RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 TBC1D16Q8TBP0 767 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 ANO3Q9BYT9 981 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 RGS12O14924 1447 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 PER1O15534 1290 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 CCDC82Q8N4S0 544 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 GLIS2Q9BZE0 524 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 NBPF26B4DH59 902 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 ABL1P00519 1130 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 CALML3P27482 149 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 DNM2P50570 870 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 HAND2P61296 217 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 GPSM2P81274 684 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 CXCL9Q07325 125 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 TSR1Q2NL82 804 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 MRPL50Q8N5N7 158 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 MYOZ2Q9NPC6 264 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 SMC3Q9UQE7 1217 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 ELMOD1Q8N336 334 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 RGS22Q8NE09 1264 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 RBM46Q8TBY0 533 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 SYNDIG1Q9H7V2 258 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 SETBP1Q9Y6X0 1596 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 ABCC4O15439 1325 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 WTAPQ15007 396 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 RGMBQ6NW40 437 aa6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 WDR33Q9C0J8 1336 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-209ENST00000448940 EXOC6Q8TAG9 804 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 KLHDC4Q8TBB5 520 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 LRRC4BQ9NT99 713 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 LRRIQ1Q96JM4 1722 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 USP17L5A8MUK1 530 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 ALAS1P13196 640 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 GNPTABQ3T906 1256 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 IGFLR1Q9H665 355 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 TRPC6Q9Y210 931 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 LAMC1P11047 1609 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 POTEB2H3BUK9 544 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 RNF113AO15541 343 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 TPM4P67936 248 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 TMEM266Q2M3C6 531 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 NBPF9Q3BBW0 867 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 ERICH6BQ5W0A0 696 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 TTLL11Q8NHH1 800 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 NCOA7Q8NI08 942 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 C6orf50Q9HD87 102 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 RTN4Q9NQC3 1192 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 MINPP1Q9UNW1 487 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 KDRP35968 1356 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 POLRMTO00411 1230 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 CCDC102BQ68D86 513 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 CTU1Q7Z7A3 348 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 DEFB129Q9H1M3 183 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 MTUS1Q9ULD2 1270 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 VPS37CA5D8V6 355 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 M0R2C6 588 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 DMWDQ09019 674 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 PPP2R5DQ14738 602 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 PRAMEF18Q5VWM3 479 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 SYMPKQ92797 1274 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 ADCY9O60503 1353 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 MARCKSP29966 332 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 GTF3C2Q8WUA4 911 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 PKD2L1Q9P0L9 805 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 SERPINB13Q9UIV8 391 aa6.48□□□□□ -1.37
CDC42BPA-209ENST00000448940 GOLGA8AA7E2F4 631 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 GOLGA8BA8MQT2 603 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 NONOQ15233 471 aaKnown RBP eCLIP6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 CCDC148Q8NFR7 591 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 GLT1D1Q96MS3 346 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 C22orf23Q9BZE7 217 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 HOXC10Q9NYD6 342 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 ODR4Q5SWX8 454 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 DBNDD2Q9BQY9 259 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 SLC28A3Q9HAS3 691 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 GPCPD1Q9NPB8 672 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 MROH1Q8NDA8 1641 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 PARP1P09874 1014 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 SPP2Q13103 211 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 SF3B3Q15393 1217 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 TNNI3KQ59H18 835 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 ARHGEF16Q5VV41 709 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 DPF2Q92785 391 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 RRP36Q96EU6 259 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 FPGT-TNNI3KV9GXZ4 949 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 E9PCH4 1651 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 SMARCA5O60264 1052 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 UTP14CQ5TAP6 766 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 ZC3H15Q8WU90 426 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 RPS6KC1Q96S38 1066 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 FBXO40Q9UH90 709 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 PQBP1O60828 265 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 NBPF7P0C2Y1 421 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 GNAT1P11488 350 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 NEFHP12036 1026 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 COPB2P35606 906 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 TRIM28Q13263 835 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 ARPP21Q9UBL0 812 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 CLIP2Q9UDT6 1046 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 FCHSD1Q86WN1 690 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 ANKRD20A12PQ8NF67 263 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms