RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 CDK5RAP2Q96SN8 1893 aa20.05■□□□□ 0.8
NCKIPSD-208ENST00000454134 ZSWIM8A7E2V4 1837 aa20.05■□□□□ 0.8
NCKIPSD-208ENST00000454134 TRIM75PA6NK02 468 aa20.05■□□□□ 0.8
NCKIPSD-208ENST00000454134 IFIT2P09913 472 aaKnown RBP20.05■□□□□ 0.8
NCKIPSD-208ENST00000454134 RRP1BQ14684 758 aaKnown RBP20.05■□□□□ 0.8
NCKIPSD-208ENST00000454134 ARHGAP39Q9C0H5 1083 aa20.05■□□□□ 0.8
NCKIPSD-208ENST00000454134 SAP30BPQ9UHR5 308 aaKnown RBP20.05■□□□□ 0.8
NCKIPSD-208ENST00000454134 PHIPQ8WWQ0 1821 aa20.04■□□□□ 0.8
NCKIPSD-208ENST00000454134 HTTP42858 3142 aa20.04■□□□□ 0.8
NCKIPSD-208ENST00000454134 A0A0G2JLL6 359 aaPredicted RBP20.04■□□□□ 0.8
NCKIPSD-208ENST00000454134 RAB11FIP3O75154 756 aa20.04■□□□□ 0.8
NCKIPSD-208ENST00000454134 SLC4A8Q2Y0W8 1093 aa20.04■□□□□ 0.8
NCKIPSD-208ENST00000454134 C17orf99Q6UX52 265 aa20.04■□□□□ 0.8
NCKIPSD-208ENST00000454134 GADL1Q6ZQY3 521 aa20.04■□□□□ 0.8
NCKIPSD-208ENST00000454134 PRRT2Q7Z6L0 340 aaPredicted RBP20.04■□□□□ 0.8
NCKIPSD-208ENST00000454134 PI4KBQ9UBF8 816 aa20.04■□□□□ 0.8
NCKIPSD-208ENST00000454134 PALD1Q9ULE6 856 aa20.04■□□□□ 0.8
NCKIPSD-208ENST00000454134 SIPA1L1O43166 1804 aa20.04■□□□□ 0.8
NCKIPSD-208ENST00000454134 IGSF3O75054 1194 aa20.03■□□□□ 0.8
NCKIPSD-208ENST00000454134 CYP2C8P10632 490 aa20.03■□□□□ 0.8
NCKIPSD-208ENST00000454134 LACTBP83111 547 aaPredicted RBP20.03■□□□□ 0.8
NCKIPSD-208ENST00000454134 MAP3K12Q12852 859 aa20.03■□□□□ 0.8
NCKIPSD-208ENST00000454134 DHX36Q9H2U1 1008 aaKnown RBP20.03■□□□□ 0.8
NCKIPSD-208ENST00000454134 ADGRA2Q96PE1 1338 aa20.02■□□□□ 0.8
NCKIPSD-208ENST00000454134 FOCADQ5VW36 1801 aa20.02■□□□□ 0.8
NCKIPSD-208ENST00000454134 CAP2P40123 477 aa20.02■□□□□ 0.8
NCKIPSD-208ENST00000454134 ARHGEF6Q15052 776 aa20.02■□□□□ 0.8
NCKIPSD-208ENST00000454134 FASTKD5Q7L8L6 764 aaKnown RBP20.02■□□□□ 0.8
NCKIPSD-208ENST00000454134 DNAJC2Q99543 621 aaKnown RBP20.02■□□□□ 0.8
NCKIPSD-208ENST00000454134 HERC5Q9UII4 1024 aaKnown RBP20.02■□□□□ 0.8
NCKIPSD-208ENST00000454134 PTPRFP10586 1907 aa20.02■□□□□ 0.79
NCKIPSD-208ENST00000454134 KIF22Q14807 665 aa20.01■□□□□ 0.79
NCKIPSD-208ENST00000454134 EDC3Q96F86 508 aaKnown RBP20.01■□□□□ 0.79
NCKIPSD-208ENST00000454134 PARK7Q99497 189 aaKnown RBP20.01■□□□□ 0.79
NCKIPSD-208ENST00000454134 DNAJC18Q9H819 358 aa20.01■□□□□ 0.79
NCKIPSD-208ENST00000454134 PTCH2Q9Y6C5 1203 aa20.01■□□□□ 0.79
NCKIPSD-208ENST00000454134 ATAD5Q96QE3 1844 aa20.01■□□□□ 0.79
NCKIPSD-208ENST00000454134 GOLIM4O00461 696 aa20■□□□□ 0.79
NCKIPSD-208ENST00000454134 CTGFP29279 349 aa20■□□□□ 0.79
NCKIPSD-208ENST00000454134 USP5P45974 858 aa20■□□□□ 0.79
NCKIPSD-208ENST00000454134 JAG1P78504 1218 aa20■□□□□ 0.79
NCKIPSD-208ENST00000454134 SPP2Q13103 211 aa20■□□□□ 0.79
NCKIPSD-208ENST00000454134 SHROOM1Q2M3G4 852 aaPredicted RBP20■□□□□ 0.79
NCKIPSD-208ENST00000454134 CRACR2BQ8N4Y2 399 aaPredicted RBP20■□□□□ 0.79
NCKIPSD-208ENST00000454134 SMARCA5O60264 1052 aaPredicted RBP19.99■□□□□ 0.79
NCKIPSD-208ENST00000454134 TTF1Q15361 905 aaPredicted RBP19.99■□□□□ 0.79
NCKIPSD-208ENST00000454134 SLC9C2Q5TAH2 1124 aa19.99■□□□□ 0.79
NCKIPSD-208ENST00000454134 FOXP4Q8IVH2 680 aaPredicted RBP19.99■□□□□ 0.79
NCKIPSD-208ENST00000454134 TRIM34Q9BYJ4 488 aa19.99■□□□□ 0.79
NCKIPSD-208ENST00000454134 BOLA2Q9H3K6 86 aa19.99■□□□□ 0.79
NCKIPSD-208ENST00000454134 PDE6AP16499 860 aa19.98■□□□□ 0.79
NCKIPSD-208ENST00000454134 PSMC4P43686 418 aa19.98■□□□□ 0.79
NCKIPSD-208ENST00000454134 TREML2Q5T2D2 321 aa19.98■□□□□ 0.79
NCKIPSD-208ENST00000454134 METTL16Q86W50 562 aaKnown RBP19.98■□□□□ 0.79
NCKIPSD-208ENST00000454134 ZNF280CQ8ND82 737 aa19.98■□□□□ 0.79
NCKIPSD-208ENST00000454134 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.98■□□□□ 0.79
NCKIPSD-208ENST00000454134 ARMC5Q96C12 935 aa19.98■□□□□ 0.79
NCKIPSD-208ENST00000454134 TRIM47Q96LD4 638 aa19.98■□□□□ 0.79
NCKIPSD-208ENST00000454134 TNRC18O15417 2968 aaPredicted RBP19.98■□□□□ 0.79
NCKIPSD-208ENST00000454134 POTEFA5A3E0 1075 aa19.97■□□□□ 0.79
NCKIPSD-208ENST00000454134 USP17L5A8MUK1 530 aa19.97■□□□□ 0.79
NCKIPSD-208ENST00000454134 GDF11O95390 407 aa19.97■□□□□ 0.79
NCKIPSD-208ENST00000454134 HLA-DOAP06340 250 aa19.97■□□□□ 0.79
NCKIPSD-208ENST00000454134 BCRP11274 1271 aa19.97■□□□□ 0.79
NCKIPSD-208ENST00000454134 RIOK1Q9BRS2 568 aaKnown RBP19.97■□□□□ 0.79
NCKIPSD-208ENST00000454134 LRRCC1Q9C099 1032 aa19.97■□□□□ 0.79
NCKIPSD-208ENST00000454134 AGTPBP1Q9UPW5 1226 aa19.97■□□□□ 0.79
NCKIPSD-208ENST00000454134 MYH1P12882 1939 aa19.96■□□□□ 0.79
NCKIPSD-208ENST00000454134 MAGEB6P1A0A0J9YX57 407 aa19.96■□□□□ 0.79
NCKIPSD-208ENST00000454134 FMNL1O95466 1100 aaPredicted RBP19.96■□□□□ 0.79
NCKIPSD-208ENST00000454134 ATP5JP18859 108 aa19.96■□□□□ 0.79
NCKIPSD-208ENST00000454134 HMGCS2P54868 508 aa19.96■□□□□ 0.79
NCKIPSD-208ENST00000454134 SLFNL1Q499Z3 407 aa19.96■□□□□ 0.79
NCKIPSD-208ENST00000454134 SLC9C1Q4G0N8 1177 aa19.96■□□□□ 0.79
NCKIPSD-208ENST00000454134 CERS3Q8IU89 383 aa19.96■□□□□ 0.79
NCKIPSD-208ENST00000454134 SLC45A1Q9Y2W3 748 aa19.96■□□□□ 0.79
NCKIPSD-208ENST00000454134 ZNF532Q9HCE3 1301 aa19.96■□□□□ 0.79
NCKIPSD-208ENST00000454134 CENPFP49454 3210 aa19.95■□□□□ 0.78
NCKIPSD-208ENST00000454134 MYCP01106 439 aaPredicted RBP19.95■□□□□ 0.78
NCKIPSD-208ENST00000454134 TMED8Q6PL24 325 aaPredicted RBP19.95■□□□□ 0.78
NCKIPSD-208ENST00000454134 SMCR8Q8TEV9 937 aaPredicted RBP19.95■□□□□ 0.78
NCKIPSD-208ENST00000454134 SH3TC2Q8TF17 1288 aa19.95■□□□□ 0.78
NCKIPSD-208ENST00000454134 YTHDC1Q96MU7 727 aaKnown RBP19.95■□□□□ 0.78
NCKIPSD-208ENST00000454134 PAG1Q9NWQ8 432 aa19.95■□□□□ 0.78
NCKIPSD-208ENST00000454134 TCRBV5S4A2TA0A5A2 114 aa19.94■□□□□ 0.78
NCKIPSD-208ENST00000454134 GNRH1P01148 92 aa19.94■□□□□ 0.78
NCKIPSD-208ENST00000454134 ASNSP08243 561 aa19.94■□□□□ 0.78
NCKIPSD-208ENST00000454134 OSBPP22059 807 aa19.94■□□□□ 0.78
NCKIPSD-208ENST00000454134 PROCA1Q8NCQ7 364 aaPredicted RBP19.94■□□□□ 0.78
NCKIPSD-208ENST00000454134 ZNF333Q96JL9 665 aa19.94■□□□□ 0.78
NCKIPSD-208ENST00000454134 HAUS7Q99871 368 aa19.94■□□□□ 0.78
NCKIPSD-208ENST00000454134 TBC1D2Q9BYX2 928 aa19.94■□□□□ 0.78
NCKIPSD-208ENST00000454134 AS3MTQ9HBK9 375 aa19.94■□□□□ 0.78
NCKIPSD-208ENST00000454134 ZBTB21Q9ULJ3 1066 aa19.94■□□□□ 0.78
NCKIPSD-208ENST00000454134 LOC285556D6RIA3 1793 aa19.93■□□□□ 0.78
NCKIPSD-208ENST00000454134 MTMR2Q13614 643 aa19.93■□□□□ 0.78
NCKIPSD-208ENST00000454134 WDR18Q9BV38 432 aa19.93■□□□□ 0.78
NCKIPSD-208ENST00000454134 SRRDQ9UH36 339 aa19.93■□□□□ 0.78
NCKIPSD-208ENST00000454134 CHGBP05060 677 aa19.92■□□□□ 0.78
NCKIPSD-208ENST00000454134 PLCD1P51178 756 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms