RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 FGAP02671 866 aa17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 NT5C2P49902 561 aa17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 PLCD1P51178 756 aa17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 GABPAQ06546 454 aa17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 FMR1Q06787 632 aaKnown RBP eCLIP17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 LDLRAD1Q5T700 205 aa17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 CRACR2BQ8N4Y2 399 aaPredicted RBP17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 KLRG1Q96E93 195 aa17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 IL25Q9H293 177 aa17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 GINM1Q9NU53 330 aa17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 ANAPC4Q9UJX5 808 aa17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 MYH7P12883 1935 aa17.05■□□□□ 0.32
HMGXB4-204ENST00000455359 SSC5DA1L4H1 1573 aa17.04■□□□□ 0.32
HMGXB4-204ENST00000455359 MAP3K9P80192 1104 aa17.04■□□□□ 0.32
HMGXB4-204ENST00000455359 TTLL12Q14166 644 aaPredicted RBP17.04■□□□□ 0.32
HMGXB4-204ENST00000455359 TATDN1Q6P1N9 297 aa17.04■□□□□ 0.32
HMGXB4-204ENST00000455359 MIGA2Q7L4E1 593 aa17.04■□□□□ 0.32
HMGXB4-204ENST00000455359 SAPCD2Q86UD0 394 aa17.04■□□□□ 0.32
HMGXB4-204ENST00000455359 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.04■□□□□ 0.32
HMGXB4-204ENST00000455359 MAP4K1Q92918 833 aa17.04■□□□□ 0.32
HMGXB4-204ENST00000455359 ANGEL1Q9UNK9 670 aaKnown RBP17.04■□□□□ 0.32
HMGXB4-204ENST00000455359 TLL2Q9Y6L7 1015 aa17.04■□□□□ 0.32
HMGXB4-204ENST00000455359 U3KPZ7 1027 aaPredicted RBP17.04■□□□□ 0.32
HMGXB4-204ENST00000455359 ROBO3Q96MS0 1386 aa17.03■□□□□ 0.32
HMGXB4-204ENST00000455359 CTNND1O60716 968 aaKnown RBP17.03■□□□□ 0.32
HMGXB4-204ENST00000455359 REC8O95072 547 aa17.03■□□□□ 0.32
HMGXB4-204ENST00000455359 PCP11498 1178 aaKnown RBP17.03■□□□□ 0.32
HMGXB4-204ENST00000455359 ANKRD13AQ8IZ07 590 aa17.03■□□□□ 0.32
HMGXB4-204ENST00000455359 PHF20L1A8MW92 1017 aa17.02■□□□□ 0.32
HMGXB4-204ENST00000455359 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.32
HMGXB4-204ENST00000455359 CYP2D6P10635 497 aa17.02■□□□□ 0.32
HMGXB4-204ENST00000455359 HSPA6P17066 643 aa17.02■□□□□ 0.32
HMGXB4-204ENST00000455359 PPARAQ07869 468 aa17.02■□□□□ 0.32
HMGXB4-204ENST00000455359 NOL9Q5SY16 702 aaKnown RBP17.02■□□□□ 0.32
HMGXB4-204ENST00000455359 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.32
HMGXB4-204ENST00000455359 WRNIP1Q96S55 665 aa17.02■□□□□ 0.32
HMGXB4-204ENST00000455359 LSG1Q9H089 658 aaKnown RBP17.02■□□□□ 0.32
HMGXB4-204ENST00000455359 ANO2Q9NQ90 1003 aa17.02■□□□□ 0.32
HMGXB4-204ENST00000455359 HUNKP57058 714 aa17.01■□□□□ 0.31
HMGXB4-204ENST00000455359 PDE4BQ07343 736 aa17.01■□□□□ 0.31
HMGXB4-204ENST00000455359 IMMTQ16891 758 aaKnown RBP17.01■□□□□ 0.31
HMGXB4-204ENST00000455359 CCDC17Q96LX7 622 aa17.01■□□□□ 0.31
HMGXB4-204ENST00000455359 DNAJC18Q9H819 358 aa17.01■□□□□ 0.31
HMGXB4-204ENST00000455359 ABT1Q9ULW3 272 aaKnown RBP17.01■□□□□ 0.31
HMGXB4-204ENST00000455359 CSADQ9Y600 493 aa17.01■□□□□ 0.31
HMGXB4-204ENST00000455359 PAPPA2Q9BXP8 1791 aa17■□□□□ 0.31
HMGXB4-204ENST00000455359 UBE2Q2LH0YL09 131 aa17■□□□□ 0.31
HMGXB4-204ENST00000455359 ZNF213O14771 459 aa17■□□□□ 0.31
HMGXB4-204ENST00000455359 FGRP09769 529 aa17■□□□□ 0.31
HMGXB4-204ENST00000455359 SHMT1P34896 483 aa17■□□□□ 0.31
HMGXB4-204ENST00000455359 PRKG1Q13976 671 aa17■□□□□ 0.31
HMGXB4-204ENST00000455359 RNF41Q9H4P4 317 aaPredicted RBP17■□□□□ 0.31
HMGXB4-204ENST00000455359 CYP2D7A0A087X1C5 515 aa16.99■□□□□ 0.31
HMGXB4-204ENST00000455359 RASSF10A6NK89 507 aa16.99■□□□□ 0.31
HMGXB4-204ENST00000455359 CDK8P49336 464 aa16.99■□□□□ 0.31
HMGXB4-204ENST00000455359 PTH1RQ03431 593 aa16.99■□□□□ 0.31
HMGXB4-204ENST00000455359 CERKLQ49MI3 558 aaPredicted RBP16.99■□□□□ 0.31
HMGXB4-204ENST00000455359 RGMBQ6NW40 437 aa16.99■□□□□ 0.31
HMGXB4-204ENST00000455359 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.99■□□□□ 0.31
HMGXB4-204ENST00000455359 MOB2Q70IA6 237 aa16.99■□□□□ 0.31
HMGXB4-204ENST00000455359 SCYL3Q8IZE3 742 aa16.99■□□□□ 0.31
HMGXB4-204ENST00000455359 POLR2AP24928 1970 aaKnown RBP16.99■□□□□ 0.31
HMGXB4-204ENST00000455359 ORC4O43929 436 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 ASNSP08243 561 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 INPP5BP32019 993 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 CAP2P40123 477 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 VGLL4Q14135 290 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 SLC4A8Q2Y0W8 1093 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 STAG1Q8WVM7 1258 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 CCDC102AQ96A19 550 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 SLC10A4Q96EP9 437 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 TBC1D2Q9BYX2 928 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 MKNK2Q9HBH9 465 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 PICK1Q9NRD5 415 aa16.98■□□□□ 0.31
HMGXB4-204ENST00000455359 FOCADQ5VW36 1801 aa16.97■□□□□ 0.31
HMGXB4-204ENST00000455359 AKNAD1Q5T1N1 836 aa16.97■□□□□ 0.31
HMGXB4-204ENST00000455359 RNF20Q5VTR2 975 aa16.97■□□□□ 0.31
HMGXB4-204ENST00000455359 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
HMGXB4-204ENST00000455359 CABP5Q9NP86 173 aa16.97■□□□□ 0.31
HMGXB4-204ENST00000455359 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.97■□□□□ 0.31
HMGXB4-204ENST00000455359 RBM8AQ9Y5S9 174 aaKnown RBP16.97■□□□□ 0.31
HMGXB4-204ENST00000455359 AK9Q5TCS8 1911 aa16.97■□□□□ 0.31
HMGXB4-204ENST00000455359 DDX60LQ5H9U9 1706 aaKnown RBP16.97■□□□□ 0.31
HMGXB4-204ENST00000455359 SPDYE5A6NIY4 337 aa16.96■□□□□ 0.31
HMGXB4-204ENST00000455359 FAM196BA6NMK8 535 aa16.96■□□□□ 0.31
HMGXB4-204ENST00000455359 ECE1P42892 770 aa16.96■□□□□ 0.31
HMGXB4-204ENST00000455359 ABCB5Q2M3G0 1257 aa16.96■□□□□ 0.31
HMGXB4-204ENST00000455359 DEFB115Q30KQ5 88 aa16.96■□□□□ 0.31
HMGXB4-204ENST00000455359 MFSD6Q6ZSS7 791 aa16.96■□□□□ 0.31
HMGXB4-204ENST00000455359 ERO1BQ86YB8 467 aa16.96■□□□□ 0.31
HMGXB4-204ENST00000455359 ZNF444Q8N0Y2 327 aaPredicted RBP16.96■□□□□ 0.31
HMGXB4-204ENST00000455359 ZKSCAN4Q969J2 545 aaPredicted RBP16.96■□□□□ 0.31
HMGXB4-204ENST00000455359 FZD1Q9UP38 647 aa16.96■□□□□ 0.31
HMGXB4-204ENST00000455359 SNCAIPQ9Y6H5 919 aa16.96■□□□□ 0.31
HMGXB4-204ENST00000455359 ZBTB48P10074 688 aaPredicted RBP16.96■□□□□ 0.3
HMGXB4-204ENST00000455359 ZNF157P51786 506 aaPredicted RBP16.96■□□□□ 0.3
HMGXB4-204ENST00000455359 EVX2Q03828 476 aa16.96■□□□□ 0.3
HMGXB4-204ENST00000455359 PPATQ06203 517 aa16.96■□□□□ 0.3
HMGXB4-204ENST00000455359 NECTIN1Q15223 517 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms