RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	ANKRD13A	Q8IZ07	590 aa		12.37	□□□□□ -0.43
MRPL55-223	ENST00000459783	WNK4	Q96J92	1243 aa		12.37	□□□□□ -0.43
MRPL55-223	ENST00000459783	CCDC136	Q96JN2	1154 aa		12.37	□□□□□ -0.43
MRPL55-223	ENST00000459783	ZNF341	Q9BYN7	854 aa		12.37	□□□□□ -0.43
MRPL55-223	ENST00000459783	IL25	Q9H293	177 aa		12.37	□□□□□ -0.43
MRPL55-223	ENST00000459783	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.37	□□□□□ -0.43
MRPL55-223	ENST00000459783	GSG1L2	A8MUP6	293 aa		12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	TRIM6-TRIM34	B2RNG4	842 aa		12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	TBC1D12	O60347	775 aa		12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	SDS	P20132	328 aa		12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	KIF23	Q02241	960 aa	Predicted RBP	12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	NMI	Q13287	307 aa	Predicted RBP	12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	SPRYD7	Q5W111	196 aa		12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	DCAF15	Q66K64	600 aa		12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	CCDC84	Q86UT8	332 aa	Predicted RBP	12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	CERS3	Q8IU89	383 aa		12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	RILPL2	Q969X0	211 aa		12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	AIDA	Q96BJ3	306 aa		12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	SLC4A4	Q9Y6R1	1079 aa		12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	NAV1	Q8NEY1	1877 aa		12.36	□□□□□ -0.43
MRPL55-223	ENST00000459783	ECE1	P42892	770 aa		12.35	□□□□□ -0.43
MRPL55-223	ENST00000459783	GABPA	Q06546	454 aa		12.35	□□□□□ -0.43
MRPL55-223	ENST00000459783	NOL9	Q5SY16	702 aa	Known RBP	12.35	□□□□□ -0.43
MRPL55-223	ENST00000459783	VPS53	Q5VIR6	699 aa		12.35	□□□□□ -0.43
MRPL55-223	ENST00000459783	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.35	□□□□□ -0.43
MRPL55-223	ENST00000459783	CCDC102A	Q96A19	550 aa		12.35	□□□□□ -0.43
MRPL55-223	ENST00000459783	HOOK2	Q96ED9	719 aa		12.35	□□□□□ -0.43
MRPL55-223	ENST00000459783	SLC10A4	Q96EP9	437 aa		12.35	□□□□□ -0.43
MRPL55-223	ENST00000459783	DHX36	Q9H2U1	1008 aa	Known RBP	12.35	□□□□□ -0.43
MRPL55-223	ENST00000459783	PI4KB	Q9UBF8	816 aa		12.35	□□□□□ -0.43
MRPL55-223	ENST00000459783	SPDYE5	A6NIY4	337 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	UNCX	A6NJT0	531 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	USP17L12	C9JPN9	530 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	USP17L21	D6R901	530 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	SHMT1	P34896	483 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	MAP2K2	P36507	400 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	NOG	Q13253	232 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	CTR9	Q6PD62	1173 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	SLC44A5	Q8NCS7	719 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	OPTN	Q96CV9	577 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	DYNLL2	Q96FJ2	89 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	MS4A4A	Q96JQ5	239 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	ATP8A2	Q9NTI2	1148 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	MCM9	Q9NXL9	1143 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	PPP4R2	Q9NY27	417 aa		12.34	□□□□□ -0.43
MRPL55-223	ENST00000459783	C12orf60	Q5U649	245 aa		12.33	□□□□□ -0.44
MRPL55-223	ENST00000459783	ERICH6B	Q5W0A0	696 aa		12.33	□□□□□ -0.44
MRPL55-223	ENST00000459783	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.33	□□□□□ -0.44
MRPL55-223	ENST00000459783	SCYL3	Q8IZE3	742 aa		12.33	□□□□□ -0.44
MRPL55-223	ENST00000459783	OTUD5	Q96G74	571 aa		12.33	□□□□□ -0.44
MRPL55-223	ENST00000459783	EHD4	Q9H223	541 aa		12.33	□□□□□ -0.44
MRPL55-223	ENST00000459783	WBP1L	Q9NX94	342 aa		12.33	□□□□□ -0.44
MRPL55-223	ENST00000459783	HERC5	Q9UII4	1024 aa	Known RBP	12.33	□□□□□ -0.44
MRPL55-223	ENST00000459783	CSAD	Q9Y600	493 aa		12.33	□□□□□ -0.44
MRPL55-223	ENST00000459783	MYH1	P12882	1939 aa		12.33	□□□□□ -0.44
MRPL55-223	ENST00000459783	IRF6	O14896	467 aa		12.32	□□□□□ -0.44
MRPL55-223	ENST00000459783	CTNND1	O60716	968 aa	Known RBP	12.32	□□□□□ -0.44
MRPL55-223	ENST00000459783	PTPRA	P18433	802 aa		12.32	□□□□□ -0.44
MRPL55-223	ENST00000459783	CAP2	P40123	477 aa		12.32	□□□□□ -0.44
MRPL55-223	ENST00000459783	TATDN1	Q6P1N9	297 aa		12.32	□□□□□ -0.44
MRPL55-223	ENST00000459783	HELLS	Q9NRZ9	838 aa		12.32	□□□□□ -0.44
MRPL55-223	ENST00000459783	SERPINB13	Q9UIV8	391 aa		12.32	□□□□□ -0.44
MRPL55-223	ENST00000459783	TACC3	Q9Y6A5	838 aa		12.32	□□□□□ -0.44
MRPL55-223	ENST00000459783	AK9	Q5TCS8	1911 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	LAMB1	P07942	1786 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	GDF11	O95390	407 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	SLC34A2	O95436	690 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	POLR3D	P05423	398 aa	Predicted RBP	12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	HLA-DOA	P06340	250 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	HSPA1A	P0DMV8	641 aa	Known RBP	12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	HSPA1B	P0DMV9	641 aa	Known RBP	12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	ZBTB48	P10074	688 aa	Predicted RBP	12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	GUCY1A2	P33402	732 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	PPIL2	Q13356	520 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	MOGS	Q13724	837 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	MCMDC2	Q4G0Z9	681 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	SBK1	Q52WX2	424 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	TTC6	Q86TZ1	520 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	TICAM2	Q86XR7	235 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	ERO1B	Q86YB8	467 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	IFNL3	Q8IZI9	196 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	BRI3BP	Q8WY22	251 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	PTPN18	Q99952	460 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	DOCK1	Q14185	1865 aa		12.31	□□□□□ -0.44
MRPL55-223	ENST00000459783	TESPA1	A2RU30	521 aa	Predicted RBP	12.3	□□□□□ -0.44
MRPL55-223	ENST00000459783	PATL2	C9JE40	543 aa	Known RBP	12.3	□□□□□ -0.44
MRPL55-223	ENST00000459783	FOXN1	O15353	648 aa		12.3	□□□□□ -0.44
MRPL55-223	ENST00000459783	CHML	P26374	656 aa		12.3	□□□□□ -0.44
MRPL55-223	ENST00000459783	TM4SF4	P48230	202 aa		12.3	□□□□□ -0.44
MRPL55-223	ENST00000459783	PPAT	Q06203	517 aa		12.3	□□□□□ -0.44
MRPL55-223	ENST00000459783	GIMAP6	Q6P9H5	292 aa		12.3	□□□□□ -0.44
MRPL55-223	ENST00000459783	CWC27	Q6UX04	472 aa	Known RBP	12.3	□□□□□ -0.44
MRPL55-223	ENST00000459783	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.3	□□□□□ -0.44
MRPL55-223	ENST00000459783	KCNH4	Q9UQ05	1017 aa		12.3	□□□□□ -0.44
MRPL55-223	ENST00000459783	CCDC171	Q6TFL3	1326 aa		12.3	□□□□□ -0.44
MRPL55-223	ENST00000459783	PCNT	O95613	3336 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms