RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 PTPN22Q9Y2R2 807 aa13.11□□□□□ -0.31
LMCD1-205ENST00000454244 AFG3L2Q9Y4W6 797 aa13.11□□□□□ -0.31
LMCD1-205ENST00000454244 A0A0G2JLL6 359 aaPredicted RBP13.1□□□□□ -0.31
LMCD1-205ENST00000454244 TRIM75PA6NK02 468 aa13.1□□□□□ -0.31
LMCD1-205ENST00000454244 CAP2P40123 477 aa13.1□□□□□ -0.31
LMCD1-205ENST00000454244 RRP1BQ14684 758 aaKnown RBP13.1□□□□□ -0.31
LMCD1-205ENST00000454244 ARHGEF6Q15052 776 aa13.1□□□□□ -0.31
LMCD1-205ENST00000454244 TTF1Q15361 905 aaPredicted RBP13.1□□□□□ -0.31
LMCD1-205ENST00000454244 GADL1Q6ZQY3 521 aa13.1□□□□□ -0.31
LMCD1-205ENST00000454244 FASTKD5Q7L8L6 764 aaKnown RBP13.1□□□□□ -0.31
LMCD1-205ENST00000454244 PRRT2Q7Z6L0 340 aaPredicted RBP13.1□□□□□ -0.31
LMCD1-205ENST00000454244 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.1□□□□□ -0.31
LMCD1-205ENST00000454244 DNAJC2Q99543 621 aaKnown RBP13.1□□□□□ -0.31
LMCD1-205ENST00000454244 SAP30BPQ9UHR5 308 aaKnown RBP13.1□□□□□ -0.31
LMCD1-205ENST00000454244 PALD1Q9ULE6 856 aa13.1□□□□□ -0.31
LMCD1-205ENST00000454244 DOCK2Q92608 1830 aa13.1□□□□□ -0.31
LMCD1-205ENST00000454244 GOLIM4O00461 696 aa13.09□□□□□ -0.31
LMCD1-205ENST00000454244 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
LMCD1-205ENST00000454244 USP5P45974 858 aa13.09□□□□□ -0.31
LMCD1-205ENST00000454244 KIF22Q14807 665 aa13.09□□□□□ -0.31
LMCD1-205ENST00000454244 C17orf99Q6UX52 265 aa13.09□□□□□ -0.31
LMCD1-205ENST00000454244 CERS3Q8IU89 383 aa13.09□□□□□ -0.31
LMCD1-205ENST00000454244 FOXP4Q8IVH2 680 aaPredicted RBP13.09□□□□□ -0.31
LMCD1-205ENST00000454244 CRACR2BQ8N4Y2 399 aaPredicted RBP13.09□□□□□ -0.31
LMCD1-205ENST00000454244 PARK7Q99497 189 aaKnown RBP13.09□□□□□ -0.31
LMCD1-205ENST00000454244 ARHGAP39Q9C0H5 1083 aa13.09□□□□□ -0.31
LMCD1-205ENST00000454244 MAST2Q6P0Q8 1798 aa13.09□□□□□ -0.31
LMCD1-205ENST00000454244 ADGRA2Q96PE1 1338 aa13.09□□□□□ -0.31
LMCD1-205ENST00000454244 HLA-DOAP06340 250 aa13.08□□□□□ -0.32
LMCD1-205ENST00000454244 CYP2C8P10632 490 aa13.08□□□□□ -0.32
LMCD1-205ENST00000454244 PDE6AP16499 860 aa13.08□□□□□ -0.32
LMCD1-205ENST00000454244 LACTBP83111 547 aaPredicted RBP13.08□□□□□ -0.32
LMCD1-205ENST00000454244 SPP2Q13103 211 aa13.08□□□□□ -0.32
LMCD1-205ENST00000454244 SLC4A8Q2Y0W8 1093 aa13.08□□□□□ -0.32
LMCD1-205ENST00000454244 TMED8Q6PL24 325 aaPredicted RBP13.08□□□□□ -0.32
LMCD1-205ENST00000454244 EDC3Q96F86 508 aaKnown RBP13.08□□□□□ -0.32
LMCD1-205ENST00000454244 TRIM34Q9BYJ4 488 aa13.08□□□□□ -0.32
LMCD1-205ENST00000454244 LRRCC1Q9C099 1032 aa13.08□□□□□ -0.32
LMCD1-205ENST00000454244 BOLA2Q9H3K6 86 aa13.08□□□□□ -0.32
LMCD1-205ENST00000454244 DNAJC18Q9H819 358 aa13.08□□□□□ -0.32
LMCD1-205ENST00000454244 USP17L5A8MUK1 530 aa13.07□□□□□ -0.32
LMCD1-205ENST00000454244 SMARCA5O60264 1052 aaPredicted RBP13.07□□□□□ -0.32
LMCD1-205ENST00000454244 SLC9C2Q5TAH2 1124 aa13.07□□□□□ -0.32
LMCD1-205ENST00000454244 METTL16Q86W50 562 aaKnown RBP13.07□□□□□ -0.32
LMCD1-205ENST00000454244 ZNF280CQ8ND82 737 aa13.07□□□□□ -0.32
LMCD1-205ENST00000454244 YTHDC1Q96MU7 727 aaKnown RBP13.07□□□□□ -0.32
LMCD1-205ENST00000454244 RIOK1Q9BRS2 568 aaKnown RBP13.07□□□□□ -0.32
LMCD1-205ENST00000454244 PTCH2Q9Y6C5 1203 aa13.07□□□□□ -0.32
LMCD1-205ENST00000454244 MAGEB6P1A0A0J9YX57 407 aa13.06□□□□□ -0.32
LMCD1-205ENST00000454244 ATP5JP18859 108 aa13.06□□□□□ -0.32
LMCD1-205ENST00000454244 PSMC4P43686 418 aa13.06□□□□□ -0.32
LMCD1-205ENST00000454244 JAG1P78504 1218 aa13.06□□□□□ -0.32
LMCD1-205ENST00000454244 TBC1D2Q9BYX2 928 aa13.06□□□□□ -0.32
LMCD1-205ENST00000454244 AS3MTQ9HBK9 375 aa13.06□□□□□ -0.32
LMCD1-205ENST00000454244 PAG1Q9NWQ8 432 aa13.06□□□□□ -0.32
LMCD1-205ENST00000454244 AGTPBP1Q9UPW5 1226 aa13.06□□□□□ -0.32
LMCD1-205ENST00000454244 SLC45A1Q9Y2W3 748 aa13.06□□□□□ -0.32
LMCD1-205ENST00000454244 ZNF532Q9HCE3 1301 aa13.06□□□□□ -0.32
LMCD1-205ENST00000454244 GDF11O95390 407 aa13.05□□□□□ -0.32
LMCD1-205ENST00000454244 ASNSP08243 561 aa13.05□□□□□ -0.32
LMCD1-205ENST00000454244 BCRP11274 1271 aa13.05□□□□□ -0.32
LMCD1-205ENST00000454244 CTGFP29279 349 aa13.05□□□□□ -0.32
LMCD1-205ENST00000454244 HMGCS2P54868 508 aa13.05□□□□□ -0.32
LMCD1-205ENST00000454244 RRP1P56182 461 aaKnown RBP13.05□□□□□ -0.32
LMCD1-205ENST00000454244 SHROOM1Q2M3G4 852 aaPredicted RBP13.05□□□□□ -0.32
LMCD1-205ENST00000454244 TREML2Q5T2D2 321 aa13.05□□□□□ -0.32
LMCD1-205ENST00000454244 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
LMCD1-205ENST00000454244 HAUS7Q99871 368 aa13.05□□□□□ -0.32
LMCD1-205ENST00000454244 DCTPP1Q9H773 170 aa13.05□□□□□ -0.32
LMCD1-205ENST00000454244 DOCK1Q14185 1865 aa13.04□□□□□ -0.32
LMCD1-205ENST00000454244 TCRBV5S4A2TA0A5A2 114 aa13.04□□□□□ -0.32
LMCD1-205ENST00000454244 FMNL1O95466 1100 aaPredicted RBP13.04□□□□□ -0.32
LMCD1-205ENST00000454244 GNRH1P01148 92 aa13.04□□□□□ -0.32
LMCD1-205ENST00000454244 SLFNL1Q499Z3 407 aa13.04□□□□□ -0.32
LMCD1-205ENST00000454244 SLC9C1Q4G0N8 1177 aa13.04□□□□□ -0.32
LMCD1-205ENST00000454244 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
LMCD1-205ENST00000454244 PROCA1Q8NCQ7 364 aaPredicted RBP13.04□□□□□ -0.32
LMCD1-205ENST00000454244 SMCR8Q8TEV9 937 aaPredicted RBP13.04□□□□□ -0.32
LMCD1-205ENST00000454244 TRIM47Q96LD4 638 aa13.04□□□□□ -0.32
LMCD1-205ENST00000454244 WDR18Q9BV38 432 aa13.04□□□□□ -0.32
LMCD1-205ENST00000454244 CRNKL1Q9BZJ0 848 aaKnown RBP13.04□□□□□ -0.32
LMCD1-205ENST00000454244 SERPINB13Q9UIV8 391 aa13.04□□□□□ -0.32
LMCD1-205ENST00000454244 ZBTB21Q9ULJ3 1066 aa13.04□□□□□ -0.32
LMCD1-205ENST00000454244 PCDHB15Q9Y5E8 787 aa13.04□□□□□ -0.32
LMCD1-205ENST00000454244 MYO5AQ9Y4I1 1855 aaKnown RBP13.04□□□□□ -0.32
LMCD1-205ENST00000454244 POLR3DP05423 398 aaPredicted RBP13.03□□□□□ -0.32
LMCD1-205ENST00000454244 OSBPP22059 807 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 HOXD10P28358 340 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 ADD2P35612 726 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 PRMT2P55345 433 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 MTMR2Q13614 643 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 SH3D19Q5HYK7 790 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.03□□□□□ -0.32
LMCD1-205ENST00000454244 EHD4Q9H223 541 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 ARMT1Q9H993 441 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 ECHDC1Q9NTX5 307 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 GINM1Q9NU53 330 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 SRRDQ9UH36 339 aa13.03□□□□□ -0.32
LMCD1-205ENST00000454244 PNMA3Q9UL41 463 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms