RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 KLHL34Q8N239 644 aa18.98■□□□□ 0.63
TMEM220-202ENST00000455996 TMTC2Q8N394 836 aa18.98■□□□□ 0.63
TMEM220-202ENST00000455996 TNPO1Q92973 898 aaKnown RBP18.98■□□□□ 0.63
TMEM220-202ENST00000455996 RCAN1P53805 252 aa18.97■□□□□ 0.63
TMEM220-202ENST00000455996 PKP1Q13835 747 aa18.97■□□□□ 0.63
TMEM220-202ENST00000455996 SEC23AQ15436 765 aa18.97■□□□□ 0.63
TMEM220-202ENST00000455996 NFKBIBQ15653 356 aa18.97■□□□□ 0.63
TMEM220-202ENST00000455996 AGBL3Q8NEM8 1001 aa18.97■□□□□ 0.63
TMEM220-202ENST00000455996 TOMM22Q9NS69 142 aa18.97■□□□□ 0.63
TMEM220-202ENST00000455996 ADAMTSL1Q8N6G6 1762 aa18.96■□□□□ 0.63
TMEM220-202ENST00000455996 POLR3DP05423 398 aaPredicted RBP18.96■□□□□ 0.63
TMEM220-202ENST00000455996 PLCD1P51178 756 aa18.96■□□□□ 0.63
TMEM220-202ENST00000455996 APOA5Q6Q788 366 aa18.96■□□□□ 0.63
TMEM220-202ENST00000455996 C16orf86Q6ZW13 317 aa18.96■□□□□ 0.63
TMEM220-202ENST00000455996 NSUN7Q8NE18 718 aaKnown RBP18.96■□□□□ 0.63
TMEM220-202ENST00000455996 IDI2Q9BXS1 227 aa18.96■□□□□ 0.63
TMEM220-202ENST00000455996 GOLGA8BA8MQT2 603 aa18.95■□□□□ 0.62
TMEM220-202ENST00000455996 RAD17O75943 681 aa18.95■□□□□ 0.62
TMEM220-202ENST00000455996 CTDNEP1O95476 244 aa18.95■□□□□ 0.62
TMEM220-202ENST00000455996 MMP14P50281 582 aa18.95■□□□□ 0.62
TMEM220-202ENST00000455996 WTAPQ15007 396 aa18.95■□□□□ 0.62
TMEM220-202ENST00000455996 STK11IPQ8N1F8 1099 aa18.95■□□□□ 0.62
TMEM220-202ENST00000455996 ZSCAN10Q96SZ4 725 aaPredicted RBP18.95■□□□□ 0.62
TMEM220-202ENST00000455996 UBAC1Q9BSL1 405 aa18.95■□□□□ 0.62
TMEM220-202ENST00000455996 ZNF287Q9HBT7 754 aa18.95■□□□□ 0.62
TMEM220-202ENST00000455996 SENP2Q9HC62 589 aa18.95■□□□□ 0.62
TMEM220-202ENST00000455996 DDX4Q9NQI0 724 aaKnown RBP18.95■□□□□ 0.62
TMEM220-202ENST00000455996 SAP30BPQ9UHR5 308 aaKnown RBP18.95■□□□□ 0.62
TMEM220-202ENST00000455996 TAOK2Q9UL54 1235 aa18.95■□□□□ 0.62
TMEM220-202ENST00000455996 WDR33Q9C0J8 1336 aaKnown RBP18.95■□□□□ 0.62
TMEM220-202ENST00000455996 ERICH2A1L162 156 aa18.94■□□□□ 0.62
TMEM220-202ENST00000455996 DHX16O60231 1041 aaKnown RBP18.94■□□□□ 0.62
TMEM220-202ENST00000455996 RANBP6O60518 1105 aaKnown RBP18.94■□□□□ 0.62
TMEM220-202ENST00000455996 PRDM1O75626 825 aa18.94■□□□□ 0.62
TMEM220-202ENST00000455996 PDCP20941 246 aa18.94■□□□□ 0.62
TMEM220-202ENST00000455996 SYT1P21579 422 aa18.94■□□□□ 0.62
TMEM220-202ENST00000455996 HMGN5P82970 282 aaKnown RBP18.94■□□□□ 0.62
TMEM220-202ENST00000455996 CXCL9Q07325 125 aa18.94■□□□□ 0.62
TMEM220-202ENST00000455996 CFAP100Q494V2 611 aa18.94■□□□□ 0.62
TMEM220-202ENST00000455996 IQCA1Q86XH1 822 aa18.94■□□□□ 0.62
TMEM220-202ENST00000455996 MTMR14Q8NCE2 650 aa18.94■□□□□ 0.62
TMEM220-202ENST00000455996 JDP2Q8WYK2 163 aa18.94■□□□□ 0.62
TMEM220-202ENST00000455996 TNKSO95271 1327 aa18.93■□□□□ 0.62
TMEM220-202ENST00000455996 CCT2P78371 535 aaKnown RBP18.93■□□□□ 0.62
TMEM220-202ENST00000455996 GABPAQ06546 454 aa18.93■□□□□ 0.62
TMEM220-202ENST00000455996 TTC6Q86TZ1 520 aa18.93■□□□□ 0.62
TMEM220-202ENST00000455996 ENAHQ8N8S7 591 aaPredicted RBP18.93■□□□□ 0.62
TMEM220-202ENST00000455996 DYNLL2Q96FJ2 89 aa18.93■□□□□ 0.62
TMEM220-202ENST00000455996 OSBPL5Q9H0X9 879 aaPredicted RBP18.93■□□□□ 0.62
TMEM220-202ENST00000455996 TCP11L1Q9NUJ3 509 aa18.93■□□□□ 0.62
TMEM220-202ENST00000455996 ZBTB43O43298 467 aa18.92■□□□□ 0.62
TMEM220-202ENST00000455996 STX6O43752 255 aa18.92■□□□□ 0.62
TMEM220-202ENST00000455996 JAK2O60674 1132 aa18.92■□□□□ 0.62
TMEM220-202ENST00000455996 CIAPIN1Q6FI81 312 aa18.92■□□□□ 0.62
TMEM220-202ENST00000455996 ANKS1AQ92625 1134 aa18.92■□□□□ 0.62
TMEM220-202ENST00000455996 NCOA5Q9HCD5 579 aaKnown RBP18.92■□□□□ 0.62
TMEM220-202ENST00000455996 HDAC9Q9UKV0 1011 aa18.92■□□□□ 0.62
TMEM220-202ENST00000455996 PCDHAC2Q9Y5I4 1007 aa18.92■□□□□ 0.62
TMEM220-202ENST00000455996 SLC12A7Q9Y666 1083 aa18.92■□□□□ 0.62
TMEM220-202ENST00000455996 ECM29Q5VYK3 1845 aa18.92■□□□□ 0.62
TMEM220-202ENST00000455996 COL2A1P02458 1487 aaPredicted RBP18.92■□□□□ 0.62
TMEM220-202ENST00000455996 PTPDC1A2A3K4 754 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 CCDC69A6NI79 296 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 RASA1P20936 1047 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 MCM4P33991 863 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 CDK8P49336 464 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 METAP2P50579 478 aaKnown RBP eCLIP18.91■□□□□ 0.62
TMEM220-202ENST00000455996 PRELPP51888 382 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 NFIAQ12857 509 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 TNIP1Q15025 636 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 CCDC178Q5BJE1 867 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 NFXL1Q6ZNB6 911 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 GBP4Q96PP9 640 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 ZKSCAN3Q9BRR0 538 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 NAP1L2Q9ULW6 460 aaPredicted RBP18.91■□□□□ 0.62
TMEM220-202ENST00000455996 MYH1P12882 1939 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 SPDYE2BA6NHP3 402 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 FZD9O00144 591 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 SPDYE6P0CI01 402 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 ZSCAN22P10073 491 aaPredicted RBP18.91■□□□□ 0.62
TMEM220-202ENST00000455996 RPS12P25398 132 aaKnown RBP18.91■□□□□ 0.62
TMEM220-202ENST00000455996 RBM5P52756 815 aaKnown RBP eCLIP18.91■□□□□ 0.62
TMEM220-202ENST00000455996 PICALMQ13492 652 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 ZBED3Q96IU2 234 aaPredicted RBP18.91■□□□□ 0.62
TMEM220-202ENST00000455996 FHDC1Q9C0D6 1143 aaPredicted RBP18.91■□□□□ 0.62
TMEM220-202ENST00000455996 EHD4Q9H223 541 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 MKNK2Q9HBH9 465 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 FAM217BQ9NTX9 383 aaPredicted RBP18.91■□□□□ 0.62
TMEM220-202ENST00000455996 FAM198AQ9UFP1 575 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 MTMR6Q9Y217 621 aa18.91■□□□□ 0.62
TMEM220-202ENST00000455996 TSPY2A6NKD2 308 aa18.9■□□□□ 0.62
TMEM220-202ENST00000455996 ENTPD3O75355 529 aa18.9■□□□□ 0.62
TMEM220-202ENST00000455996 TFAP4Q01664 338 aa18.9■□□□□ 0.62
TMEM220-202ENST00000455996 RASSF7Q02833 373 aa18.9■□□□□ 0.62
TMEM220-202ENST00000455996 PPP2R5BQ15173 497 aa18.9■□□□□ 0.62
TMEM220-202ENST00000455996 FAM47AQ5JRC9 791 aa18.9■□□□□ 0.62
TMEM220-202ENST00000455996 SYNE3Q6ZMZ3 975 aa18.9■□□□□ 0.62
TMEM220-202ENST00000455996 OGFOD1Q8N543 542 aa18.9■□□□□ 0.62
TMEM220-202ENST00000455996 SLC44A5Q8NCS7 719 aa18.9■□□□□ 0.62
TMEM220-202ENST00000455996 RGS22Q8NE09 1264 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms