RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 FAM196BA6NMK8 535 aa19.56■□□□□ 0.72
COL7A1-203ENST00000459756 SMARCA5O60264 1052 aaPredicted RBP19.56■□□□□ 0.72
COL7A1-203ENST00000459756 PDE6AP16499 860 aa19.56■□□□□ 0.72
COL7A1-203ENST00000459756 METTL16Q86W50 562 aaKnown RBP19.56■□□□□ 0.72
COL7A1-203ENST00000459756 FOXP4Q8IVH2 680 aaPredicted RBP19.56■□□□□ 0.72
COL7A1-203ENST00000459756 HAUS7Q99871 368 aa19.56■□□□□ 0.72
COL7A1-203ENST00000459756 AFG3L2Q9Y4W6 797 aa19.56■□□□□ 0.72
COL7A1-203ENST00000459756 PCDHB15Q9Y5E8 787 aa19.56■□□□□ 0.72
COL7A1-203ENST00000459756 USP5P45974 858 aa19.55■□□□□ 0.72
COL7A1-203ENST00000459756 MOGSQ13724 837 aa19.55■□□□□ 0.72
COL7A1-203ENST00000459756 FBXO46Q6PJ61 603 aaPredicted RBP19.55■□□□□ 0.72
COL7A1-203ENST00000459756 BOLA2Q9H3K6 86 aa19.55■□□□□ 0.72
COL7A1-203ENST00000459756 PAG1Q9NWQ8 432 aa19.55■□□□□ 0.72
COL7A1-203ENST00000459756 PALD1Q9ULE6 856 aa19.55■□□□□ 0.72
COL7A1-203ENST00000459756 SIPA1L1O43166 1804 aa19.54■□□□□ 0.72
COL7A1-203ENST00000459756 PHIPQ8WWQ0 1821 aa19.54■□□□□ 0.72
COL7A1-203ENST00000459756 A0A0G2JLL6 359 aaPredicted RBP19.54■□□□□ 0.72
COL7A1-203ENST00000459756 MAGEB6P1A0A0J9YX57 407 aa19.54■□□□□ 0.72
COL7A1-203ENST00000459756 PDHXO00330 501 aa19.54■□□□□ 0.72
COL7A1-203ENST00000459756 TLR2O60603 784 aa19.54■□□□□ 0.72
COL7A1-203ENST00000459756 HLA-DOAP06340 250 aa19.54■□□□□ 0.72
COL7A1-203ENST00000459756 CAP2P40123 477 aa19.54■□□□□ 0.72
COL7A1-203ENST00000459756 FASTKD5Q7L8L6 764 aaKnown RBP19.54■□□□□ 0.72
COL7A1-203ENST00000459756 PRRT2Q7Z6L0 340 aaPredicted RBP19.54■□□□□ 0.72
COL7A1-203ENST00000459756 CRACR2BQ8N4Y2 399 aaPredicted RBP19.54■□□□□ 0.72
COL7A1-203ENST00000459756 RIOK1Q9BRS2 568 aaKnown RBP19.54■□□□□ 0.72
COL7A1-203ENST00000459756 TRIM34Q9BYJ4 488 aa19.54■□□□□ 0.72
COL7A1-203ENST00000459756 TBC1D2Q9BYX2 928 aa19.54■□□□□ 0.72
COL7A1-203ENST00000459756 SAP30BPQ9UHR5 308 aaKnown RBP19.54■□□□□ 0.72
COL7A1-203ENST00000459756 TRIM17Q9Y577 477 aa19.54■□□□□ 0.72
COL7A1-203ENST00000459756 ZNF532Q9HCE3 1301 aa19.53■□□□□ 0.72
COL7A1-203ENST00000459756 OTOP1Q7RTM1 612 aa19.53■□□□□ 0.72
COL7A1-203ENST00000459756 CD99L2Q8TCZ2 262 aa19.53■□□□□ 0.72
COL7A1-203ENST00000459756 EDC3Q96F86 508 aaKnown RBP19.53■□□□□ 0.72
COL7A1-203ENST00000459756 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.53■□□□□ 0.721e-6■■■■■ 38.5
COL7A1-203ENST00000459756 ECHDC1Q9NTX5 307 aa19.53■□□□□ 0.72
COL7A1-203ENST00000459756 HPS5Q9UPZ3 1129 aa19.53■□□□□ 0.72
COL7A1-203ENST00000459756 ATAD5Q96QE3 1844 aa19.53■□□□□ 0.72
COL7A1-203ENST00000459756 MYH1P12882 1939 aa19.53■□□□□ 0.72
COL7A1-203ENST00000459756 TCRBV5S4A2TA0A5A2 114 aa19.52■□□□□ 0.72
COL7A1-203ENST00000459756 ARHGEF6Q15052 776 aa19.52■□□□□ 0.72
COL7A1-203ENST00000459756 GPATCH3Q96I76 525 aa19.52■□□□□ 0.72
COL7A1-203ENST00000459756 CRBNQ96SW2 442 aa19.52■□□□□ 0.72
COL7A1-203ENST00000459756 PTPRFP10586 1907 aa19.51■□□□□ 0.71
COL7A1-203ENST00000459756 TRIM75PA6NK02 468 aa19.51■□□□□ 0.71
COL7A1-203ENST00000459756 RRP1BQ14684 758 aaKnown RBP19.51■□□□□ 0.71
COL7A1-203ENST00000459756 GPAT2Q6NUI2 795 aa19.51■□□□□ 0.71
COL7A1-203ENST00000459756 CRNKL1Q9BZJ0 848 aaKnown RBP19.51■□□□□ 0.71
COL7A1-203ENST00000459756 DNAJC18Q9H819 358 aa19.51■□□□□ 0.71
COL7A1-203ENST00000459756 EFCC1Q9HA90 598 aa19.51■□□□□ 0.71
COL7A1-203ENST00000459756 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.51■□□□□ 0.71
COL7A1-203ENST00000459756 HTTP42858 3142 aa19.5■□□□□ 0.71
COL7A1-203ENST00000459756 ASNSP08243 561 aa19.5■□□□□ 0.71
COL7A1-203ENST00000459756 ADD2P35612 726 aa19.5■□□□□ 0.71
COL7A1-203ENST00000459756 ZNF280CQ8ND82 737 aa19.5■□□□□ 0.71
COL7A1-203ENST00000459756 PARK7Q99497 189 aaKnown RBP19.5■□□□□ 0.71
COL7A1-203ENST00000459756 EHD4Q9H223 541 aa19.5■□□□□ 0.71
COL7A1-203ENST00000459756 GINM1Q9NU53 330 aa19.5■□□□□ 0.71
COL7A1-203ENST00000459756 SLC45A1Q9Y2W3 748 aa19.5■□□□□ 0.71
COL7A1-203ENST00000459756 USP17L5A8MUK1 530 aa19.49■□□□□ 0.71
COL7A1-203ENST00000459756 SPP2Q13103 211 aa19.49■□□□□ 0.71
COL7A1-203ENST00000459756 C17orf99Q6UX52 265 aa19.49■□□□□ 0.71
COL7A1-203ENST00000459756 GADL1Q6ZQY3 521 aa19.49■□□□□ 0.71
COL7A1-203ENST00000459756 TTC6Q86TZ1 520 aa19.49■□□□□ 0.71
COL7A1-203ENST00000459756 CCDC84Q86UT8 332 aaPredicted RBP19.49■□□□□ 0.71
COL7A1-203ENST00000459756 AS3MTQ9HBK9 375 aa19.49■□□□□ 0.71
COL7A1-203ENST00000459756 SERPINB13Q9UIV8 391 aa19.49■□□□□ 0.71
COL7A1-203ENST00000459756 ADGRA2Q96PE1 1338 aa19.49■□□□□ 0.71
COL7A1-203ENST00000459756 AAMPQ13685 434 aa19.48■□□□□ 0.71
COL7A1-203ENST00000459756 KIF22Q14807 665 aa19.48■□□□□ 0.71
COL7A1-203ENST00000459756 UBE3CQ15386 1083 aa19.48■□□□□ 0.71
COL7A1-203ENST00000459756 SLC4A8Q2Y0W8 1093 aa19.48■□□□□ 0.71
COL7A1-203ENST00000459756 ZSCAN25Q6NSZ9 544 aa19.48■□□□□ 0.71
COL7A1-203ENST00000459756 PTPN22Q9Y2R2 807 aa19.48■□□□□ 0.71
COL7A1-203ENST00000459756 MYH7P12883 1935 aa19.48■□□□□ 0.71
COL7A1-203ENST00000459756 DDX60LQ5H9U9 1706 aaKnown RBP19.48■□□□□ 0.71
COL7A1-203ENST00000459756 RGS19P49795 217 aa19.47■□□□□ 0.71
COL7A1-203ENST00000459756 LACTBP83111 547 aaPredicted RBP19.47■□□□□ 0.71
COL7A1-203ENST00000459756 CAP1Q01518 475 aa19.47■□□□□ 0.71
COL7A1-203ENST00000459756 LCORLQ8N3X6 602 aa19.47■□□□□ 0.71
COL7A1-203ENST00000459756 PROCA1Q8NCQ7 364 aaPredicted RBP19.47■□□□□ 0.71
COL7A1-203ENST00000459756 WDR18Q9BV38 432 aa19.47■□□□□ 0.71
COL7A1-203ENST00000459756 CPA4Q9UI42 421 aa19.47■□□□□ 0.71
COL7A1-203ENST00000459756 AGTPBP1Q9UPW5 1226 aa19.47■□□□□ 0.71
COL7A1-203ENST00000459756 NAV1Q8NEY1 1877 aa19.47■□□□□ 0.71
COL7A1-203ENST00000459756 GNRH1P01148 92 aa19.46■□□□□ 0.71
COL7A1-203ENST00000459756 POLR3DP05423 398 aaPredicted RBP19.46■□□□□ 0.71
COL7A1-203ENST00000459756 CYP2C8P10632 490 aa19.46■□□□□ 0.71
COL7A1-203ENST00000459756 TATDN1Q6P1N9 297 aa19.46■□□□□ 0.71
COL7A1-203ENST00000459756 ARMT1Q9H993 441 aa19.46■□□□□ 0.71
COL7A1-203ENST00000459756 ZBTB21Q9ULJ3 1066 aa19.46■□□□□ 0.71
COL7A1-203ENST00000459756 LOC285556D6RIA3 1793 aa19.45■□□□□ 0.7
COL7A1-203ENST00000459756 MBD4O95243 580 aa19.45■□□□□ 0.7
COL7A1-203ENST00000459756 GDF11O95390 407 aa19.45■□□□□ 0.7
COL7A1-203ENST00000459756 JAG1P78504 1218 aa19.45■□□□□ 0.7
COL7A1-203ENST00000459756 DCP1AQ9NPI6 582 aaPredicted RBP19.45■□□□□ 0.7
COL7A1-203ENST00000459756 MCM9Q9NXL9 1143 aa19.45■□□□□ 0.7
COL7A1-203ENST00000459756 TTC41PQ6P2S7 1318 aa19.45■□□□□ 0.7
COL7A1-203ENST00000459756 BCRP11274 1271 aa19.44■□□□□ 0.7
COL7A1-203ENST00000459756 PLCD1P51178 756 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms