RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 CRACR2BQ8N4Y2 399 aaPredicted RBP19.68■□□□□ 0.74
CPSF6-203ENST00000456847 ERO1AQ96HE7 468 aa19.68■□□□□ 0.74
CPSF6-203ENST00000456847 PAG1Q9NWQ8 432 aa19.68■□□□□ 0.74
CPSF6-203ENST00000456847 PI4KBQ9UBF8 816 aa19.68■□□□□ 0.74
CPSF6-203ENST00000456847 HERC5Q9UII4 1024 aaKnown RBP19.68■□□□□ 0.74
CPSF6-203ENST00000456847 ZHX2Q9Y6X8 837 aa19.68■□□□□ 0.74
CPSF6-203ENST00000456847 PTPRFP10586 1907 aa19.68■□□□□ 0.74
CPSF6-203ENST00000456847 PTPRAP18433 802 aa19.68■□□□□ 0.74
CPSF6-203ENST00000456847 ATP5JP18859 108 aa19.68■□□□□ 0.74
CPSF6-203ENST00000456847 PKN2Q16513 984 aaKnown RBP19.68■□□□□ 0.74
CPSF6-203ENST00000456847 SLC9C2Q5TAH2 1124 aa19.68■□□□□ 0.74
CPSF6-203ENST00000456847 EDC3Q96F86 508 aaKnown RBP19.68■□□□□ 0.74
CPSF6-203ENST00000456847 DCTPP1Q9H773 170 aa19.68■□□□□ 0.74
CPSF6-203ENST00000456847 ZCCHC17Q9NP64 241 aaKnown RBP19.68■□□□□ 0.74
CPSF6-203ENST00000456847 HLA-DOAP06340 250 aa19.67■□□□□ 0.74
CPSF6-203ENST00000456847 PDE6AP16499 860 aa19.67■□□□□ 0.74
CPSF6-203ENST00000456847 SLC4A8Q2Y0W8 1093 aa19.67■□□□□ 0.74
CPSF6-203ENST00000456847 MAGEB6P1A0A0J9YX57 407 aa19.66■□□□□ 0.74
CPSF6-203ENST00000456847 SP3Q02447 781 aa19.66■□□□□ 0.74
CPSF6-203ENST00000456847 CD99L2Q8TCZ2 262 aa19.66■□□□□ 0.74
CPSF6-203ENST00000456847 GPATCH3Q96I76 525 aa19.66■□□□□ 0.74
CPSF6-203ENST00000456847 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.66■□□□□ 0.74
CPSF6-203ENST00000456847 PALD1Q9ULE6 856 aa19.66■□□□□ 0.74
CPSF6-203ENST00000456847 PCDHB15Q9Y5E8 787 aa19.66■□□□□ 0.74
CPSF6-203ENST00000456847 CXCL11O14625 94 aa19.66■□□□□ 0.74
CPSF6-203ENST00000456847 ANKRD23Q86SG2 305 aa19.66■□□□□ 0.74
CPSF6-203ENST00000456847 TRIM17Q9Y577 477 aa19.66■□□□□ 0.74
CPSF6-203ENST00000456847 ZNF532Q9HCE3 1301 aa19.66■□□□□ 0.74
CPSF6-203ENST00000456847 GADL1Q6ZQY3 521 aa19.65■□□□□ 0.74
CPSF6-203ENST00000456847 CCDC84Q86UT8 332 aaPredicted RBP19.65■□□□□ 0.74
CPSF6-203ENST00000456847 HAUS7Q99871 368 aa19.65■□□□□ 0.74
CPSF6-203ENST00000456847 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.65■□□□□ 0.743e-7■□□□□ 11.1
CPSF6-203ENST00000456847 TRIM75PA6NK02 468 aa19.64■□□□□ 0.74
CPSF6-203ENST00000456847 PDHXO00330 501 aa19.64■□□□□ 0.74
CPSF6-203ENST00000456847 AFG3L2Q9Y4W6 797 aa19.64■□□□□ 0.74
CPSF6-203ENST00000456847 CAP2P40123 477 aa19.64■□□□□ 0.73
CPSF6-203ENST00000456847 FBXO46Q6PJ61 603 aaPredicted RBP19.64■□□□□ 0.73
CPSF6-203ENST00000456847 ECHDC1Q9NTX5 307 aa19.64■□□□□ 0.73
CPSF6-203ENST00000456847 DDX60LQ5H9U9 1706 aaKnown RBP19.64■□□□□ 0.73
CPSF6-203ENST00000456847 A0A0G2JLL6 359 aaPredicted RBP19.63■□□□□ 0.73
CPSF6-203ENST00000456847 FASTKD5Q7L8L6 764 aaKnown RBP19.63■□□□□ 0.73
CPSF6-203ENST00000456847 PRRT2Q7Z6L0 340 aaPredicted RBP19.63■□□□□ 0.73
CPSF6-203ENST00000456847 FOXP4Q8IVH2 680 aaPredicted RBP19.63■□□□□ 0.73
CPSF6-203ENST00000456847 RIOK1Q9BRS2 568 aaKnown RBP19.63■□□□□ 0.73
CPSF6-203ENST00000456847 CRNKL1Q9BZJ0 848 aaKnown RBP19.63■□□□□ 0.73
CPSF6-203ENST00000456847 HPS5Q9UPZ3 1129 aa19.63■□□□□ 0.73
CPSF6-203ENST00000456847 TLR2O60603 784 aa19.63■□□□□ 0.73
CPSF6-203ENST00000456847 OTOP1Q7RTM1 612 aa19.63■□□□□ 0.73
CPSF6-203ENST00000456847 MOGSQ13724 837 aa19.62■□□□□ 0.73
CPSF6-203ENST00000456847 PARK7Q99497 189 aaKnown RBP19.62■□□□□ 0.73
CPSF6-203ENST00000456847 EFCC1Q9HA90 598 aa19.62■□□□□ 0.73
CPSF6-203ENST00000456847 TCRBV5S4A2TA0A5A2 114 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 ADD2P35612 726 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 RRP1BQ14684 758 aaKnown RBP19.61■□□□□ 0.73
CPSF6-203ENST00000456847 TBC1D2Q9BYX2 928 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 DNAJC18Q9H819 358 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 AS3MTQ9HBK9 375 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 ZBTB47Q9UFB7 747 aaPredicted RBP19.61■□□□□ 0.73
CPSF6-203ENST00000456847 LOC285556D6RIA3 1793 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 ZSWIM8A7E2V4 1837 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 USP17L5A8MUK1 530 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 KIF22Q14807 665 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 ARHGEF6Q15052 776 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 TTC6Q86TZ1 520 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 LCORLQ8N3X6 602 aa19.61■□□□□ 0.73
CPSF6-203ENST00000456847 GDF11O95390 407 aa19.6■□□□□ 0.73
CPSF6-203ENST00000456847 TSHZ3Q63HK5 1081 aa19.6■□□□□ 0.73
CPSF6-203ENST00000456847 ZSCAN25Q6NSZ9 544 aa19.6■□□□□ 0.73
CPSF6-203ENST00000456847 GPAT2Q6NUI2 795 aa19.6■□□□□ 0.73
CPSF6-203ENST00000456847 ZNF280CQ8ND82 737 aa19.6■□□□□ 0.73
CPSF6-203ENST00000456847 CPA4Q9UI42 421 aa19.6■□□□□ 0.73
CPSF6-203ENST00000456847 POLR3DP05423 398 aaPredicted RBP19.59■□□□□ 0.73
CPSF6-203ENST00000456847 ASNSP08243 561 aa19.59■□□□□ 0.73
CPSF6-203ENST00000456847 SPP2Q13103 211 aa19.59■□□□□ 0.73
CPSF6-203ENST00000456847 METTL16Q86W50 562 aaKnown RBP19.59■□□□□ 0.73
CPSF6-203ENST00000456847 ARMT1Q9H993 441 aa19.59■□□□□ 0.73
CPSF6-203ENST00000456847 MBD4O95243 580 aa19.59■□□□□ 0.73
CPSF6-203ENST00000456847 SLFNL1Q499Z3 407 aa19.59■□□□□ 0.73
CPSF6-203ENST00000456847 SDR42E1Q8WUS8 393 aa19.59■□□□□ 0.73
CPSF6-203ENST00000456847 SERPINB13Q9UIV8 391 aa19.59■□□□□ 0.73
CPSF6-203ENST00000456847 MYH8P13535 1937 aa19.58■□□□□ 0.72
CPSF6-203ENST00000456847 BAZ2AQ9UIF9 1905 aaKnown RBP19.58■□□□□ 0.72
CPSF6-203ENST00000456847 ECM2O94769 699 aaPredicted RBP19.58■□□□□ 0.72
CPSF6-203ENST00000456847 CYP2C8P10632 490 aa19.58■□□□□ 0.72
CPSF6-203ENST00000456847 EHD4Q9H223 541 aa19.58■□□□□ 0.72
CPSF6-203ENST00000456847 MCM9Q9NXL9 1143 aa19.58■□□□□ 0.72
CPSF6-203ENST00000456847 SOX10P56693 466 aa19.57■□□□□ 0.72
CPSF6-203ENST00000456847 ZBTB21Q9ULJ3 1066 aa19.57■□□□□ 0.72
CPSF6-203ENST00000456847 AGTPBP1Q9UPW5 1226 aa19.57■□□□□ 0.72
CPSF6-203ENST00000456847 ADGRA2Q96PE1 1338 aa19.57■□□□□ 0.72
CPSF6-203ENST00000456847 HMGCS2P54868 508 aa19.57■□□□□ 0.72
CPSF6-203ENST00000456847 LACTBP83111 547 aaPredicted RBP19.57■□□□□ 0.72
CPSF6-203ENST00000456847 UBE3CQ15386 1083 aa19.57■□□□□ 0.72
CPSF6-203ENST00000456847 C17orf99Q6UX52 265 aa19.57■□□□□ 0.72
CPSF6-203ENST00000456847 GINM1Q9NU53 330 aa19.57■□□□□ 0.72
CPSF6-203ENST00000456847 PTPN22Q9Y2R2 807 aa19.57■□□□□ 0.72
CPSF6-203ENST00000456847 SLC45A1Q9Y2W3 748 aa19.57■□□□□ 0.72
CPSF6-203ENST00000456847 SHROOM1Q2M3G4 852 aaPredicted RBP19.56■□□□□ 0.72
CPSF6-203ENST00000456847 PROCA1Q8NCQ7 364 aaPredicted RBP19.56■□□□□ 0.72
CPSF6-203ENST00000456847 SMCR8Q8TEV9 937 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms