RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 TEPSINQ96N21 525 aa16.79■□□□□ 0.28
LINC00887-204ENST00000456816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.79■□□□□ 0.28
LINC00887-204ENST00000456816 SERPINB13Q9UIV8 391 aa16.79■□□□□ 0.28
LINC00887-204ENST00000456816 FOCADQ5VW36 1801 aa16.79■□□□□ 0.28
LINC00887-204ENST00000456816 CDK5RAP2Q96SN8 1893 aa16.78■□□□□ 0.28
LINC00887-204ENST00000456816 ZKSCAN1P17029 563 aaPredicted RBP16.78■□□□□ 0.28
LINC00887-204ENST00000456816 PDE4BQ07343 736 aa16.78■□□□□ 0.28
LINC00887-204ENST00000456816 PRKG1Q13976 671 aa16.78■□□□□ 0.28
LINC00887-204ENST00000456816 CREB3L3Q68CJ9 461 aa16.78■□□□□ 0.28
LINC00887-204ENST00000456816 MIGA2Q7L4E1 593 aa16.78■□□□□ 0.28
LINC00887-204ENST00000456816 DYNLL2Q96FJ2 89 aa16.78■□□□□ 0.28
LINC00887-204ENST00000456816 USP26Q9BXU7 913 aa16.78■□□□□ 0.28
LINC00887-204ENST00000456816 BACH2Q9BYV9 841 aa16.78■□□□□ 0.28
LINC00887-204ENST00000456816 ZNF287Q9HBT7 754 aa16.78■□□□□ 0.28
LINC00887-204ENST00000456816 FAM196BA6NMK8 535 aa16.77■□□□□ 0.28
LINC00887-204ENST00000456816 SLC27A2O14975 620 aa16.77■□□□□ 0.28
LINC00887-204ENST00000456816 EPB41L2O43491 1005 aaKnown RBP16.77■□□□□ 0.28
LINC00887-204ENST00000456816 TOMM70O94826 608 aa16.77■□□□□ 0.28
LINC00887-204ENST00000456816 EVX2Q03828 476 aa16.77■□□□□ 0.28
LINC00887-204ENST00000456816 FOXP4Q8IVH2 680 aaPredicted RBP16.77■□□□□ 0.28
LINC00887-204ENST00000456816 RBM46Q8TBY0 533 aaKnown RBP16.77■□□□□ 0.28
LINC00887-204ENST00000456816 EHD4Q9H223 541 aa16.77■□□□□ 0.28
LINC00887-204ENST00000456816 RNF41Q9H4P4 317 aaPredicted RBP16.77■□□□□ 0.28
LINC00887-204ENST00000456816 MKNK2Q9HBH9 465 aa16.77■□□□□ 0.28
LINC00887-204ENST00000456816 HERC5Q9UII4 1024 aaKnown RBP16.77■□□□□ 0.28
LINC00887-204ENST00000456816 MYH1P12882 1939 aa16.76■□□□□ 0.27
LINC00887-204ENST00000456816 BAZ2AQ9UIF9 1905 aaKnown RBP16.76■□□□□ 0.27
LINC00887-204ENST00000456816 DDX60LQ5H9U9 1706 aaKnown RBP16.76■□□□□ 0.27
LINC00887-204ENST00000456816 RRP12Q5JTH9 1297 aaKnown RBP16.76■□□□□ 0.27
LINC00887-204ENST00000456816 MFSD6Q6ZSS7 791 aa16.76■□□□□ 0.27
LINC00887-204ENST00000456816 SWAP70Q9UH65 585 aa16.76■□□□□ 0.27
LINC00887-204ENST00000456816 ANAPC4Q9UJX5 808 aa16.76■□□□□ 0.27
LINC00887-204ENST00000456816 SMIM22K7EJ46 135 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 PPP1R12BO60237 982 aaPredicted RBP16.75■□□□□ 0.27
LINC00887-204ENST00000456816 PRDM1O75626 825 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 CELF2O95319 508 aaKnown RBP16.75■□□□□ 0.27
LINC00887-204ENST00000456816 CYP21A2P08686 494 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 CDK8P49336 464 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 TRDNQ13061 729 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 NECTIN1Q15223 517 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 TBC1D10CQ8IV04 446 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 SLC44A5Q8NCS7 719 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 ZNF341Q9BYN7 854 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 ROBO3Q96MS0 1386 aa16.75■□□□□ 0.27
LINC00887-204ENST00000456816 LAMB1P07942 1786 aa16.74■□□□□ 0.27
LINC00887-204ENST00000456816 SLURP2P0DP57 97 aa16.74■□□□□ 0.27
LINC00887-204ENST00000456816 HSPA4P34932 840 aa16.74■□□□□ 0.27
LINC00887-204ENST00000456816 FMR1Q06787 632 aaKnown RBP eCLIP16.74■□□□□ 0.27
LINC00887-204ENST00000456816 ARMC9Q7Z3E5 817 aa16.74■□□□□ 0.27
LINC00887-204ENST00000456816 RALYLQ86SE5 291 aaKnown RBP16.74■□□□□ 0.27
LINC00887-204ENST00000456816 ZNF444Q8N0Y2 327 aaPredicted RBP16.74■□□□□ 0.27
LINC00887-204ENST00000456816 STAG1Q8WVM7 1258 aa16.74■□□□□ 0.27
LINC00887-204ENST00000456816 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.74■□□□□ 0.27
LINC00887-204ENST00000456816 MPHOSPH10O00566 681 aaKnown RBP16.73■□□□□ 0.27
LINC00887-204ENST00000456816 TBC1D12O60347 775 aa16.73■□□□□ 0.27
LINC00887-204ENST00000456816 RANBP6O60518 1105 aaKnown RBP16.73■□□□□ 0.27
LINC00887-204ENST00000456816 IREB2P48200 963 aaKnown RBP16.73■□□□□ 0.27
LINC00887-204ENST00000456816 GABPAQ06546 454 aa16.73■□□□□ 0.27
LINC00887-204ENST00000456816 FSTL1Q12841 308 aa16.73■□□□□ 0.27
LINC00887-204ENST00000456816 KRT32Q14532 448 aa16.73■□□□□ 0.27
LINC00887-204ENST00000456816 WRNIP1Q96S55 665 aa16.73■□□□□ 0.27
LINC00887-204ENST00000456816 C22orf23Q9BZE7 217 aa16.73■□□□□ 0.27
LINC00887-204ENST00000456816 NBPF3Q9H094 633 aa16.73■□□□□ 0.27
LINC00887-204ENST00000456816 CNNM2Q9H8M5 875 aa16.73■□□□□ 0.27
LINC00887-204ENST00000456816 TAOK2Q9UL54 1235 aa16.73■□□□□ 0.27
LINC00887-204ENST00000456816 ANGEL1Q9UNK9 670 aaKnown RBP16.73■□□□□ 0.27
LINC00887-204ENST00000456816 FZD1Q9UP38 647 aa16.73■□□□□ 0.27
LINC00887-204ENST00000456816 SSC5DA1L4H1 1573 aa16.72■□□□□ 0.27
LINC00887-204ENST00000456816 E7EWF7 191 aa16.72■□□□□ 0.27
LINC00887-204ENST00000456816 ITGBL1O95965 494 aaPredicted RBP16.72■□□□□ 0.27
LINC00887-204ENST00000456816 PCP11498 1178 aaKnown RBP16.72■□□□□ 0.27
LINC00887-204ENST00000456816 SHMT1P34896 483 aa16.72■□□□□ 0.27
LINC00887-204ENST00000456816 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
LINC00887-204ENST00000456816 CERKLQ49MI3 558 aaPredicted RBP16.72■□□□□ 0.27
LINC00887-204ENST00000456816 C2orf69Q8N8R5 385 aa16.72■□□□□ 0.27
LINC00887-204ENST00000456816 KRT23Q9C075 422 aa16.72■□□□□ 0.27
LINC00887-204ENST00000456816 DNAJC18Q9H819 358 aa16.72■□□□□ 0.27
LINC00887-204ENST00000456816 INCENPQ9NQS7 918 aa16.72■□□□□ 0.27
LINC00887-204ENST00000456816 NEDD4P46934 1319 aa16.71■□□□□ 0.27
LINC00887-204ENST00000456816 POLR2AP24928 1970 aaKnown RBP16.71■□□□□ 0.27
LINC00887-204ENST00000456816 TSPY2A6NKD2 308 aa16.71■□□□□ 0.27
LINC00887-204ENST00000456816 GDF11O95390 407 aa16.71■□□□□ 0.27
LINC00887-204ENST00000456816 METTL16Q86W50 562 aaKnown RBP16.71■□□□□ 0.27
LINC00887-204ENST00000456816 RASEFQ8IZ41 740 aa16.71■□□□□ 0.27
LINC00887-204ENST00000456816 NCOA7Q8NI08 942 aa16.71■□□□□ 0.27
LINC00887-204ENST00000456816 ESR2Q92731 530 aa16.71■□□□□ 0.27
LINC00887-204ENST00000456816 GBA2Q9HCG7 927 aaPredicted RBP16.71■□□□□ 0.27
LINC00887-204ENST00000456816 CABP5Q9NP86 173 aa16.71■□□□□ 0.27
LINC00887-204ENST00000456816 SNX14Q9Y5W7 946 aa16.71■□□□□ 0.27
LINC00887-204ENST00000456816 TAF6LQ9Y6J9 622 aa16.71■□□□□ 0.27
LINC00887-204ENST00000456816 B4E1Z4 1266 aa16.7■□□□□ 0.26
LINC00887-204ENST00000456816 ORC4O43929 436 aa16.7■□□□□ 0.26
LINC00887-204ENST00000456816 TSPY3P0CV98 308 aa16.7■□□□□ 0.26
LINC00887-204ENST00000456816 TSPY8P0CW00 308 aa16.7■□□□□ 0.26
LINC00887-204ENST00000456816 RASA1P20936 1047 aa16.7■□□□□ 0.26
LINC00887-204ENST00000456816 ABCB5Q2M3G0 1257 aa16.7■□□□□ 0.26
LINC00887-204ENST00000456816 FAM47AQ5JRC9 791 aa16.7■□□□□ 0.26
LINC00887-204ENST00000456816 CCDC17Q96LX7 622 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms