RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 TCP10Q12799 353 aa14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 TNFAIP1Q13829 316 aa14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 KIF4BQ2VIQ3 1234 aa14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 NBPF9Q3BBW0 867 aa14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 TBC1D10BQ4KMP7 808 aaPredicted RBP14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 RRP12Q5JTH9 1297 aaKnown RBP14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 SAMD7Q7Z3H4 446 aa14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 MB21D2Q8IYB1 491 aaPredicted RBP14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 ZNF444Q8N0Y2 327 aaPredicted RBP14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 STK11IPQ8N1F8 1099 aa14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 FBXL16Q8N461 479 aa14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 TMEM87BQ96K49 555 aa14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 ZSCAN31Q96LW9 406 aaPredicted RBP14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 INCENPQ9NQS7 918 aa14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 ZSWIM5Q9P217 1185 aa14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 LIMCH1Q9UPQ0 1083 aa14.79□□□□□ -0.04
HLA-DPA1-244ENST00000453337 GOLGB1Q14789 3259 aaKnown RBP14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 ROBO3Q96MS0 1386 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 CLRN2A0PK11 232 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 GLTPD2A6NH11 291 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 TCP10L2B9ZVM9 353 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 K7ELQ4 463 aaPredicted RBP14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 PRC1O43663 620 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 KDM4AO75164 1064 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 EPS15P42566 896 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 AK2P54819 239 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 SART3Q15020 963 aaKnown RBP14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 C16orf86Q6ZW13 317 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 ZFPM1Q8IX07 1006 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 EHD4Q9H223 541 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 VEZTQ9HBM0 779 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 ADARB2Q9NS39 739 aaKnown RBP14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 SWAP70Q9UH65 585 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 SERPINB13Q9UIV8 391 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 POLR2AP24928 1970 aaKnown RBP14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 MYH8P13535 1937 aa14.78□□□□□ -0.04
HLA-DPA1-244ENST00000453337 COL2A1P02458 1487 aaPredicted RBP14.77□□□□□ -0.04
HLA-DPA1-244ENST00000453337 NEDD4P46934 1319 aa14.77□□□□□ -0.04
HLA-DPA1-244ENST00000453337 RANBP6O60518 1105 aaKnown RBP14.77□□□□□ -0.05
HLA-DPA1-244ENST00000453337 CDK8P49336 464 aa14.77□□□□□ -0.05
HLA-DPA1-244ENST00000453337 Q6ZUG5 572 aa14.77□□□□□ -0.05
HLA-DPA1-244ENST00000453337 IQCA1Q86XH1 822 aa14.77□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TMTC2Q8N394 836 aa14.77□□□□□ -0.05
HLA-DPA1-244ENST00000453337 DYNLL2Q96FJ2 89 aa14.77□□□□□ -0.05
HLA-DPA1-244ENST00000453337 L3MBTL3Q96JM7 780 aaPredicted RBP14.77□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TRIM34Q9BYJ4 488 aa14.77□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TACC3Q9Y6A5 838 aa14.77□□□□□ -0.05
HLA-DPA1-244ENST00000453337 DDX60LQ5H9U9 1706 aaKnown RBP14.77□□□□□ -0.05
HLA-DPA1-244ENST00000453337 ATRNL1Q5VV63 1379 aa14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 ERICH2A1L162 156 aa14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 SMIM22K7EJ46 135 aa14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 CD2BP2O95400 341 aaKnown RBP14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 GABPAQ06546 454 aa14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 SLC4A8Q2Y0W8 1093 aa14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 CCDC178Q5BJE1 867 aa14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 CYB5R4Q7L1T6 521 aa14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 CRACR2BQ8N4Y2 399 aaPredicted RBP14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 CHMP4CQ96CF2 233 aa14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TCEANC2Q96MN5 208 aa14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 AGXT2Q9BYV1 514 aa14.76□□□□□ -0.05
HLA-DPA1-244ENST00000453337 DDTLA6NHG4 134 aaPredicted RBP14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TSPY2A6NKD2 308 aa14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 IFIT3O14879 490 aaKnown RBP14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 PRDM1O75626 825 aa14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 EGFRP00533 1210 aa14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 ANTXR2P58335 489 aa14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TOB2Q14106 344 aaPredicted RBP14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 SH3BP5LQ7L8J4 393 aa14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 CHST3Q7LGC8 479 aa14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 METTL16Q86W50 562 aaKnown RBP14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 APOBEC3FQ8IUX4 373 aaKnown RBP14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 IGDCC4Q8TDY8 1250 aa14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 UBAC1Q9BSL1 405 aa14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 SH2B1Q9NRF2 756 aaPredicted RBP14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 HACL1Q9UJ83 578 aa14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 SCN4AP35499 1836 aa14.75□□□□□ -0.05
HLA-DPA1-244ENST00000453337 IQCA1LA6NCM1 817 aa14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 LIFRP42702 1097 aa14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TFAP4Q01664 338 aa14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 EVX2Q03828 476 aa14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 COL9A3Q14050 684 aaPredicted RBP14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TMEM67Q5HYA8 995 aa14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 USP50Q70EL3 339 aaPredicted RBP14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 BRF1Q92994 677 aa14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TMX3Q96JJ7 454 aa14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 CCDC17Q96LX7 622 aa14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 LRRC2Q9BYS8 371 aa14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TCP11L1Q9NUJ3 509 aa14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 HERC5Q9UII4 1024 aaKnown RBP14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 ANGEL1Q9UNK9 670 aaKnown RBP14.74□□□□□ -0.05
HLA-DPA1-244ENST00000453337 CNTNAP1P78357 1384 aa14.73□□□□□ -0.05
HLA-DPA1-244ENST00000453337 PITPNM2Q9BZ72 1349 aa14.73□□□□□ -0.05
HLA-DPA1-244ENST00000453337 HSP90AA1P07900 732 aaKnown RBP14.73□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TSPY3P0CV98 308 aa14.73□□□□□ -0.05
HLA-DPA1-244ENST00000453337 TSPY8P0CW00 308 aa14.73□□□□□ -0.05
HLA-DPA1-244ENST00000453337 RASA1P20936 1047 aa14.73□□□□□ -0.05
HLA-DPA1-244ENST00000453337 EVCP57679 992 aa14.73□□□□□ -0.05
HLA-DPA1-244ENST00000453337 RASA3Q14644 834 aa14.73□□□□□ -0.05
HLA-DPA1-244ENST00000453337 WTAPQ15007 396 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms