RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 J3QW42 95 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 MSTNO14793 375 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 GHRHP01286 108 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 CHRNA4P43681 627 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 SIK1P57059 783 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 GRIK5Q16478 980 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 TMEM95Q3KNT9 176 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 INO80DQ53TQ3 878 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 CT47A1Q5JQC4 288 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 TRAPPC3LQ5T215 181 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 HDGFL2Q7Z4V5 671 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 CHPFQ8IZ52 775 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 IFNL3Q8IZI9 196 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 CHAC2Q8WUX2 184 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 CPLX3Q8WVH0 158 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 E2F7Q96AV8 911 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 PLD4Q96BZ4 506 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 SPON2Q9BUD6 331 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 RBSNQ9H1K0 784 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 ELP3Q9H9T3 547 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 AS3MTQ9HBK9 375 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 KCNG1Q9UIX4 513 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 STRIP2Q9ULQ0 834 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 POLIQ9UNA4 740 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 EFR3BQ9Y2G0 817 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 MRPS23Q9Y3D9 190 aaKnown RBP5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 USP31Q70CQ4 1352 aa5.52□□□□□ -1.53
HMGB3P21-201ENST00000452483 RPGRIP1LQ68CZ1 1315 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 A0A0A0MRY4 1105 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 A6NHS1 94 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 C1QTNF9BB2RNN3 333 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 RASGRP1O95267 797 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 MYL3P08590 195 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 VDRP11473 427 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 PMLP29590 882 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 FAM193AP78312 1265 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 TRIM28Q13263 835 aaKnown RBP5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 SQSTM1Q13501 440 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 TCEA2Q15560 299 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 TAF1CQ15572 869 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 C8orf34Q49A92 452 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 COL13A1Q5TAT6 717 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 MSL1Q68DK7 614 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 CCDC70Q6NSX1 233 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 GET4Q7L5D6 327 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 CD163Q86VB7 1156 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 DDX42Q86XP3 938 aaKnown RBP eCLIP5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 KIAA0825Q8IV33 1275 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 ENOX1Q8TC92 643 aaKnown RBP5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 TTC9Q92623 222 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 ANAPC16Q96DE5 110 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 CSRNP1Q96S65 589 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 CCDC113Q9H0I3 377 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 RSPH9Q9H1X1 276 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 MCM8Q9UJA3 840 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 LEMD3Q9Y2U8 911 aa5.51□□□□□ -1.53
HMGB3P21-201ENST00000452483 DYTNA2CJ06 578 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 CYP2E1P05181 493 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 IFIT2P09913 472 aaKnown RBP5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 FAM163BP0C2L3 166 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 RAC1P63000 192 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 HYAL2Q12891 473 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 ACBD5Q5T8D3 534 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 MEI1Q5TIA1 1274 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 WFDC8Q8IUA0 241 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 DMRTC2Q8IXT2 367 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 CCDC89Q8N998 374 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 TTC16Q8NEE8 873 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 TTC8Q8TAM2 541 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 FAM126AQ9BYI3 521 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 GGNBP2Q9H3C7 697 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 COPRSQ9NQ92 184 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 KANSL3Q9P2N6 904 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 PRKAG3Q9UGI9 489 aa5.5□□□□□ -1.53
HMGB3P21-201ENST00000452483 SLC26A4O43511 780 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 APBA3O96018 575 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 ELNP15502 786 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 ATP11AP98196 1134 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 NFKB2Q00653 900 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 MCL1Q07820 350 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 DALRD3Q5D0E6 543 aaKnown RBP5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 GDF6Q6KF10 455 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 XKR5Q6UX68 686 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 ERMP1Q7Z2K6 904 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 SMAP1Q8IYB5 467 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 FMR1NBQ8N0W7 255 aaPredicted RBP5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 GJD3Q8N144 294 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 NACC1Q96RE7 527 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 PTPRHQ9HD43 1115 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 ZIM2Q9NZV7 527 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 TAGLN3Q9UI15 199 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 TRIM33Q9UPN9 1127 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 PLAAQ9Y263 795 aa5.49□□□□□ -1.53
HMGB3P21-201ENST00000452483 WASHC2CQ9Y4E1 1318 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 BTBD11A6QL63 1104 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 KCNQ2O43526 872 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 ASMTLO95671 621 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 CASP2P42575 452 aa5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 PPM1FP49593 454 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P21-201ENST00000452483 RAB27AP51159 221 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms