RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 GTF2A1P52655 376 aaPredicted RBP12.76□□□□□ -0.37
DDR1-240ENST00000454612 PUM3Q15397 648 aaKnown RBP12.76□□□□□ -0.37
DDR1-240ENST00000454612 APOA5Q6Q788 366 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 PIK3AP1Q6ZUJ8 805 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 LRRC8AQ8IWT6 810 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 DRC1Q96MC2 740 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 EPC1Q9H2F5 836 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 CPVLQ9H3G5 476 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 CWC15Q9P013 229 aaKnown RBP12.76□□□□□ -0.37
DDR1-240ENST00000454612 NFE2L3Q9Y4A8 694 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 TCHHQ07283 1943 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 GUCY1A2P33402 732 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 RASGRF1Q13972 1273 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 GIGYF2Q6Y7W6 1299 aaKnown RBP12.76□□□□□ -0.37
DDR1-240ENST00000454612 HEATR3Q7Z4Q2 680 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 ZSCAN29Q8IWY8 852 aaPredicted RBP12.76□□□□□ -0.37
DDR1-240ENST00000454612 N4BP3O15049 544 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 KCNQ2O43526 872 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 GOLGA8HP0CJ92 632 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 SUSD4Q5VX71 490 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 ADALQ6DHV7 355 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 LINC00301Q8NCQ3 95 aa12.76□□□□□ -0.37
DDR1-240ENST00000454612 KDM3BQ7LBC6 1761 aa12.75□□□□□ -0.37
DDR1-240ENST00000454612 AFF2P51816 1311 aa12.75□□□□□ -0.37
DDR1-240ENST00000454612 RIMBP2O15034 1052 aa12.75□□□□□ -0.37
DDR1-240ENST00000454612 ESR2Q92731 530 aa12.75□□□□□ -0.37
DDR1-240ENST00000454612 LLPHQ9BRT6 129 aaKnown RBP12.75□□□□□ -0.37
DDR1-240ENST00000454612 ERVV-2B6SEH9 535 aa12.75□□□□□ -0.37
DDR1-240ENST00000454612 ZNF274Q96GC6 653 aaPredicted RBP12.75□□□□□ -0.37
DDR1-240ENST00000454612 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
DDR1-240ENST00000454612 DEF6Q9H4E7 631 aa12.75□□□□□ -0.37
DDR1-240ENST00000454612 ATG3Q9NT62 314 aa12.75□□□□□ -0.37
DDR1-240ENST00000454612 RCOR1Q9UKL0 485 aa12.75□□□□□ -0.37
DDR1-240ENST00000454612 NMT2O60551 498 aa12.75□□□□□ -0.37
DDR1-240ENST00000454612 IPO7O95373 1038 aaKnown RBP12.75□□□□□ -0.37
DDR1-240ENST00000454612 EIF5P55010 431 aaKnown RBP12.75□□□□□ -0.37
DDR1-240ENST00000454612 ZNF444Q8N0Y2 327 aaPredicted RBP12.75□□□□□ -0.37
DDR1-240ENST00000454612 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
DDR1-240ENST00000454612 CAGE1Q8TC20 777 aa12.75□□□□□ -0.37
DDR1-240ENST00000454612 LPIN2Q92539 896 aa12.75□□□□□ -0.37
DDR1-240ENST00000454612 COL16A1Q07092 1604 aaPredicted RBP12.75□□□□□ -0.37
DDR1-240ENST00000454612 UTYO14607 1347 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 CCDC196A0A1B0GTZ2 297 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 TRIM75PA6NK02 468 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 PHACTR2O75167 634 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 FDPSP14324 419 aaKnown RBP12.74□□□□□ -0.37
DDR1-240ENST00000454612 MATR3P43243 847 aaKnown RBP eCLIP12.74□□□□□ -0.37
DDR1-240ENST00000454612 WASF1Q92558 559 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 FAM205CA6NFA0 338 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 CBFA2T2O43439 604 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 PCCAP05165 728 aaPredicted RBP12.74□□□□□ -0.37
DDR1-240ENST00000454612 TMEM87AQ8NBN3 555 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 GPKOWQ92917 476 aaPredicted RBP eCLIP12.74□□□□□ -0.37
DDR1-240ENST00000454612 CARD6Q9BX69 1037 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 CCDC194A0A1B0GVG4 234 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 GNPATO15228 680 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 CHRNDQ07001 517 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 AKNAD1Q5T1N1 836 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 OXER1Q8TDS5 423 aa12.74□□□□□ -0.37
DDR1-240ENST00000454612 CDCA7Q9BWT1 371 aaPredicted RBP12.74□□□□□ -0.37
DDR1-240ENST00000454612 ARGLU1Q9NWB6 273 aaPredicted RBP12.74□□□□□ -0.37
DDR1-240ENST00000454612 NEDD4P46934 1319 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 MAP3K15Q6ZN16 1313 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 MYL5Q02045 173 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 KIF23Q02241 960 aaPredicted RBP12.73□□□□□ -0.37
DDR1-240ENST00000454612 KCNB2Q92953 911 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 PLEKHA4Q9H4M7 779 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 PCDHB6Q9Y5E3 794 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
DDR1-240ENST00000454612 TMEM232C9JQI7 657 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 WDHD1O75717 1129 aaPredicted RBP12.73□□□□□ -0.37
DDR1-240ENST00000454612 TXLNAP40222 546 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 DHX37Q8IY37 1157 aaKnown RBP12.73□□□□□ -0.37
DDR1-240ENST00000454612 C10orf67Q8IYJ2 551 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 KRT23Q9C075 422 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 TSPYL1Q9H0U9 437 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 RNF41Q9H4P4 317 aaPredicted RBP12.73□□□□□ -0.37
DDR1-240ENST00000454612 SPATA31A1Q5TZJ5 1347 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 CASQ1P31415 396 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 USP49Q70CQ1 688 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 BRAPQ7Z569 592 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 CDK5RAP3Q96JB5 506 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 GDAP1L1Q96MZ0 367 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 SETDB2Q96T68 719 aa12.73□□□□□ -0.37
DDR1-240ENST00000454612 NCAPD2Q15021 1401 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 ADD2P35612 726 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 SETQ01105 290 aaPredicted RBP12.72□□□□□ -0.37
DDR1-240ENST00000454612 MCM6Q14566 821 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 ZNF654Q8IZM8 581 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 EPSTI1Q96J88 318 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 SRP68Q9UHB9 627 aaKnown RBP12.72□□□□□ -0.37
DDR1-240ENST00000454612 OVOS2A0A0G2JMS6 1433 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 IBSPP21815 317 aaPredicted RBP12.72□□□□□ -0.37
DDR1-240ENST00000454612 CRKLP46109 303 aaKnown RBP12.72□□□□□ -0.37
DDR1-240ENST00000454612 GSDMDP57764 484 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 GRIN1Q05586 938 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 KRT222Q8N1A0 295 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 NLRP3Q96P20 1036 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms