST00000459997 ZSWIM8A7E2V4 1837 aa25.47■■□□□ 1.67
SRM-202ENST00000459997 DYNLL1P63167 89 aaKnown RBP25.46■■□□□ 1.67
SRM-202ENST00000459997 LACTBP83111 547 aaPredicted RBP25.46■■□□□ 1.67
SRM-202ENST00000459997 GPAT2Q6NUI2 795 aa25.46■■□□□ 1.67
SRM-202ENST00000459997 FASTKD5Q7L8L6 764 aaKnown RBP25.46■■□□□ 1.67
SRM-202ENST00000459997 CCDC84Q86UT8 332 aaPredicted RBP25.46■■□□□ 1.67
SRM-202ENST00000459997 MAGEB6Q8N7X4 407 aa25.46■■□□□ 1.67
SRM-202ENST00000459997 PI4KBQ9UBF8 816 aa25.46■■□□□ 1.67
SRM-202ENST00000459997 CPA4Q9UI42 421 aa25.46■■□□□ 1.67
SRM-202ENST00000459997 HERC5Q9UII4 1024 aaKnown RBP25.46■■□□□ 1.67
SRM-202ENST00000459997 SIPA1L1O43166 1804 aa25.46■■□□□ 1.67
SRM-202ENST00000459997 ATAD5Q96QE3 1844 aa25.46■■□□□ 1.67
SRM-202ENST00000459997 TNRC18O15417 2968 aaPredicted RBP25.46■■□□□ 1.67
SRM-202ENST00000459997 PTPRFP10586 1907 aa25.45■■□□□ 1.67
SRM-202ENST00000459997 TRIM75PA6NK02 468 aa25.45■■□□□ 1.66
SRM-202ENST00000459997 RAB11FIP3O75154 756 aa25.45■■□□□ 1.66
SRM-202ENST00000459997 IFIT2P09913 472 aaKnown RBP25.45■■□□□ 1.66
SRM-202ENST00000459997 MAP3K12Q12852 859 aa25.45■■□□□ 1.66
SRM-202ENST00000459997 C17orf99Q6UX52 265 aa25.45■■□□□ 1.66
SRM-202ENST00000459997 GADL1Q6ZQY3 521 aa25.45■■□□□ 1.66
SRM-202ENST00000459997 YTHDC1Q96MU7 727 aaKnown RBP25.45■■□□□ 1.66
SRM-202ENST00000459997 PARK7Q99497 189 aaKnown RBP25.45■■□□□ 1.66
SRM-202ENST00000459997 ARHGAP39Q9C0H5 1083 aa25.45■■□□□ 1.66
SRM-202ENST00000459997 ADGRA2Q96PE1 1338 aa25.44■■□□□ 1.66
SRM-202ENST00000459997 MIGA1Q8NAN2 632 aa25.44■■□□□ 1.66
SRM-202ENST00000459997 ECM2O94769 699 aaPredicted RBP25.42■■□□□ 1.66
SRM-202ENST00000459997 CYP2C8P10632 490 aa25.42■■□□□ 1.66
SRM-202ENST00000459997 CAP2P40123 477 aa25.42■■□□□ 1.66
SRM-202ENST00000459997 RRP1BQ14684 758 aaKnown RBP25.42■■□□□ 1.66
SRM-202ENST00000459997 TTF1Q15361 905 aaPredicted RBP25.42■■□□□ 1.66
SRM-202ENST00000459997 CERS3Q8IU89 383 aa25.42■■□□□ 1.66
SRM-202ENST00000459997 SAP30BPQ9UHR5 308 aaKnown RBP25.42■■□□□ 1.66
SRM-202ENST00000459997 PALD1Q9ULE6 856 aa25.42■■□□□ 1.66
SRM-202ENST00000459997 TMED8Q6PL24 325 aaPredicted RBP25.41■■□□□ 1.66
SRM-202ENST00000459997 CRACR2BQ8N4Y2 399 aaPredicted RBP25.41■■□□□ 1.66
SRM-202ENST00000459997 TRIM34Q9BYJ4 488 aa25.41■■□□□ 1.66
SRM-202ENST00000459997 PTCH2Q9Y6C5 1203 aa25.41■■□□□ 1.66
SRM-202ENST00000459997 ARMC5Q96C12 935 aa25.4■■□□□ 1.66
SRM-202ENST00000459997 DNAJC2Q99543 621 aaKnown RBP25.4■■□□□ 1.66
SRM-202ENST00000459997 GNRH1P01148 92 aa25.39■■□□□ 1.66
SRM-202ENST00000459997 HLA-DOAP06340 250 aa25.39■■□□□ 1.66
SRM-202ENST00000459997 USP5P45974 858 aa25.39■■□□□ 1.66
SRM-202ENST00000459997 SPP2Q13103 211 aa25.39■■□□□ 1.66
SRM-202ENST00000459997 SLC4A8Q2Y0W8 1093 aa25.39■■□□□ 1.66
SRM-202ENST00000459997 FOXP4Q8IVH2 680 aaPredicted RBP25.39■■□□□ 1.66
SRM-202ENST00000459997 ZNF280CQ8ND82 737 aa25.39■■□□□ 1.66
SRM-202ENST00000459997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.39■■□□□ 1.66
SRM-202ENST00000459997 TBC1D2Q9BYX2 928 aa25.39■■□□□ 1.66
SRM-202ENST00000459997 DNAJC18Q9H819 358 aa25.39■■□□□ 1.66
SRM-202ENST00000459997 SLC45A1Q9Y2W3 748 aa25.39■■□□□ 1.66
SRM-202ENST00000459997 USP17L5A8MUK1 530 aa25.38■■□□□ 1.65
SRM-202ENST00000459997 GOLIM4O00461 696 aa25.38■■□□□ 1.65
SRM-202ENST00000459997 PSMC4P43686 418 aa25.38■■□□□ 1.65
SRM-202ENST00000459997 SLC9C1Q4G0N8 1177 aa25.38■■□□□ 1.65
SRM-202ENST00000459997 METTL16Q86W50 562 aaKnown RBP25.38■■□□□ 1.65
SRM-202ENST00000459997 AGTPBP1Q9UPW5 1226 aa25.38■■□□□ 1.65
SRM-202ENST00000459997 LOC285556D6RIA3 1793 aa25.38■■□□□ 1.65
SRM-202ENST00000459997 MYH1P12882 1939 aa25.37■■□□□ 1.65
SRM-202ENST00000459997 BCRP11274 1271 aa25.37■■□□□ 1.65
SRM-202ENST00000459997 CTGFP29279 349 aa25.37■■□□□ 1.65
SRM-202ENST00000459997 SLC9C2Q5TAH2 1124 aa25.37■■□□□ 1.65
SRM-202ENST00000459997 TRIM47Q96LD4 638 aa25.37■■□□□ 1.65
SRM-202ENST00000459997 CENPFP49454 3210 aa25.37■■□□□ 1.65
SRM-202ENST00000459997 FMNL1O95466 1100 aaPredicted RBP25.36■■□□□ 1.65
SRM-202ENST00000459997 PDE6AP16499 860 aa25.36■■□□□ 1.65
SRM-202ENST00000459997 TREML2Q5T2D2 321 aa25.36■■□□□ 1.65
SRM-202ENST00000459997 PROCA1Q8NCQ7 364 aaPredicted RBP25.36■■□□□ 1.65
SRM-202ENST00000459997 AS3MTQ9HBK9 375 aa25.36■■□□□ 1.65
SRM-202ENST00000459997 RBBP6Q7Z6E9 1792 aaKnown RBP25.36■■□□□ 1.65
SRM-202ENST00000459997 MAGEB6P1A0A0J9YX57 407 aa25.35■■□□□ 1.65
SRM-202ENST00000459997 POTEFA5A3E0 1075 aa25.35■■□□□ 1.65
SRM-202ENST00000459997 ASNSP08243 561 aa25.35■■□□□ 1.65
SRM-202ENST00000459997 HMGCS2P54868 508 aa25.35■■□□□ 1.65
SRM-202ENST00000459997 PRMT2P55345 433 aa25.35■■□□□ 1.65
SRM-202ENST00000459997 NBPF11Q86T75 865 aa25.35■■□□□ 1.65
SRM-202ENST00000459997 SMCR8Q8TEV9 937 aaPredicted RBP25.35■■□□□ 1.65
SRM-202ENST00000459997 EDC3Q96F86 508 aaKnown RBP25.35■■□□□ 1.65
SRM-202ENST00000459997 ZNF333Q96JL9 665 aa25.35■■□□□ 1.65
SRM-202ENST00000459997 RIOK1Q9BRS2 568 aaKnown RBP25.35■■□□□ 1.65
SRM-202ENST00000459997 LRRCC1Q9C099 1032 aa25.35■■□□□ 1.65
SRM-202ENST00000459997 GDF11O95390 407 aa25.34■■□□□ 1.65
SRM-202ENST00000459997 JAG1P78504 1218 aa25.34■■□□□ 1.65
SRM-202ENST00000459997 BOLA2Q9H3K6 86 aa25.34■■□□□ 1.65
SRM-202ENST00000459997 ZNF532Q9HCE3 1301 aa25.34■■□□□ 1.65
SRM-202ENST00000459997 ATP5JP18859 108 aa25.33■■□□□ 1.65
SRM-202ENST00000459997 OSBPP22059 807 aa25.33■■□□□ 1.65
SRM-202ENST00000459997 HOXD10P28358 340 aa25.33■■□□□ 1.65
SRM-202ENST00000459997 SHROOM1Q2M3G4 852 aaPredicted RBP25.33■■□□□ 1.65
SRM-202ENST00000459997 PAG1Q9NWQ8 432 aa25.33■■□□□ 1.65
SRM-202ENST00000459997 SRRDQ9UH36 339 aa25.33■■□□□ 1.65
SRM-202ENST00000459997 PNMA3Q9UL41 463 aa25.33■■□□□ 1.65
SRM-202ENST00000459997 MGAMO43451 1857 aa25.32■■□□□ 1.64
SRM-202ENST00000459997 NAV1Q8NEY1 1877 aa25.32■■□□□ 1.64
SRM-202ENST00000459997 DDX60LQ5H9U9 1706 aaKnown RBP25.32■■□□□ 1.64
SRM-202ENST00000459997 SMARCA5O60264 1052 aaPredicted RBP25.32■■□□□ 1.64
SRM-202ENST00000459997 FCGRTP55899 365 aa25.32■■□□□ 1.64
SRM-202ENST00000459997 SH3TC2Q8TF17 1288 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms