RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 TUT1Q9H6E5 874 aaKnown RBP4.8□□□□□ -1.64
LINC02540-201ENST00000455554 ARNTP27540 789 aa4.79□□□□□ -1.64
LINC02540-201ENST00000455554 NTF4P34130 210 aa4.79□□□□□ -1.64
LINC02540-201ENST00000455554 MAP1SQ66K74 1059 aaPredicted RBP4.79□□□□□ -1.64
LINC02540-201ENST00000455554 GLYCTKQ8IVS8 523 aa4.79□□□□□ -1.64
LINC02540-201ENST00000455554 FBXO15Q8NCQ5 510 aaPredicted RBP4.79□□□□□ -1.64
LINC02540-201ENST00000455554 CARS2Q9HA77 564 aaKnown RBP4.79□□□□□ -1.64
LINC02540-201ENST00000455554 PPP1R15AO75807 674 aaPredicted RBP4.78□□□□□ -1.64
LINC02540-201ENST00000455554 FCGRTP55899 365 aa4.78□□□□□ -1.64
LINC02540-201ENST00000455554 PPM1JQ5JR12 505 aa4.78□□□□□ -1.64
LINC02540-201ENST00000455554 AMIGO3Q86WK7 504 aa4.78□□□□□ -1.64
LINC02540-201ENST00000455554 GPBAR1Q8TDU6 330 aa4.78□□□□□ -1.64
LINC02540-201ENST00000455554 ACSBG1Q96GR2 724 aa4.78□□□□□ -1.64
LINC02540-201ENST00000455554 CITED4Q96RK1 184 aa4.78□□□□□ -1.64
LINC02540-201ENST00000455554 DIRC2Q96SL1 478 aa4.78□□□□□ -1.64
LINC02540-201ENST00000455554 EMILIN2Q9BXX0 1053 aa4.78□□□□□ -1.64
LINC02540-201ENST00000455554 FOXQ1Q9C009 403 aa4.78□□□□□ -1.64
LINC02540-201ENST00000455554 NSUN3Q9H649 340 aaKnown RBP4.78□□□□□ -1.64
LINC02540-201ENST00000455554 PRDM5Q9NQX1 630 aaPredicted RBP4.78□□□□□ -1.64
LINC02540-201ENST00000455554 PRR33A8MZF0 331 aa4.77□□□□□ -1.65
LINC02540-201ENST00000455554 NPIPB6E9PJ23 425 aa4.77□□□□□ -1.65
LINC02540-201ENST00000455554 EOMESO95936 686 aa4.77□□□□□ -1.65
LINC02540-201ENST00000455554 IGHA2P01877 340 aa4.77□□□□□ -1.65
LINC02540-201ENST00000455554 XRCC5P13010 732 aaKnown RBP4.77□□□□□ -1.65
LINC02540-201ENST00000455554 GDNFP39905 211 aa4.77□□□□□ -1.65
LINC02540-201ENST00000455554 ARHGAP4P98171 946 aa4.77□□□□□ -1.65
LINC02540-201ENST00000455554 EPS8L3Q8TE67 593 aaKnown RBP4.77□□□□□ -1.65
LINC02540-201ENST00000455554 NIF3L1Q9GZT8 377 aa4.77□□□□□ -1.65
LINC02540-201ENST00000455554 PICK1Q9NRD5 415 aa4.77□□□□□ -1.65
LINC02540-201ENST00000455554 PPP4R2Q9NY27 417 aa4.77□□□□□ -1.65
LINC02540-201ENST00000455554 MAPK8IP1Q9UQF2 711 aa4.77□□□□□ -1.65
LINC02540-201ENST00000455554 CSADQ9Y600 493 aa4.77□□□□□ -1.65
LINC02540-201ENST00000455554 FAM155AB1AL88 458 aaPredicted RBP4.76□□□□□ -1.65
LINC02540-201ENST00000455554 GPR182O15218 404 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 INHBBP09529 407 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 TMEM253P0C7T8 217 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 NME2P22392 152 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 ZNF252P-AS1Q0IIN9 211 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 PI16Q6UXB8 463 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 NPAS4Q8IUM7 802 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 TMC1Q8TDI8 760 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 C20orf173Q96LM9 149 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 HSPA12BQ96MM6 686 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 CSRNP1Q96S65 589 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 ATP13A1Q9HD20 1204 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 SEMA3GQ9NS98 782 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 CACNA2D2Q9NY47 1150 aa4.76□□□□□ -1.65
LINC02540-201ENST00000455554 FANCGO15287 622 aa4.75□□□□□ -1.65
LINC02540-201ENST00000455554 SERPINB4P48594 390 aa4.75□□□□□ -1.65
LINC02540-201ENST00000455554 KCNA10Q16322 511 aa4.75□□□□□ -1.65
LINC02540-201ENST00000455554 CIAPIN1Q6FI81 312 aa4.75□□□□□ -1.65
LINC02540-201ENST00000455554 CDC37L1Q7L3B6 337 aa4.75□□□□□ -1.65
LINC02540-201ENST00000455554 ARMCX6Q7L4S7 300 aa4.75□□□□□ -1.65
LINC02540-201ENST00000455554 CCDC120Q96HB5 630 aa4.75□□□□□ -1.65
LINC02540-201ENST00000455554 EPB41L4BQ9H329 900 aa4.75□□□□□ -1.65
LINC02540-201ENST00000455554 CBX8Q9HC52 389 aa4.75□□□□□ -1.65
LINC02540-201ENST00000455554 CD320Q9NPF0 282 aa4.75□□□□□ -1.65
LINC02540-201ENST00000455554 DCP1AQ9NPI6 582 aaPredicted RBP4.75□□□□□ -1.65
LINC02540-201ENST00000455554 NLRP2Q9NX02 1062 aa4.75□□□□□ -1.65
LINC02540-201ENST00000455554 TCAF2A6NFQ2 919 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 ARID3CA6NKF2 412 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 DCDC2CA8MYV0 355 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 MED14OSP0DP75 135 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 RING1Q06587 406 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 ZBTB37Q5TC79 503 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 CDKAL1Q5VV42 579 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 B4GALNT3Q6L9W6 998 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 ATG14Q6ZNE5 492 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 C12orf40Q86WS4 652 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 MFSD4AQ8N468 514 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 KCT2Q8NC54 265 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 AKAP2Q9Y2D5 859 aa4.74□□□□□ -1.65
LINC02540-201ENST00000455554 H3BS24 57 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 LRIG2O94898 1065 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 RAC2P15153 192 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 GLDCP23378 1020 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 CTSWP56202 376 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 RASIP1Q5U651 963 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 C22orf34Q6ZV56 151 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 GRIN3AQ8TCU5 1115 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 ALKBH8Q96BT7 664 aaKnown RBP4.73□□□□□ -1.65
LINC02540-201ENST00000455554 DMRTB1Q96MA1 342 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 ALPK1Q96QP1 1244 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 BCO2Q9BYV7 579 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 TPX2Q9ULW0 747 aaKnown RBP4.73□□□□□ -1.65
LINC02540-201ENST00000455554 JAG2Q9Y219 1238 aa4.73□□□□□ -1.65
LINC02540-201ENST00000455554 TRIM37O94972 964 aa4.72□□□□□ -1.65
LINC02540-201ENST00000455554 SLITRK5O94991 958 aa4.72□□□□□ -1.65
LINC02540-201ENST00000455554 ERVFC1P60507 584 aa4.72□□□□□ -1.65
LINC02540-201ENST00000455554 SFRP5Q5T4F7 317 aa4.72□□□□□ -1.65
LINC02540-201ENST00000455554 ABHD4Q8TB40 342 aa4.72□□□□□ -1.65
LINC02540-201ENST00000455554 SAMM50Q9Y512 469 aa4.72□□□□□ -1.65
LINC02540-201ENST00000455554 ETV2O00321 342 aaPredicted RBP4.71□□□□□ -1.66
LINC02540-201ENST00000455554 NUAK1O60285 661 aa4.71□□□□□ -1.66
LINC02540-201ENST00000455554 HOXA5P20719 270 aa4.71□□□□□ -1.66
LINC02540-201ENST00000455554 FGD1P98174 961 aa4.71□□□□□ -1.66
LINC02540-201ENST00000455554 THAP5Q7Z6K1 395 aa4.71□□□□□ -1.66
LINC02540-201ENST00000455554 TTC6Q86TZ1 520 aa4.71□□□□□ -1.66
LINC02540-201ENST00000455554 CCDC82Q8N4S0 544 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms