RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 HOXD10P28358 340 aa16.76■□□□□ 0.27
TOM1-211ENST00000449508 CTGFP29279 349 aa16.76■□□□□ 0.27
TOM1-211ENST00000449508 ERC1Q8IUD2 1116 aa16.76■□□□□ 0.27
TOM1-211ENST00000449508 SH3TC2Q8TF17 1288 aa16.76■□□□□ 0.27
TOM1-211ENST00000449508 TGFBRAP1Q8WUH2 860 aa16.76■□□□□ 0.27
TOM1-211ENST00000449508 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
TOM1-211ENST00000449508 COL2A1P02458 1487 aaPredicted RBP16.75■□□□□ 0.27
TOM1-211ENST00000449508 RBBP6Q7Z6E9 1792 aaKnown RBP16.75■□□□□ 0.27
TOM1-211ENST00000449508 CENPFP49454 3210 aa16.75■□□□□ 0.27
TOM1-211ENST00000449508 IGSF3O75054 1194 aa16.75■□□□□ 0.27
TOM1-211ENST00000449508 CAP2P40123 477 aa16.75■□□□□ 0.27
TOM1-211ENST00000449508 SLC4A8Q2Y0W8 1093 aa16.75■□□□□ 0.27
TOM1-211ENST00000449508 PRPF38BQ5VTL8 546 aaKnown RBP16.75■□□□□ 0.27
TOM1-211ENST00000449508 ADGRA1Q86SQ6 560 aa16.75■□□□□ 0.27
TOM1-211ENST00000449508 MAPKAPK5Q8IW41 473 aa16.75■□□□□ 0.27
TOM1-211ENST00000449508 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
TOM1-211ENST00000449508 PIH1D3Q9NQM4 214 aaKnown RBP16.75■□□□□ 0.27
TOM1-211ENST00000449508 PI4KBQ9UBF8 816 aa16.75■□□□□ 0.27
TOM1-211ENST00000449508 SRRDQ9UH36 339 aa16.75■□□□□ 0.27
TOM1-211ENST00000449508 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
TOM1-211ENST00000449508 MAST2Q6P0Q8 1798 aa16.74■□□□□ 0.27
TOM1-211ENST00000449508 CDK5RAP2Q96SN8 1893 aa16.74■□□□□ 0.27
TOM1-211ENST00000449508 IDH1O75874 414 aaKnown RBP16.74■□□□□ 0.27
TOM1-211ENST00000449508 BCRP11274 1271 aa16.74■□□□□ 0.27
TOM1-211ENST00000449508 OSBPP22059 807 aa16.74■□□□□ 0.27
TOM1-211ENST00000449508 CYP7A1P22680 504 aa16.74■□□□□ 0.27
TOM1-211ENST00000449508 SPP2Q13103 211 aa16.74■□□□□ 0.27
TOM1-211ENST00000449508 AACSQ86V21 672 aa16.74■□□□□ 0.27
TOM1-211ENST00000449508 SLC45A1Q9Y2W3 748 aa16.74■□□□□ 0.27
TOM1-211ENST00000449508 ATAD5Q96QE3 1844 aa16.74■□□□□ 0.27
TOM1-211ENST00000449508 FCGRTP55899 365 aa16.73■□□□□ 0.27
TOM1-211ENST00000449508 DYNLL1P63167 89 aaKnown RBP16.73■□□□□ 0.27
TOM1-211ENST00000449508 RRP1BQ14684 758 aaKnown RBP16.73■□□□□ 0.27
TOM1-211ENST00000449508 HSP90AB4PQ58FF6 505 aa16.73■□□□□ 0.27
TOM1-211ENST00000449508 ZNF280CQ8ND82 737 aa16.73■□□□□ 0.27
TOM1-211ENST00000449508 RAET1EQ8TD07 263 aa16.73■□□□□ 0.27
TOM1-211ENST00000449508 SMCR8Q8TEV9 937 aaPredicted RBP16.73■□□□□ 0.27
TOM1-211ENST00000449508 NDUFB9Q9Y6M9 179 aa16.73■□□□□ 0.27
TOM1-211ENST00000449508 MGAMO43451 1857 aa16.73■□□□□ 0.27
TOM1-211ENST00000449508 USP17L5A8MUK1 530 aa16.72■□□□□ 0.27
TOM1-211ENST00000449508 FOXP4Q8IVH2 680 aaPredicted RBP16.72■□□□□ 0.27
TOM1-211ENST00000449508 RPAP2Q8IXW5 612 aaPredicted RBP16.72■□□□□ 0.27
TOM1-211ENST00000449508 CRACR2BQ8N4Y2 399 aaPredicted RBP16.72■□□□□ 0.27
TOM1-211ENST00000449508 RHPN1Q8TCX5 695 aa16.72■□□□□ 0.27
TOM1-211ENST00000449508 TRIM34Q9BYJ4 488 aa16.72■□□□□ 0.27
TOM1-211ENST00000449508 TBC1D2Q9BYX2 928 aa16.72■□□□□ 0.27
TOM1-211ENST00000449508 IL1RAPL2Q9NP60 686 aa16.72■□□□□ 0.27
TOM1-211ENST00000449508 PALD1Q9ULE6 856 aa16.72■□□□□ 0.27
TOM1-211ENST00000449508 DDX19BQ9UMR2 479 aa16.72■□□□□ 0.27
TOM1-211ENST00000449508 AGTPBP1Q9UPW5 1226 aa16.72■□□□□ 0.27
TOM1-211ENST00000449508 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
TOM1-211ENST00000449508 FLT1P17948 1338 aa16.71■□□□□ 0.27
TOM1-211ENST00000449508 MYPNQ86TC9 1320 aa16.71■□□□□ 0.27
TOM1-211ENST00000449508 FOCADQ5VW36 1801 aa16.71■□□□□ 0.27
TOM1-211ENST00000449508 APBB1O00213 710 aa16.71■□□□□ 0.27
TOM1-211ENST00000449508 TREML2Q5T2D2 321 aa16.71■□□□□ 0.27
TOM1-211ENST00000449508 MAGEB6Q8N7X4 407 aa16.71■□□□□ 0.27
TOM1-211ENST00000449508 MIGA1Q8NAN2 632 aa16.71■□□□□ 0.27
TOM1-211ENST00000449508 PROCA1Q8NCQ7 364 aaPredicted RBP16.71■□□□□ 0.27
TOM1-211ENST00000449508 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
TOM1-211ENST00000449508 AS3MTQ9HBK9 375 aa16.71■□□□□ 0.27
TOM1-211ENST00000449508 HMMRO75330 724 aa16.7■□□□□ 0.26
TOM1-211ENST00000449508 GRK4P32298 578 aa16.7■□□□□ 0.26
TOM1-211ENST00000449508 HMGCS2P54868 508 aa16.7■□□□□ 0.26
TOM1-211ENST00000449508 MAP3K12Q12852 859 aa16.7■□□□□ 0.26
TOM1-211ENST00000449508 BCL11AQ9H165 835 aa16.7■□□□□ 0.26
TOM1-211ENST00000449508 BIN2Q9UBW5 565 aaPredicted RBP16.7■□□□□ 0.26
TOM1-211ENST00000449508 SAP30BPQ9UHR5 308 aaKnown RBP16.7■□□□□ 0.26
TOM1-211ENST00000449508 RCAN3Q9UKA8 241 aa16.7■□□□□ 0.26
TOM1-211ENST00000449508 PNMA3Q9UL41 463 aa16.7■□□□□ 0.26
TOM1-211ENST00000449508 SIPA1L1O43166 1804 aa16.7■□□□□ 0.26
TOM1-211ENST00000449508 MYH1P12882 1939 aa16.69■□□□□ 0.26
TOM1-211ENST00000449508 HLA-DOAP06340 250 aa16.69■□□□□ 0.26
TOM1-211ENST00000449508 ASNSP08243 561 aa16.69■□□□□ 0.26
TOM1-211ENST00000449508 USP5P45974 858 aa16.69■□□□□ 0.26
TOM1-211ENST00000449508 PRKCZQ05513 592 aa16.69■□□□□ 0.26
TOM1-211ENST00000449508 PABPC4Q13310 644 aaKnown RBP eCLIP16.69■□□□□ 0.26
TOM1-211ENST00000449508 MTFR1Q15390 333 aa16.69■□□□□ 0.26
TOM1-211ENST00000449508 CERS3Q8IU89 383 aa16.69■□□□□ 0.26
TOM1-211ENST00000449508 CLASRPQ8N2M8 674 aaKnown RBP16.69■□□□□ 0.26
TOM1-211ENST00000449508 CHMP4BQ9H444 224 aaKnown RBP16.69■□□□□ 0.26
TOM1-211ENST00000449508 ZBTB40Q9NUA8 1239 aa16.69■□□□□ 0.26
TOM1-211ENST00000449508 GABRQQ9UN88 632 aa16.69■□□□□ 0.26
TOM1-211ENST00000449508 SH3D19Q5HYK7 790 aa16.68■□□□□ 0.26
TOM1-211ENST00000449508 METTL16Q86W50 562 aaKnown RBP16.68■□□□□ 0.26
TOM1-211ENST00000449508 SIRT2Q8IXJ6 389 aa16.68■□□□□ 0.26
TOM1-211ENST00000449508 ANKRD13CQ8N6S4 541 aa16.68■□□□□ 0.26
TOM1-211ENST00000449508 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
TOM1-211ENST00000449508 WDR18Q9BV38 432 aa16.68■□□□□ 0.26
TOM1-211ENST00000449508 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
TOM1-211ENST00000449508 DOCK3Q8IZD9 2030 aa16.67■□□□□ 0.26
TOM1-211ENST00000449508 TNPO2O14787 897 aaKnown RBP16.67■□□□□ 0.26
TOM1-211ENST00000449508 GDF11O95390 407 aa16.67■□□□□ 0.26
TOM1-211ENST00000449508 SLC34A2O95436 690 aa16.67■□□□□ 0.26
TOM1-211ENST00000449508 IFIT2P09913 472 aaKnown RBP16.67■□□□□ 0.26
TOM1-211ENST00000449508 JAG1P78504 1218 aa16.67■□□□□ 0.26
TOM1-211ENST00000449508 TTF1Q15361 905 aaPredicted RBP16.67■□□□□ 0.26
TOM1-211ENST00000449508 TMED8Q6PL24 325 aaPredicted RBP16.67■□□□□ 0.26
TOM1-211ENST00000449508 LOC285556D6RIA3 1793 aa16.66■□□□□ 0.26
TOM1-211ENST00000449508 RAB11FIP3O75154 756 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms