RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 SNAPC2Q13487 334 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 CCL15Q16663 113 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 TTC6Q86TZ1 520 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 SCYL3Q8IZE3 742 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 CNKSR2Q8WXI2 1034 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 RIOK1Q9BRS2 568 aaKnown RBP12.47□□□□□ -0.41
TOP3B-212ENST00000456075 ARMT1Q9H993 441 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 PRDM10Q9NQV6 1147 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 OTOFQ9HC10 1997 aa12.47□□□□□ -0.41
TOP3B-212ENST00000456075 CETPP11597 493 aa12.46□□□□□ -0.41
TOP3B-212ENST00000456075 GJA5P36382 358 aa12.46□□□□□ -0.41
TOP3B-212ENST00000456075 PDE1AP54750 535 aa12.46□□□□□ -0.41
TOP3B-212ENST00000456075 NUCB1Q02818 461 aa12.46□□□□□ -0.41
TOP3B-212ENST00000456075 NOL9Q5SY16 702 aaKnown RBP12.46□□□□□ -0.41
TOP3B-212ENST00000456075 FOXP4Q8IVH2 680 aaPredicted RBP12.46□□□□□ -0.41
TOP3B-212ENST00000456075 LCORLQ8N3X6 602 aa12.46□□□□□ -0.41
TOP3B-212ENST00000456075 PI4K2BQ8TCG2 481 aa12.46□□□□□ -0.41
TOP3B-212ENST00000456075 MCM9Q9NXL9 1143 aa12.46□□□□□ -0.41
TOP3B-212ENST00000456075 PHF20L1A8MW92 1017 aa12.45□□□□□ -0.42
TOP3B-212ENST00000456075 TRIM6-TRIM34B2RNG4 842 aa12.45□□□□□ -0.42
TOP3B-212ENST00000456075 IRF6O14896 467 aa12.45□□□□□ -0.42
TOP3B-212ENST00000456075 RNF113AO15541 343 aaKnown RBP12.45□□□□□ -0.42
TOP3B-212ENST00000456075 MAP3K10Q02779 954 aa12.45□□□□□ -0.42
TOP3B-212ENST00000456075 IFNL1Q8IU54 200 aa12.45□□□□□ -0.42
TOP3B-212ENST00000456075 APPBP2Q92624 585 aa12.45□□□□□ -0.42
TOP3B-212ENST00000456075 STAP2Q9UGK3 403 aa12.45□□□□□ -0.42
TOP3B-212ENST00000456075 SERPINB13Q9UIV8 391 aa12.45□□□□□ -0.42
TOP3B-212ENST00000456075 SLC4A4Q9Y6R1 1079 aa12.45□□□□□ -0.42
TOP3B-212ENST00000456075 ZHX2Q9Y6X8 837 aa12.45□□□□□ -0.42
TOP3B-212ENST00000456075 NEFLP07196 543 aa12.44□□□□□ -0.42
TOP3B-212ENST00000456075 SLURP2P0DP57 97 aa12.44□□□□□ -0.42
TOP3B-212ENST00000456075 SLFNL1Q499Z3 407 aa12.44□□□□□ -0.42
TOP3B-212ENST00000456075 COL13A1Q5TAT6 717 aaPredicted RBP12.44□□□□□ -0.42
TOP3B-212ENST00000456075 SDR42E1Q8WUS8 393 aa12.44□□□□□ -0.42
TOP3B-212ENST00000456075 EVI5LQ96CN4 794 aa12.44□□□□□ -0.42
TOP3B-212ENST00000456075 ATP8A2Q9NTI2 1148 aa12.44□□□□□ -0.42
TOP3B-212ENST00000456075 SALL3Q9BXA9 1300 aa12.43□□□□□ -0.42
TOP3B-212ENST00000456075 IGF2BP3O00425 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
TOP3B-212ENST00000456075 TBC1D8O95759 1140 aa12.43□□□□□ -0.42
TOP3B-212ENST00000456075 ASNSP08243 561 aa12.43□□□□□ -0.42
TOP3B-212ENST00000456075 PTPRAP18433 802 aa12.43□□□□□ -0.42
TOP3B-212ENST00000456075 CAP2P40123 477 aa12.43□□□□□ -0.42
TOP3B-212ENST00000456075 TNS4Q8IZW8 715 aa12.43□□□□□ -0.42
TOP3B-212ENST00000456075 BRI3BPQ8WY22 251 aa12.43□□□□□ -0.42
TOP3B-212ENST00000456075 MS4A4AQ96JQ5 239 aa12.43□□□□□ -0.42
TOP3B-212ENST00000456075 PUS7LQ9H0K6 701 aaKnown RBP12.43□□□□□ -0.42
TOP3B-212ENST00000456075 EHD4Q9H223 541 aa12.43□□□□□ -0.42
TOP3B-212ENST00000456075 AS3MTQ9HBK9 375 aa12.43□□□□□ -0.42
TOP3B-212ENST00000456075 DCP1AQ9NPI6 582 aaPredicted RBP12.43□□□□□ -0.42
TOP3B-212ENST00000456075 TESPA1A2RU30 521 aaPredicted RBP12.42□□□□□ -0.42
TOP3B-212ENST00000456075 TRIM75PA6NK02 468 aa12.42□□□□□ -0.42
TOP3B-212ENST00000456075 CXCL11O14625 94 aa12.42□□□□□ -0.42
TOP3B-212ENST00000456075 PRKAB2O43741 272 aa12.42□□□□□ -0.42
TOP3B-212ENST00000456075 CHGBP05060 677 aa12.42□□□□□ -0.42
TOP3B-212ENST00000456075 APPP05067 770 aa12.42□□□□□ -0.42
TOP3B-212ENST00000456075 CENPBP07199 599 aaPredicted RBP12.42□□□□□ -0.42
TOP3B-212ENST00000456075 GNAT2P19087 354 aa12.42□□□□□ -0.42
TOP3B-212ENST00000456075 TAF1CQ15572 869 aaPredicted RBP12.42□□□□□ -0.42
TOP3B-212ENST00000456075 FASTKD5Q7L8L6 764 aaKnown RBP12.42□□□□□ -0.42
TOP3B-212ENST00000456075 RILPL2Q969X0 211 aa12.42□□□□□ -0.42
TOP3B-212ENST00000456075 TBC1D2Q9BYX2 928 aa12.42□□□□□ -0.42
TOP3B-212ENST00000456075 ZFYVE28Q9HCC9 887 aa12.42□□□□□ -0.42
TOP3B-212ENST00000456075 FOCADQ5VW36 1801 aa12.41□□□□□ -0.42
TOP3B-212ENST00000456075 MYH7P12883 1935 aa12.41□□□□□ -0.42
TOP3B-212ENST00000456075 USP17L5A8MUK1 530 aa12.41□□□□□ -0.42
TOP3B-212ENST00000456075 GPAA1O43292 621 aa12.41□□□□□ -0.42
TOP3B-212ENST00000456075 GDF11O95390 407 aa12.41□□□□□ -0.42
TOP3B-212ENST00000456075 GADL1Q6ZQY3 521 aa12.41□□□□□ -0.42
TOP3B-212ENST00000456075 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
TOP3B-212ENST00000456075 OSBP2Q969R2 916 aa12.41□□□□□ -0.42
TOP3B-212ENST00000456075 STRBPQ96SI9 672 aaKnown RBP12.41□□□□□ -0.42
TOP3B-212ENST00000456075 NACAP1Q9BZK3 213 aa12.41□□□□□ -0.42
TOP3B-212ENST00000456075 CABP5Q9NP86 173 aa12.41□□□□□ -0.42
TOP3B-212ENST00000456075 GINM1Q9NU53 330 aa12.41□□□□□ -0.42
TOP3B-212ENST00000456075 KCNH4Q9UQ05 1017 aa12.41□□□□□ -0.42
TOP3B-212ENST00000456075 NAV1Q8NEY1 1877 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 CDK5RAP2Q96SN8 1893 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 GPR25O00155 361 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 MPHOSPH10O00566 681 aaKnown RBP12.4□□□□□ -0.42
TOP3B-212ENST00000456075 TDO2P48775 406 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 PLCD1P51178 756 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 SPP2Q13103 211 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 CRHR2Q13324 411 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 CERKLQ49MI3 558 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-212ENST00000456075 CCDC84Q86UT8 332 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-212ENST00000456075 PLEKHM2Q8IWE5 1019 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 FAM43AQ8N2R8 423 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 ZNF280CQ8ND82 737 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 PTPN18Q99952 460 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 CFHR5Q9BXR6 569 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 DNAJC18Q9H819 358 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 ZCCHC17Q9NP64 241 aaKnown RBP12.4□□□□□ -0.42
TOP3B-212ENST00000456075 ARPP21Q9UBL0 812 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-212ENST00000456075 SWAP70Q9UH65 585 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 ZBTB21Q9ULJ3 1066 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 AFG3L2Q9Y4W6 797 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 MYH1P12882 1939 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 DOCK1Q14185 1865 aa12.4□□□□□ -0.42
TOP3B-212ENST00000456075 A0A0G2JLL6 359 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms